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[pre-commit.ci] pre-commit autoupdate #35

[pre-commit.ci] pre-commit autoupdate

[pre-commit.ci] pre-commit autoupdate #35

# Test if example can run on multiplatform and both in serial (gcc) and parallel (openmpi)
name: Example Test Run
on:
push:
branches: [ main ]
paths-ignore:
- 'doc/**'
- '**.md'
pull_request:
branches: [ main ]
paths-ignore:
- 'doc/**'
- '**.md'
workflow_dispatch:
jobs:
example-test-run:
runs-on: ${{ matrix.platform.os }}
strategy:
fail-fast: false
matrix:
platform:
- os: ubuntu-latest
mpi: 'openmpi'
- os: macos-12
mpi: 'mpich'
python-version: ['3.7', '3.8', '3.9', '3.10', '3.11', '3.12']
steps:
- name: Checkout libyt repo
uses: actions/checkout@v4
- name: CMake Version
run: cmake --version
- name: Setup Python ${{ matrix.python-version }} environment
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
architecture: 'x64'
cache: 'pip'
- run: |
python -m pip install --upgrade pip
pip install -r ${{ github.workspace }}/.github/tools/requirements.txt
- name: Setup MPI environment
uses: mpi4py/setup-mpi@v1
with:
mpi: ${{ matrix.platform.mpi }}
- name: Install yt, mpi4py, and yt_libyt
run: |
pip install mpi4py yt yt_libyt
- name: Update GitHub Environment Variables
run: |
echo "LIBYT_PARALLEL_INSTALL_PATH=${{ github.workspace }}/libyt_parallel" >> $GITHUB_ENV
echo "LIBYT_SERIAL_INSTALL_PATH=${{ github.workspace }}/libyt_serial" >> $GITHUB_ENV
- name: Build libyt -- Parallel (MPI)
run: |
cd ${{ github.workspace }}
rm -rf build
cmake -B build -S . -DINTERACTIVE_MODE=ON -DJUPYTER_KERNEL=ON
cmake --build build
cmake --install build --prefix "${{ env.LIBYT_PARALLEL_INSTALL_PATH }}"
- name: Build libyt -- Serial (GCC)
run: |
cd ${{ github.workspace }}
rm -rf build-serial
cmake -B build-serial -S . -DSERIAL_MODE=ON -DINTERACTIVE_MODE=ON -DJUPYTER_KERNEL=ON
cmake --build build-serial
cmake --install build-serial --prefix "${{ env.LIBYT_SERIAL_INSTALL_PATH }}"
- name: Prepare Test
run: |
cd ${{ github.workspace }}/example/amr-example
cp ${{ github.workspace }}/.github/tests/test-DataIO/DataIOTest.py .
- name: Generate Density Data for Testing
run: |
cd ${{ github.workspace }}/example/amr-example
cp ${{ github.workspace }}/.github/tools/generate_density_data.cpp .
g++ -o generate_density_data generate_density_data.cpp
./generate_density_data
- name: Test Run and DataIO Test - example - Serial
run: |
cd ${{ github.workspace }}/example/amr-example
make clean
make OPTIONS=-DSERIAL_MODE LIBYT_PATH="${{ env.LIBYT_SERIAL_INSTALL_PATH }}"
./example DataIOTest.py
- name: Test Run and DataIO Test - example - Parallel (MPI Size 3)
run: |
cd ${{ github.workspace }}/example/amr-example
make clean
make LIBYT_PATH="${{ env.LIBYT_PARALLEL_INSTALL_PATH }}"
OMPI_MCA_osc=sm,pt2pt mpirun -np 3 ./example DataIOTest.py