chore: Merge branch 'script-paths' into docker

CCBR · Feb 7, 2024 · 09a15b4 · 09a15b4
2 parents 78a7d93 + ed58bbc
commit 09a15b4
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Showing 3 changed files with 7 additions and 7 deletions.
diff --git a/RECAP_MACS.sh b/RECAP_MACS.sh
@@ -35,8 +35,8 @@
 VERSION="1.0.2"     
 # Provide a variable for the location of this and other scripts
 SCRIPT_PATH="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
-REMIX_PATH=$(find ~/ -type f -name "RECAP_Re-Mix.sh" | head -n 1)
-PERL_PATH=$(find ~/ -type f -name "RECAP.pl" | head -n 1)
+REMIX_PATH=${SCRIPT_PATH}/RECAP_Re-Mix.sh
+PERL_PATH=${SCRIPT_PATH}/RECAP.pl
 # Text display commands
 bold=$(tput bold)
 normal=$(tput sgr0)

diff --git a/RECAP_SICER.sh b/RECAP_SICER.sh
@@ -35,9 +35,9 @@
 VERSION="1.0.2"     
 # Provide a variable for the location of this and other scripts
 SCRIPT_PATH="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
-REMIX_PATH=$(find ~/ -type f -name "RECAP_Re-Mix.sh" | head -n 1)
-PERL_PATH=$(find ~/ -type f -name "RECAP.pl" | head -n 1)
-SICER_PATH=$(find ~/ -type f -name "SICER.sh" | head -n 1)
+REMIX_PATH=${SCRIPT_PATH}/RECAP_Re-Mix.sh
+PERL_PATH=${SCRIPT_PATH}/RECAP.pl
+SICER_PATH=$(which SICER.sh)
 # Text display commands
 bold=$(tput bold)
 normal=$(tput sgr0)

diff --git a/RECAP_diffReps.sh b/RECAP_diffReps.sh
@@ -35,8 +35,8 @@
 VERSION="1.0.2"     
 # Provide a variable for the location of this and other scripts
 SCRIPT_PATH="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
-REMIX_PATH=$(find ~/ -type f -name "RECAP_Re-Mix.sh" | head -n 1)
-PERL_PATH=$(find ~/ -type f -name "RECAP.pl" | head -n 1)
+REMIX_PATH=${SCRIPT_PATH}/RECAP_Re-Mix.sh
+PERL_PATH=${SCRIPT_PATH}/RECAP.pl
 # Text display commands
 bold=$(tput bold)
 normal=$(tput sgr0)