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Dear Victor,
I ran EPIC methylation array and trying to examine probes that associate with promoter regions. I notice that the latest b4 annotation contains information (promoter associated, gene associated, etc.) for only less than 30% of 865k probes. Thus, I am interested in your proposed method.
Do you have a script to intersect probe coordinates and UCSC annotations for cpg islands?
Thank you in advance!
Hai
The text was updated successfully, but these errors were encountered:
Dear Victor,
I ran EPIC methylation array and trying to examine probes that associate with promoter regions. I notice that the latest b4 annotation contains information (promoter associated, gene associated, etc.) for only less than 30% of 865k probes. Thus, I am interested in your proposed method.
Do you have a script to intersect probe coordinates and UCSC annotations for cpg islands?
Thank you in advance!
Hai
The text was updated successfully, but these errors were encountered: