You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
When running the workflow via Conda, this message appears:
Environment for /home/XXXX/mirflowz/workflow/envs/python.yaml created (location: .snakemake/conda/acfa1a6f2c679a65546a19fba8898208_)
Creating conda environment /home/XXXX/mirflowz/workflow/envs/r.yaml...
Downloading and installing remote packages.
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working...
To install TinyTeX with `tinytex::install_tinytex()` the system must have a functional Perl
installation with a `File::Find` module. Most end-user systems will already satisfy this
requirement; however, some minimal contexts (e.g., containers) may not. Perl is available
via Conda Forge as the package `perl`. See https://github.com/rstudio/tinytex/issues/419
done
TinyTex is -in principle- not used in the workflow therefore this warning is related to some dependencies within r.yaml that might - or might not - affect the end result and the workflow behavior.
Check the dependencies and requirements for the sub-environment r.yaml and its relation to the R scripts to fix this.
The text was updated successfully, but these errors were encountered:
When running the workflow via Conda, this message appears:
TinyTex
is -in principle- not used in the workflow therefore this warning is related to some dependencies withinr.yaml
that might - or might not - affect the end result and the workflow behavior.Check the dependencies and requirements for the sub-environment
r.yaml
and its relation to theR
scripts to fix this.The text was updated successfully, but these errors were encountered: