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  1. waveAnalysis waveAnalysis Public

    Python tools for batch analysis of oscillatory dynamics

    Python 2 1

  2. volume-distribution volume-distribution Public

    A semi-automated pipeline for filtering 3D segmentations, and measuring the relative orientation of cells and spindles in 3D space.

    Jupyter Notebook

  3. opticalFlow opticalFlow Public

    Scripts for interactively visualizing and batch quantifying the optical flow of image sequences

    Python 2 1

  4. temporal-derivative-plots temporal-derivative-plots Public

    Interactive Matplotlib interface to visualize the relative contributions of spatially separated signal loss and signal gain to the overall signal in the field of view

    Python