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Releases: CCBR/nf-modules

nf-modules 0.1.0

29 Nov 20:00
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Our documentation website is now live: https://ccbr.github.io/nf-modules/ (#16)

New modules

  • bwa/index
  • bwa/mem
    • also runs samtools sort & outputs index in bai format. (#12)
  • custom/bam2fastq (#14,#22)
  • custom/convertsicer (#36)
  • custom/countfastq (#32)
  • cutadapt (#11)
  • khmer/uniquekmers (#7)
  • picard/samtofastq (#21)
  • samtools/filteraligned (#13,#20)
  • samtools/sort (#24,#28)

New subworkflows

  • custom/filter_blacklist (#17,#27)