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Suppose you have multiple modalities and you want to segment based on their joint structure.
aa<-antsImageRead(modality1) bb<-antsImageRead(modality2) mm<-getMask( aa ) cl <- kmeans( cbind( aa[mm==1], bb[mm==1] ) , 3 ) km<-makeImage( mm, cl$cluster )
Compute the k probabilities:
# not done