Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Convert IRangesOverview.Rnw to IRangesOverview.Rmd #49

Open
wants to merge 8 commits into
base: devel
Choose a base branch
from
Open

Convert IRangesOverview.Rnw to IRangesOverview.Rmd #49

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
8 commits
Select commit Hold shift + click to select a range
69705d5
Update DESCRIPTION with BiocStyle, knitr, VignetteBuilder
sonali8434 Jun 8, 2023
7986cb8
Convert file to Rmd
sonali8434 Jun 12, 2023
8c1fc13
Remove file.Rnw
sonali8434 Jun 12, 2023
d51fec6
Updated the links, objects and functions
sonali8434 Jun 13, 2023
002eaaf
updated Discription, added sonali as contributor in.Rmd
sonali8434 Jun 13, 2023
22bcb7a
Update DESCRIPTION
sonali8434 Jun 13, 2023
253377d
Update IRangesOverview.Rmd after first review
sonali8434 Jun 16, 2023
45d5f03
Removed `pgap` section.
sonali8434 Jun 28, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
9 changes: 6 additions & 3 deletions DESCRIPTION
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -15,15 +15,17 @@ License: Artistic-2.0
Encoding: UTF-8
Authors@R: c(
person("Hervé", "Pagès", role=c("aut", "cre"),
email="[email protected]"),
email="[email protected]"),
person("Patrick", "Aboyoun", role="aut"),
person("Michael", "Lawrence", role="aut"))
person("Michael", "Lawrence", role="aut"),
person("Sonali", "Kumari", role="ctb",
comment="Converted IrangesOverview vignette from Sweave to RMarkdown / HTML."))
Depends: R (>= 4.0.0), methods, utils, stats,
BiocGenerics (>= 0.39.2), S4Vectors (>= 0.33.3)
Imports: stats4
LinkingTo: S4Vectors
Suggests: XVector, GenomicRanges, Rsamtools, GenomicAlignments, GenomicFeatures,
BSgenome.Celegans.UCSC.ce2, pasillaBamSubset, RUnit, BiocStyle
BSgenome.Celegans.UCSC.ce2, pasillaBamSubset, RUnit, BiocStyle, knitr
Collate: range-squeezers.R
Vector-class-leftovers.R
DataFrameList-class.R
Expand Down Expand Up @@ -79,3 +81,4 @@ Collate: range-squeezers.R
tile-methods.R
extractListFragments.R
zzz.R
VignetteBuilder: knitr
Loading