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Fixed parent classes for brain activation maps
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@adbartni
adbartni committed Oct 22, 2024
1 parent 14bb32c commit cc3aa6f
Showing 1 changed file with 118 additions and 143 deletions.
261 changes: 118 additions & 143 deletions src/ontology/MRIO-edit.owl
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Expand Up @@ -4981,94 +4981,7 @@ The values often belong to a group of pixels or voxels that share the same chara



<!-- http://purl.obolibrary.org/obo/MRIO_1000024 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000024">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000453"/>
<IAO_0000115>A measure function that models the temporal changes in brain blood flow and oxygenation in response to neural activity.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:26:45Z</dc:date>
<oboInOwl:hasExactSynonym>HRF</oboInOwl:hasExactSynonym>
<rdfs:label xml:lang="en">hemodynamic response function</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000025 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000025">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000024"/>
<IAO_0000115>A standard model of the hemodynamic response function (HRF) that represents the typical temporal changes in brain blood flow and oxygenation in response to neural activity, used as a reference in neuroimaging studies to interpret brain activation patterns.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:27:39Z</dc:date>
<oboInOwl:hasExactSynonym>canonical HRF</oboInOwl:hasExactSynonym>
<rdfs:label xml:lang="en">canonical hemodynamic response function</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000026 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000026">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UO_0000095"/>
<IAO_0000115>A volume unit in a three-dimensional imaging system that represents a discrete cubic or rectangular portion of space.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:38:57Z</dc:date>
<rdfs:label xml:lang="en">voxel</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000027 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000027">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000026"/>
<IAO_0000115>A specific voxel selected as a starting point for examining or analyzing three-dimensional data.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:39:07Z</dc:date>
<rdfs:label xml:lang="en">seed voxel</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000028 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000028">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000028"/>
<IAO_0000115>A three-dimensional spatial region defined by a cluster of contiguous voxels used as the starting point for examining or analyzing three-dimensional data.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:41:46Z</dc:date>
<rdfs:label xml:lang="en">seed region</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000029 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000029">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0003327"/>
<IAO_0000115>An image data set in which all images are acquired or aligned within the same plane of reference.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T18:08:58Z</dc:date>
<rdfs:label xml:lang="en">coplaner image data set</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000050 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000050">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO:0008015"/>
<IAO_0000115>Blood circulation that is increased in the brain, in response to neural activity.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-08-05T20:00:54Z</dc:date>
<oboInOwl:hasExactSynonym>HR</oboInOwl:hasExactSynonym>
<rdfs:label xml:lang="en">hemodynamic response</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_70c96d29_5436_43de_b9ac_d85cea3f2ead -->
<!-- http://purl.obolibrary.org/obo/MRIO_1000000 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000000">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000032"/>
Expand Down Expand Up @@ -5146,7 +5059,7 @@ The values often belong to a group of pixels or voxels that share the same chara
<IAO_0000115>A data item that is a representation of brain regions that exhibit statistically significant changes in neural activity in response to an experimental task or stimuli.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-26T17:30:23Z</dc:date>
<rdfs:label xml:lang="en">activation map</rdfs:label>
<rdfs:label xml:lang="en">brain activation map</rdfs:label>
</owl:Class>


Expand Down Expand Up @@ -5229,23 +5142,18 @@ The values often belong to a group of pixels or voxels that share the same chara
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/MRIO_1000005"/>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000312"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000420"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000044"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000312"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000005"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000044"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000005"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000004"/>
<IAO_0000115>An activation map derived from a blood oxygenation level dependent (BOLD) functional magnetic resonance image data set.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-26T18:16:22Z</dc:date>
Expand All @@ -5261,23 +5169,18 @@ The values often belong to a group of pixels or voxels that share the same chara
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/MRIO_1000006"/>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000312"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000420"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000047"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000312"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000006"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000047"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000006"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000004"/>
<IAO_0000115>An activation map derived from a vascular space occupancy (VASO) functional magnetic resonance image data set.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-26T18:17:27Z</dc:date>
Expand All @@ -5293,23 +5196,18 @@ The values often belong to a group of pixels or voxels that share the same chara
<owl:equivalentClass>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/MRIO_1000007"/>
<owl:Class>
<owl:intersectionOf rdf:parseType="Collection">
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000312"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_0000420"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000041"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000312"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000007"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000041"/>
</owl:Restriction>
</owl:intersectionOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000007"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000004"/>
<IAO_0000115>An activation map derived from an arterial spin labeling (ASL) functional magnetic resonance image data set.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-26T18:17:37Z</dc:date>
Expand All @@ -5319,6 +5217,80 @@ The values often belong to a group of pixels or voxels that share the same chara



<!-- http://purl.obolibrary.org/obo/MRIO_1000024 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000024">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000453"/>
<IAO_0000115>A measure function that models the temporal changes in brain blood flow and oxygenation in response to neural activity.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:26:45Z</dc:date>
<oboInOwl:hasExactSynonym>HRF</oboInOwl:hasExactSynonym>
<rdfs:label xml:lang="en">hemodynamic response function</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000025 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000025">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000024"/>
<IAO_0000115>A standard model of the hemodynamic response function (HRF) that represents the typical temporal changes in brain blood flow and oxygenation in response to neural activity, used as a reference in neuroimaging studies to interpret brain activation patterns.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:27:39Z</dc:date>
<oboInOwl:hasExactSynonym>canonical HRF</oboInOwl:hasExactSynonym>
<rdfs:label xml:lang="en">canonical hemodynamic response function</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000026 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000026">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UO_0000095"/>
<IAO_0000115>A volume unit in a three-dimensional imaging system that represents a discrete cubic or rectangular portion of space.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:38:57Z</dc:date>
<rdfs:label xml:lang="en">voxel</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000027 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000027">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MRIO_1000026"/>
<IAO_0000115>A specific voxel selected as a starting point for examining or analyzing three-dimensional data.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:39:07Z</dc:date>
<rdfs:label xml:lang="en">seed voxel</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000028 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000028">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000028"/>
<IAO_0000115>A three-dimensional spatial region defined by a cluster of contiguous voxels used as the starting point for examining or analyzing three-dimensional data.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T17:41:46Z</dc:date>
<rdfs:label xml:lang="en">seed region</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000029 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000029">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0003327"/>
<IAO_0000115>An image data set in which all images are acquired or aligned within the same plane of reference.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-07-31T18:08:58Z</dc:date>
<rdfs:label xml:lang="en">coplaner image data set</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000030 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000030">
Expand Down Expand Up @@ -5382,17 +5354,6 @@ The values often belong to a group of pixels or voxels that share the same chara



<!-- http://purl.obolibrary.org/obo/MRIO_1000047 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000047">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0003336"/>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-08-09T22:04:39Z</dc:date>
<rdfs:label xml:lang="en">vascular space occupancy functional magnetic resonance image data set</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000044 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000044">
Expand All @@ -5410,11 +5371,25 @@ The values often belong to a group of pixels or voxels that share the same chara
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0003336"/>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-08-09T21:49:33Z</dc:date>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-08-09T22:04:39Z</dc:date>
<rdfs:label xml:lang="en">vascular space occupancy functional magnetic resonance image data set</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_1000050 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_1000050">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO:0008015"/>
<IAO_0000115>Blood circulation that is increased in the brain, in response to neural activity.</IAO_0000115>
<dc:creator rdf:resource="https://orcid.org/0009-0004-2155-902X"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2024-08-05T20:00:54Z</dc:date>
<oboInOwl:hasExactSynonym>HR</oboInOwl:hasExactSynonym>
<rdfs:label xml:lang="en">hemodynamic response</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/MRIO_a535096d_151b_47c9_9be4_83b7799917df -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/MRIO_a535096d_151b_47c9_9be4_83b7799917df">
Expand Down Expand Up @@ -6198,5 +6173,5 @@ The values often belong to a group of pixels or voxels that share the same chara



<!-- Generated by the OWL API (version 4.5.29.2024-05-13T12:11:03Z) https://github.com/owlcs/owlapi -->
<!-- Generated by the OWL API (version 4.5.25.2023-02-15T19:15:49Z) https://github.com/owlcs/owlapi -->

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