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Fetch EcephysSession from SLIMS #38

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merged 17 commits into from
Oct 4, 2024
Merged

Fetch EcephysSession from SLIMS #38

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8f24fd3
Dome Module ephys logging
mekhlakapoor Sep 24, 2024
00b8841
ExperimentRunStep and ExperimentRunStepContnet
mekhlakapoor Sep 25, 2024
4bb11cb
methods to combine session-related data
mekhlakapoor Sep 26, 2024
0281022
adds Rdrc models to fetch method
mekhlakapoor Sep 27, 2024
524b564
fixes models, SlimsEcephysSession
mekhlakapoor Sep 28, 2024
90f03ab
linters
mekhlakapoor Sep 30, 2024
0b59884
fix conflicts
mekhlakapoor Sep 30, 2024
3992994
Merge branch 'main' into feat-32-ecephys-rdrc
mekhlakapoor Sep 30, 2024
dd1f13d
post filter fix
mekhlakapoor Oct 1, 2024
1e6b1e0
syncing remote and local
mekhlakapoor Oct 1, 2024
56aa6f2
testing (wip)
mekhlakapoor Oct 2, 2024
dbb3354
unit tests
mekhlakapoor Oct 2, 2024
2893927
simplifies experimentrunstep models
mekhlakapoor Oct 2, 2024
1c505c2
adds example usage
mekhlakapoor Oct 2, 2024
d70b98b
linter
mekhlakapoor Oct 2, 2024
4b7f5b2
requested changes
mekhlakapoor Oct 3, 2024
2a59ada
updates docstrings
mekhlakapoor Oct 4, 2024
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5 changes: 3 additions & 2 deletions src/aind_slims_api/core.py
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Original file line number Diff line number Diff line change
Expand Up @@ -143,6 +143,7 @@ def fetch_models(
"""
resolved_kwargs = deepcopy(model._base_fetch_filters)
logger.debug("Resolved kwargs: %s", resolved_kwargs)

if isinstance(sort, str):
sort = [sort]

Expand All @@ -160,7 +161,7 @@ def fetch_models(
sort=resolved_sort,
start=start,
end=end,
**resolved_kwargs
**resolved_kwargs,
)
return self._validate_models(model, response)

Expand Down Expand Up @@ -189,7 +190,7 @@ def fetch_model(
if len(records) > 0:
logger.debug(f"Found {len(records)} records for {model}.")
if len(records) < 1:
raise SlimsRecordNotFound("No record found.")
raise SlimsRecordNotFound(f"No record found for {model} with {args}.")
return records[0]

@staticmethod
Expand Down
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