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Group Product Lists by Category in Sidebar #203

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2 changes: 1 addition & 1 deletion blog/2024-07-31-IT-Update.md
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Expand Up @@ -13,7 +13,7 @@ We're excited to share some recent developments and updates from CIROH's Researc

- CIROH's Google Cloud Account is now fully operational and managed by our team. You can find more information [here.](https://docs.ciroh.org/docs/services/cloudservices/google%20cloud/)
- We're in the process of migrating our 2i2c JupyterHub to CIROH's Google Cloud account.
- We've successfully deployed the Google BigQuery API (developed by BYU and Google) for NWM data in our cloud. To access this API, please contact us at [email protected]. Please refer to [NWM BigQuery API](https://docs.ciroh.org/docs/products/bigqeury-api/) to learn more.
- We've successfully deployed the Google BigQuery API (developed by BYU and Google) for NWM data in our cloud. To access this API, please contact us at [email protected]. Please refer to [NWM BigQuery API](https://docs.ciroh.org/docs/products/Data%20Management%20and%20Access%20Tools/bigqeury-api/) to learn more.

### Support and Services
- Monthly AWS office hours are ongoing. For more details on how to join, email us at [email protected].
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4 changes: 2 additions & 2 deletions blog/2024-2-29-NextGen-Update-Monthly.md
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Expand Up @@ -18,10 +18,10 @@ Our team has been hard at work enhancing CIROH's Infrastructure and Community Ne

2. For NGIAB, we've made improvements to the CI pipeline for pull requests submitted with forked repositories. Now, we automatically build and test these submissions using the CI pipeline.

3. We've added documentation for the NWMURL python package, which offers utility functions tailored for accessing National Water Model (NWM) data URLs. This library streamlines the process of accessing NWM data for various purposes, including analysis, modeling, and visualization. You can explore the documentation [here](/docs/products/dataaccess).
3. We've added documentation for the NWMURL python package, which offers utility functions tailored for accessing National Water Model (NWM) data URLs. This library streamlines the process of accessing NWM data for various purposes, including analysis, modeling, and visualization. You can explore the documentation [here](/docs/products/Data%20Management%20and%20Access%20Tools/dataaccess/).

4. We're thrilled to announce the NextGen Track for DevCon24. The schedule is now available at: [DevCon24 Schedule](https://ciroh.ua.edu/devconference/).

Thank you for your ongoing interest and support in the Community NextGen project. Stay tuned for more exciting updates and developments next month. 😊

[Click Here to Visit Community NextGen and NGIAB News from Feb 2024](/docs/products/community-nextgen/nextgeninaboxDocker/)
[Click Here to Visit Community NextGen and NGIAB News from Feb 2024](https://docs.ciroh.org/news/)
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---
sidebar_position: 2
title: "Community NextGen"
title: "Community Hydrologic Modeling Framework"
description: "Community NextGen"
tags:
- NextGen In A Box
Expand All @@ -16,4 +16,10 @@ tags:
- Singularity
---

Community NextGen is a community-accessible verison of NextGen Water Resources Modeling Framework ([NextGen](https://github.com/NOAA-OWP/ngen)). It simplifies deployment with a one-click containerization. NGIAB offers both Docker-based cloud infrastructure ([NGIAB-CloudInfra](https://github.com/CIROH-UA/NGIAB-CloudInfra/blob/main/README.md)) and Singularity-based high-performance computing ([NGIAB-HPCInfra](https://github.com/CIROH-UA/NGIAB-HPCInfra/blob/main/README.md)). NGIAB includes essential tools such as [Data Preprocess](https://github.com/CIROH-UA/NGIAB_data_preprocess/blob/main/README.md), which simplifies data preparation with its interactive map, and [Data Visualizer](https://github.com/CIROH-UA/ngiab-client), which provides geospatial and time series visualization. With [NextGen Datastream](https://github.com/CIROH-UA/ngen-datastream/blob/main/README.md) you can build and validate NextGen input packages, execute NextGen through NGIAB and verison the entire run for reproducibility.
Community NextGen is a community-accessible verison of NextGen Water Resources Modeling Framework ([NextGen](https://github.com/NOAA-OWP/ngen)). It simplifies deployment with a one-click containerization. NGIAB offers both Docker-based cloud infrastructure ([NGIAB-CloudInfra](https://github.com/CIROH-UA/NGIAB-CloudInfra/blob/main/README.md)) and Singularity-based high-performance computing ([NGIAB-HPCInfra](https://github.com/CIROH-UA/NGIAB-HPCInfra/blob/main/README.md)). NGIAB includes essential tools such as [Data Preprocess](https://github.com/CIROH-UA/NGIAB_data_preprocess/blob/main/README.md), which simplifies data preparation with its interactive map, and [Data Visualizer](https://github.com/CIROH-UA/ngiab-client), which provides geospatial and time series visualization. With [NextGen Datastream](https://github.com/CIROH-UA/ngen-datastream/blob/main/README.md) you can build and validate NextGen input packages, execute NextGen through NGIAB and verison the entire run for reproducibility.

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14 changes: 14 additions & 0 deletions docs/products/Data Management and Access Tools/index.md
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sidebar_position: 4
title: "Data Management and Access Tools"
description: "Data Management and Access Tools"
tags:
- CSES
- TEEHR
---

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Expand Up @@ -18,7 +18,7 @@ Another way to access the testbed is through the Secure Shell Protocol, more com
The `/netfiles/ciroh/` directory on the NETWA has over 40 terabytes of disk space that researchers can use to store data - that's equivalent to 40 million megabytes! Needless to say, there's plenty of space for data. If you have data you'd like to store here, please create your own directroy titled after your netID. For example, "John Smith" would store their data under `/netfiles/ciroh/jsmith`.

## Setting up Mamba
[Mamba](https://mamba.readthedocs.io/en/latest/index.html) is a lightweight version of [Conda](https://docs.conda.io/projects/conda/en/stable/), a popular package manager for a variety of programming languages. It is used on the testbed to set up virtual environments that contain all of the relevant packages and dependencies for a given software repository or workflow. There are a few existing mamba environments on the testbed already, such as one that houses all of the packages necessary to run the forecast-workflow repo (more specific instructions for accessing that [here](https://docs.ciroh.org/docs/products/netwa/forecast-workflow)). This section will demonstrate how to initalize mamba for a new user and how to see what virtual enviornments are available
[Mamba](https://mamba.readthedocs.io/en/latest/index.html) is a lightweight version of [Conda](https://docs.conda.io/projects/conda/en/stable/), a popular package manager for a variety of programming languages. It is used on the testbed to set up virtual environments that contain all of the relevant packages and dependencies for a given software repository or workflow. There are a few existing mamba environments on the testbed already, such as one that houses all of the packages necessary to run the forecast-workflow repo (more specific instructions for accessing that [here](https://docs.ciroh.org/docs/products/Data%20Management%20and%20Access%20Tools/netwa/)). This section will demonstrate how to initalize mamba for a new user and how to see what virtual enviornments are available
1. On the testbed, open a terminal and run the following command: `/usr/local/mambaforge/bin/mamba init`
1. *Note:* you only have to do this once, not every time you open a new terminal or want to use mamba
2. If the command ran successfully, you should see something like this now at the command line:
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sidebar_position: 6
sidebar_position: 1
title: "CSES"
description: "Community Streamflow Evaluation System"
tags:
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14 changes: 14 additions & 0 deletions docs/products/Evaluation Tools/index.md
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sidebar_position: 3
title: "Evaluation Tools"
description: "Evaluation Tools"
tags:
- CSES
- TEEHR
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14 changes: 14 additions & 0 deletions docs/products/Machine Learning and AI Tools/index.md
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sidebar_position: 5
title: "Machine Learning and AI Tools"
description: "Machine Learning and AI Tools"
tags:
- CSES
- TEEHR
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15 changes: 15 additions & 0 deletions docs/products/Visualization and Analysis Tools/index.md
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sidebar_position: 6
title: "Visualization and Analysis Tools"
description: "Visualization and Analysis Tools"
tags:
- CSES
- TEEHR
---


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