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feat: turn on timeline & trace
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kelly-sovacool committed Nov 25, 2024
1 parent 5a101fd commit 57e8eb1
Showing 1 changed file with 13 additions and 8 deletions.
21 changes: 13 additions & 8 deletions nextflow.config
Original file line number Diff line number Diff line change
Expand Up @@ -61,17 +61,22 @@ env {
process.shell = ['/bin/bash', '-euo', 'pipefail']

def trace_timestamp = new java.util.Date().format('yyyy-MM-dd_HH-mm-ss')
dag {
enabled = true
overwrite = true
file = "${params.outdir}/pipeline_info/pipeline_dag_${trace_timestamp}.html"
timeline {
enabled = true
file = "${params.outdir}/pipeline_info/execution_timeline_${trace_timestamp}.html"
}
report {
enabled = true
overwrite = true
file = "${params.outdir}/pipeline_info/execution_report_${trace_timestamp}.html"
enabled = true
file = "${params.outdir}/pipeline_info/execution_report_${trace_timestamp}.html"
}
trace {
enabled = true
file = "${params.outdir}/pipeline_info/execution_trace_${trace_timestamp}.txt"
}
dag {
enabled = true
file = "${params.outdir}/pipeline_info/pipeline_dag_${trace_timestamp}.png"
}

includeConfig 'conf/modules.config'

manifest {
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