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xiyupeng · Dec 19, 2023 · 0788c99 · 0788c99
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -25,7 +25,7 @@ LinkingTo: Rcpp,
 Suggests: 
     knitr,
     rmarkdown,
-    SeuratObject (>=4.9.9.9086),
+    SeuratObject (>= 4.9.9.9086),
     doParallel (>= 1.0),
 VignetteBuilder: knitr
 RoxygenNote: 7.2.3

diff --git a/NEWS.md b/NEWS.md
@@ -1,5 +1,7 @@
 # SpaTopic 1.0
 
+* Initial submission to CRAN
+
 # SpaTopic 0.99
 
 * The Version under development
diff --git a/R/image_data.R b/R/image_data.R
@@ -5,10 +5,10 @@
 #' @format ## `lung5`
 #' A data frame with 100149 rows and 4 columns: 
 #' \describe{ 
-#'   \item{image} Image ID
-#'   \item{X} X coordinate of the cell
-#'   \item{Y} Y coordinate of the cell
-#'   \item{type} cell type
+#'   \item{image}{Image ID}
+#'   \item{X}{X coordinate of the cell}
+#'   \item{Y}{Y coordinate of the cell}
+#'   \item{type}{cell type}
 #' } 
 #' @source <https://nanostring.com/products/cosmx-spatial-molecular-imager/ffpe-dataset/nsclc-ffpe-dataset/>
 #' @seealso \code{\link{SpaTopic_inference}},\code{\link{Seurat5obj_to_SpaTopic}}

diff --git a/docs/404.html b/docs/404.html
diff --git a/docs/LICENSE.html b/docs/LICENSE.html
diff --git a/docs/articles/Intro_SpaTopic.html b/docs/articles/Intro_SpaTopic.html
diff --git a/docs/articles/Model_Selection.html b/docs/articles/Model_Selection.html
diff --git a/docs/articles/SpaTopic.html b/docs/articles/SpaTopic.html
diff --git a/docs/articles/index.html b/docs/articles/index.html
diff --git a/docs/authors.html b/docs/authors.html
diff --git a/docs/index.html b/docs/index.html