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Aske-Rosted · May 28, 2024 · 4514c94 · 4514c94
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Showing 12 changed files with 278 additions and 14 deletions.
diff --git a/_modules/graphnet/models/components/embedding.html b/_modules/graphnet/models/components/embedding.html
@@ -452,6 +452,7 @@ <h1 id="modules-graphnet-models-components-embedding--page-root">Source code for
                 <span class="sa">f</span><span class="s2">"</span><span class="si">{</span><span class="n">n_features</span><span class="si">}</span><span class="s2"> features."</span>
             <span class="p">)</span>
         <span class="k">elif</span> <span class="n">n_features</span> <span class="o">&gt;=</span> <span class="mi">6</span><span class="p">:</span>
+
             <span class="n">hidden_dim</span> <span class="o">=</span> <span class="mi">6</span> <span class="o">*</span> <span class="n">seq_length</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="n">hidden_dim</span> <span class="o">=</span> <span class="nb">int</span><span class="p">((</span><span class="n">n_features</span> <span class="o">+</span> <span class="mf">0.5</span><span class="p">)</span> <span class="o">*</span> <span class="n">seq_length</span><span class="p">)</span>

diff --git a/_modules/graphnet/models/graphs/graph_definition.html b/_modules/graphnet/models/graphs/graph_definition.html
@@ -377,7 +377,7 @@ <h1 id="modules-graphnet-models-graphs-graph-definition--page-root">Source code
     <span class="k">def</span> <span class="fm">__init__</span><span class="p">(</span>
         <span class="bp">self</span><span class="p">,</span>
         <span class="n">detector</span><span class="p">:</span> <span class="n">Detector</span><span class="p">,</span>
-        <span class="n">node_definition</span><span class="p">:</span> <span class="n">NodeDefinition</span> <span class="o">=</span> <span class="n">NodesAsPulses</span><span class="p">(),</span>
+        <span class="n">node_definition</span><span class="p">:</span> <span class="n">NodeDefinition</span> <span class="o">=</span> <span class="kc">None</span><span class="p">,</span>
         <span class="n">edge_definition</span><span class="p">:</span> <span class="n">Optional</span><span class="p">[</span><span class="n">EdgeDefinition</span><span class="p">]</span> <span class="o">=</span> <span class="kc">None</span><span class="p">,</span>
         <span class="n">input_feature_names</span><span class="p">:</span> <span class="n">Optional</span><span class="p">[</span><span class="n">List</span><span class="p">[</span><span class="nb">str</span><span class="p">]]</span> <span class="o">=</span> <span class="kc">None</span><span class="p">,</span>
         <span class="n">dtype</span><span class="p">:</span> <span class="n">Optional</span><span class="p">[</span><span class="n">torch</span><span class="o">.</span><span class="n">dtype</span><span class="p">]</span> <span class="o">=</span> <span class="n">torch</span><span class="o">.</span><span class="n">float</span><span class="p">,</span>
@@ -422,6 +422,9 @@ <h1 id="modules-graphnet-models-graphs-graph-definition--page-root">Source code
         <span class="c1"># Base class constructor</span>
         <span class="nb">super</span><span class="p">()</span><span class="o">.</span><span class="fm">__init__</span><span class="p">(</span><span class="n">name</span><span class="o">=</span><span class="vm">__name__</span><span class="p">,</span> <span class="n">class_name</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="vm">__class__</span><span class="o">.</span><span class="vm">__name__</span><span class="p">)</span>
 
+        <span class="k">if</span> <span class="n">node_definition</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="n">node_definition</span> <span class="o">=</span> <span class="n">NodesAsPulses</span><span class="p">()</span>
+
         <span class="c1"># Member Variables</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">_detector</span> <span class="o">=</span> <span class="n">detector</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">_edge_definition</span> <span class="o">=</span> <span class="n">edge_definition</span>

diff --git a/_modules/graphnet/models/graphs/graphs.html b/_modules/graphnet/models/graphs/graphs.html
@@ -408,6 +408,50 @@ <h1 id="modules-graphnet-models-graphs-graphs--page-root">Source code for graphn
             <span class="n">seed</span><span class="o">=</span><span class="n">seed</span><span class="p">,</span>
         <span class="p">)</span></div>
 
+
+
+<div class="viewcode-block" id="EdgelessGraph">
+<a class="viewcode-back" href="../../../../api/graphnet.models.graphs.graphs.html#graphnet.models.graphs.graphs.EdgelessGraph">[docs]</a>
+<span class="k">class</span> <span class="nc">EdgelessGraph</span><span class="p">(</span><span class="n">GraphDefinition</span><span class="p">):</span>
+<span class="w">    </span><span class="sd">"""A Data representation without edge assignment.</span>
+
+<span class="sd">    I.e the resulting representation is created without an EdgeDefinition.</span>
+<span class="sd">    """</span>
+
+    <span class="k">def</span> <span class="fm">__init__</span><span class="p">(</span>
+        <span class="bp">self</span><span class="p">,</span>
+        <span class="n">detector</span><span class="p">:</span> <span class="n">Detector</span><span class="p">,</span>
+        <span class="n">node_definition</span><span class="p">:</span> <span class="n">NodeDefinition</span> <span class="o">=</span> <span class="kc">None</span><span class="p">,</span>
+        <span class="n">input_feature_names</span><span class="p">:</span> <span class="n">Optional</span><span class="p">[</span><span class="n">List</span><span class="p">[</span><span class="nb">str</span><span class="p">]]</span> <span class="o">=</span> <span class="kc">None</span><span class="p">,</span>
+        <span class="n">dtype</span><span class="p">:</span> <span class="n">Optional</span><span class="p">[</span><span class="n">torch</span><span class="o">.</span><span class="n">dtype</span><span class="p">]</span> <span class="o">=</span> <span class="n">torch</span><span class="o">.</span><span class="n">float</span><span class="p">,</span>
+        <span class="n">perturbation_dict</span><span class="p">:</span> <span class="n">Optional</span><span class="p">[</span><span class="n">Dict</span><span class="p">[</span><span class="nb">str</span><span class="p">,</span> <span class="nb">float</span><span class="p">]]</span> <span class="o">=</span> <span class="kc">None</span><span class="p">,</span>
+        <span class="n">seed</span><span class="p">:</span> <span class="n">Optional</span><span class="p">[</span><span class="n">Union</span><span class="p">[</span><span class="nb">int</span><span class="p">,</span> <span class="n">Generator</span><span class="p">]]</span> <span class="o">=</span> <span class="kc">None</span><span class="p">,</span>
+    <span class="p">)</span> <span class="o">-&gt;</span> <span class="kc">None</span><span class="p">:</span>
+<span class="w">        </span><span class="sd">"""Construct isolated nodes graph representation.</span>
+
+<span class="sd">        Args:</span>
+<span class="sd">            detector: Detector that represents your data.</span>
+<span class="sd">            node_definition: Definition of nodes in the graph.</span>
+<span class="sd">            input_feature_names: Name of input feature columns.</span>
+<span class="sd">            dtype: data type for node features.</span>
+<span class="sd">            perturbation_dict: Dictionary mapping a feature name to a standard</span>
+<span class="sd">                               deviation according to which the values for this</span>
+<span class="sd">                               feature should be randomly perturbed. Defaults</span>
+<span class="sd">                               to None.</span>
+<span class="sd">            seed: seed or Generator used to randomly sample perturbations.</span>
+<span class="sd">                  Defaults to None.</span>
+<span class="sd">        """</span>
+        <span class="c1"># Base class constructor</span>
+        <span class="nb">super</span><span class="p">()</span><span class="o">.</span><span class="fm">__init__</span><span class="p">(</span>
+            <span class="n">detector</span><span class="o">=</span><span class="n">detector</span><span class="p">,</span>
+            <span class="n">node_definition</span><span class="o">=</span><span class="n">node_definition</span> <span class="ow">or</span> <span class="n">NodesAsPulses</span><span class="p">(),</span>
+            <span class="n">edge_definition</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
+            <span class="n">dtype</span><span class="o">=</span><span class="n">dtype</span><span class="p">,</span>
+            <span class="n">input_feature_names</span><span class="o">=</span><span class="n">input_feature_names</span><span class="p">,</span>
+            <span class="n">perturbation_dict</span><span class="o">=</span><span class="n">perturbation_dict</span><span class="p">,</span>
+            <span class="n">seed</span><span class="o">=</span><span class="n">seed</span><span class="p">,</span>
+        <span class="p">)</span></div>
+
 </pre></div>
 
           </article>