Fixed RP-SR support problem

vh/vh_setcover.c

@@ -965,12 +965,13 @@ float calWeight( bam_info **in_bams, parameters *params, int clusterId, int *cou
 	{
 		if( read_names[ptrReadMapping->readId].readCovered == 0 && listClusterEl[clusterId].indIdCount[ptrReadMapping->indId] > -1)
 		{
-			supOfIndSeen[ptrReadMapping->indId]++;
 
 			/* Count the number of split reads supporting this cluster */
 			if( strcmp( multiLibs[read_names[ptrReadMapping->readId].libId].libName, "SplitRead") == 0)
 				listClusterEl[clusterId].sr_support[ptrReadMapping->indId]++;
 
+			supOfIndSeen[ptrReadMapping->indId]++;
+
 			//////////////////////////////////////THE HUERISTIC//////////////////////////
 			//Instead of taking the total support as number of reads in each cluster, we use summation of
 			//normalized number of reads. i.e each read contributes as 1/(total number of mappings) it has.