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22 Open 70 Closed
22 Open 70 Closed
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Issues list

Consider adapting long formats for output files
#159 opened Feb 24, 2023 by alexg9010
Step away from modifying column names
#158 opened Feb 24, 2023 by alexg9010
Better deconvolution error reporting type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#157 opened Feb 23, 2023 by jonasfreimuth
No version referenced in the reports prio:Med Issues that needs to be fixed in a month type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#151 opened Oct 25, 2022 by jonasfreimuth
Rule create_overviewQC_table takes needlessly long prio:Med Issues that needs to be fixed in a month type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#134 opened Aug 13, 2022 by jonasfreimuth
include databases in release? prio:Med Issues that needs to be fixed in a month type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#102 opened Mar 4, 2022 by alexg9010
2 tasks
2
ivar_primer_trim rule: calculate 80% of length for trimming prio:High Most urgent issues get this tag type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#99 opened Feb 8, 2022 by rcuadrat
2
Outputs from only *.vcf file type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#95 opened Dec 29, 2021 by sinclairify
@vicfabienne
7
mutation_sheet: Write script to write a mutation sheet automatically from covidCG lists good first issue Good for newcomers prio:Low issues needs to be fixed in long term type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#94 opened Sep 2, 2021 by vicfabienne
2
Adding num of Sars-Cov-2 hits to taxonomy report type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#92 opened Aug 18, 2021 by mirifax
reports: get descriptive parameters from settings-file prio:Low issues needs to be fixed in long term question Further information is requested type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#83 opened Jun 23, 2021 by vicfabienne
2
needed: Stack plot giving overview over all samples despite location prio:Med Issues that needs to be fixed in a month type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#82 opened Jun 22, 2021 by vicfabienne
1
add location labels zu discs on map plot prio:Low issues needs to be fixed in long term type:aesthetics enhance the looks type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#76 opened Jun 9, 2021 by vicfabienne
Ideas for various convenience scripts type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#68 opened Jun 5, 2021 by vicfabienne
1 of 2 tasks
3
Write tests and create more robust and maintainable architecture prio:Med Issues that needs to be fixed in a month
#67 opened Jun 5, 2021 by vicfabienne
2
Misc points about all reports prio:Med Issues that needs to be fixed in a month type:aesthetics enhance the looks
#65 opened Jun 4, 2021 by vicfabienne
3 of 5 tasks
3
remove whitespace type:aesthetics enhance the looks
#64 opened Jun 4, 2021 by vicfabienne
Misc points about the qc reports prio:Med Issues that needs to be fixed in a month question Further information is requested
#63 opened Jun 4, 2021 by vicfabienne
2 of 3 tasks
@vicfabienne
2
Allow optional specification of cut off factor per sample prio:Med Issues that needs to be fixed in a month type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#53 opened Jun 4, 2021 by rekado
Compute read length automatically prio:Med Issues that needs to be fixed in a month type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#52 opened Jun 4, 2021 by rekado
documentation refinement suggestions question Further information is requested type:documentation Improvements or additions to documentation
#51 opened Jun 4, 2021 by vicfabienne
17 of 30 tasks
1
How to improve navigation through the reports brainstorming Issues under discussion and that doesn't have a clear to do prio:Med Issues that needs to be fixed in a month type:enhancement any enhancement that doesn't fit into aesthetics, bug or documentation
#33 opened May 27, 2021 by mirifax
3 tasks
@rekado
8
ProTip! What’s not been updated in a month: updated:<2024-12-28.