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Asan build

Asan build #2

Workflow file for this run

name: Address sanitizer build
on:
push:
branches:
- main
- dev
- alpha-dev
pull_request:
branches:
- main
- dev
- alpha-dev
workflow_dispatch:
jobs:
address-sanitizer:
name: Address Sanitizer
runs-on: ubuntu-latest
env:
ASAN_OPTIONS: "alloc_dealloc_mismatch=0:detect_stack_use_after_return=1:check_initialization_order=1:strict_init_order=1"
defaults:
run:
# Conda requires a login shell in order to work properly
shell: bash -l {0}
steps:
- uses: actions/checkout@v4
- name: Create Helios dev environment
uses: conda-incubator/setup-miniconda@v2
with:
auto-update-conda: true
auto-activate-base: false
activate-environment: helios-dev
environment-file: environment-dev.yml
python-version: "3.12"
- name: Install conda-based gcc
run: |
conda install -c conda-forge gcc gxx
- name: Install Helios
run: |
python -m pip install \
--no-build-isolation \
--config-settings=build-dir="build" \
--config-settings=cmake.build-type="Debug" \
--config-settings=cmake.define.CMAKE_CXX_FLAGS="--fsanitize=address -fsanitize-address-use-after-scope -fno-omit-frame-pointer" \
--verbose \
--editable \
.
- name: run python tests
# for LD_PRELOAD see https://github.com/google/sanitizers/issues/934#issuecomment-649516500
run: |
echo "leak:/usr/bin/bash" > supp.txt
# hack to prevent external libs from dlclosing libraries,
# which otherwise results in <module not found> LSAN leaks that cannot be suppressed
# https://github.com/google/sanitizers/issues/89#issuecomment-406316683
echo "#include <stdio.h>" > dlclose.c
echo "int dlclose(void *handle) { return 0; }" >> dlclose.c
clang -shared dlclose.c -o libdlclose.so
LSAN_OPTIONS=suppressions="$(pwd)/supp.txt" LD_PRELOAD="$(gcc -print-file-name=libasan.so) $(gcc -print-file-name=libstdc++.so) $(pwd)/libdlclose.so" PYTHONMALLOC=malloc helios --test
LSAN_OPTIONS=suppressions="$(pwd)/supp.txt" LD_PRELOAD="$(gcc -print-file-name=libasan.so) $(gcc -print-file-name=libstdc++.so) $(pwd)/libdlclose.so" PYTHONMALLOC=malloc python -m pytest -s