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@CIDA-CSPH

University of Colorado Anschutz - Center for Innovative Design and Analysis

The Center for Innovative Design and Analysis GitHub Organization

This is the main GitHub page for the Center for Innovative Design and Analysis (CIDA) at the Colorado School of Public Health (CSPH). In order to be invited to CIDA-CSPH, please contact Camille Hochheimer, Ryan Peterson, or Max McGrath.

How to organize project repositories (PRs)

  • Each PR should be nested in Teams [and prefixed by the team name or abbreviation?]
  • Each PR should have all subdirectories one would expect for a project: Admin, Background, Code, DataProcessed, DataRaw, Dissemination, and Reports
  • Each PR should have a readme.md file
  • Each PR should have a .gitignore file which tells Git not to track data and other large binary files

Upcoming Brown Bag Seminars

Occur once a month on the second Tuesday of the month at noon. Recordings are saved at ~Shared/programming_lunch_seminars

Date Topic Presenter
November 14 Tech Support "Office Hours" (including GitHub questions)
December 12 Discussion on Large Language Models (i.e. Chat GPT) Mansooreh Ahmadian
January 9 Parallel Processing in R Max McGrath
March 12 Python Panel Chris Mancuso, Mengli Xiao
May 14 Structural Equations Rachel Johnson
June 11 Tidyverse Conner Jackson

Please send any topic requests to Grace Bosma

Useful team resources on Git/GitHub

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  1. CIDAtools CIDAtools Public

    Project and coding tools for the Center for Innovative Design and Analysis (CIDA)

    R 9 5

Repositories

Showing 10 of 14 repositories
  • MONET-Material-2025 Public

    This repo will hold the material from the MONET workshop in 2025

    CIDA-CSPH/MONET-Material-2025’s past year of commit activity
    0 0 0 0 Updated Dec 17, 2024
  • CIDAtools Public

    Project and coding tools for the Center for Innovative Design and Analysis (CIDA)

    CIDA-CSPH/CIDAtools’s past year of commit activity
    R 9 5 9 0 Updated Dec 10, 2024
  • sierra-ecg-tools Public Forked from sixlettervariables/sierra-ecg-tools

    Tools to work with the Philips Sierra ECG XML format

    CIDA-CSPH/sierra-ecg-tools’s past year of commit activity
    Java 0 MIT 34 0 0 Updated Oct 30, 2024
  • Pulmonary_Sharma_Vaping Public

    This is the repository for Sunita Sharma's adolescent vaping study. Specifically, -Omics analyses.

    CIDA-CSPH/Pulmonary_Sharma_Vaping’s past year of commit activity
    HTML 0 0 0 0 Updated Oct 29, 2024
  • .github Public
    CIDA-CSPH/.github’s past year of commit activity
    0 0 0 0 Updated May 16, 2024
  • CIDA-CSPH/publication-project’s past year of commit activity
    HTML 0 0 0 0 Updated Apr 17, 2024
  • Waldrop_P21002Borengasser_CBMethylationDMRsMEs Public

    This repository documents the code used to analyze the data for "Cord Blood DNA Methylation of Differentially Methylated Regions Associates with Infant and Child adiposity”, including some descriptions of QC/batch correction and comb-p

    CIDA-CSPH/Waldrop_P21002Borengasser_CBMethylationDMRsMEs’s past year of commit activity
    R 0 0 0 0 Updated Apr 8, 2024
  • CIDA-CSPH/toggl_timetrack’s past year of commit activity
    HTML 0 0 0 0 Updated Mar 11, 2024
  • CHEST-CRITCARE-D-23-00091 Public

    Manuscript under review (CHEST-CRITCARE-D-23-00091)

    CIDA-CSPH/CHEST-CRITCARE-D-23-00091’s past year of commit activity
    HTML 0 0 0 0 Updated Dec 7, 2023
  • CIDA-CSPH/ADC_Bettcher_LIIA’s past year of commit activity
    R 0 0 0 0 Updated Oct 12, 2023

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