Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

EPIC annotation #1

Open
trandoanduyhai opened this issue Mar 2, 2022 · 0 comments
Open

EPIC annotation #1

trandoanduyhai opened this issue Mar 2, 2022 · 0 comments

Comments

@trandoanduyhai
Copy link

Dear Victor,
I ran EPIC methylation array and trying to examine probes that associate with promoter regions. I notice that the latest b4 annotation contains information (promoter associated, gene associated, etc.) for only less than 30% of 865k probes. Thus, I am interested in your proposed method.
Do you have a script to intersect probe coordinates and UCSC annotations for cpg islands?
Thank you in advance!

Hai

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant