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OMICs Bioinformatics Tools

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  1. TCGAbiolinks TCGAbiolinks Public

    TCGAbiolinks

    R 300 113

  2. TCGAWorkflow TCGAWorkflow Public

    TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages

    TeX 42 20

  3. TCGAbiolinksGUI TCGAbiolinksGUI Public

    TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/

    R 35 14

  4. PanCanStem_Web PanCanStem_Web Public

    HTML 30 14

  5. Bioc2017.TCGAbiolinks.ELMER Bioc2017.TCGAbiolinks.ELMER Public

    Integrative analysis workshop with TCGAbiolinks and ELMER

    6

  6. TCGAWorkflowData TCGAWorkflowData Public

    Example data to TCGAWorkflow

    R 4 5

Repositories

Showing 10 of 12 repositories
  • TCGAbiolinks Public

    TCGAbiolinks

    BioinformaticsFMRP/TCGAbiolinks’s past year of commit activity
    R 300 113 254 (16 issues need help) 2 Updated Aug 8, 2024
  • TCGAWorkflow Public

    TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages

    BioinformaticsFMRP/TCGAWorkflow’s past year of commit activity
    TeX 42 20 9 1 Updated Jun 30, 2023
  • TCGAWorkflowData Public

    Example data to TCGAWorkflow

    BioinformaticsFMRP/TCGAWorkflowData’s past year of commit activity
    R 4 5 0 1 Updated Dec 29, 2022
  • TCGAbiolinksGUI.data Public

    Data package for TCGAbiolinksGUI

    BioinformaticsFMRP/TCGAbiolinksGUI.data’s past year of commit activity
    R 1 0 0 0 Updated Mar 31, 2022
  • PanCanStem_Web Public
    BioinformaticsFMRP/PanCanStem_Web’s past year of commit activity
    HTML 30 GPL-3.0 14 5 0 Updated Dec 2, 2021
  • TCGAbiolinksGUI Public

    TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/

    BioinformaticsFMRP/TCGAbiolinksGUI’s past year of commit activity
    R 35 14 33 0 Updated Aug 2, 2021
  • docker Public

    Build docker for TCGAbiolinksGUI, ELMER, TCGAbiolinks

    BioinformaticsFMRP/docker’s past year of commit activity
    Dockerfile 1 0 0 0 Updated Jul 10, 2020
  • GeLB Public

    R script related to the manuscript "A serum-based DNA methylation assay provides accurate tumor detection and monitoring of glioma"

    BioinformaticsFMRP/GeLB’s past year of commit activity
    R 0 0 0 0 Updated Jan 28, 2020
  • Bioc2017.TCGAbiolinks.ELMER Public

    Integrative analysis workshop with TCGAbiolinks and ELMER

    BioinformaticsFMRP/Bioc2017.TCGAbiolinks.ELMER’s past year of commit activity
    6 0 3 0 Updated Aug 2, 2017
  • TCGAbiolinksData Public

    TCGAbiolinks auxiliary data package

    BioinformaticsFMRP/TCGAbiolinksData’s past year of commit activity
    R 1 GPL-3.0 1 0 0 Updated Apr 6, 2017
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