diff --git a/.codecov.yml b/.codecov.yml index c2ecdeae..419985e6 100644 --- a/.codecov.yml +++ b/.codecov.yml @@ -6,4 +6,3 @@ ignore: - tests/* - setup.py - vip_hci/vip_ds9.py - - */__init__.py diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 46607372..e02f0b37 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -33,6 +33,6 @@ jobs: flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics - name: Test with pytest run: | - pytest + make test - name: Upload coverage to Codecov uses: codecov/codecov-action@v2 diff --git a/README.rst b/README.rst index 1743cc0f..5e9fb651 100644 --- a/README.rst +++ b/README.rst @@ -20,8 +20,9 @@ VIP - Vortex Image Processing package .. image:: https://readthedocs.org/projects/vip/badge/?version=latest :target: http://vip.readthedocs.io/en/latest/?badge=latest -.. image:: https://codecov.io/gh/vortex-exoplanet/VIP/branch/master/graph/badge.svg - :target: https://codecov.io/gh/vortex-exoplanet/VIP +.. image:: https://codecov.io/gh/vortex-exoplanet/VIP/branch/master/graph/badge.svg?token=HydCFQqLRf + :target: https://codecov.io/gh/vortex-exoplanet/VIP + :: diff --git a/docs/source/tutorials/02_preproc.ipynb b/docs/source/tutorials/02_preproc.ipynb index 9da40491..f6dd5634 100644 --- a/docs/source/tutorials/02_preproc.ipynb +++ b/docs/source/tutorials/02_preproc.ipynb @@ -29,7 +29,7 @@ " - [2.1.4. Recentering with iterative speckle cross-correlation + 2D negGaussian](#2.1.4.-Recentering-with-iterative-speckle-cross-correlation-+-2D-negGaussian)\n", " - [2.1.5. Validation of the best recentering method](#2.1.5.-Validation-of-the-best-recentering-method) \n", " - [2.1.6. Bad frame trimming](#2.1.6.-Bad-frame-trimming) \n", - " \n", + " \n", "* [2.2. Recentering coronagraphic SPHERE/IFS data](#2.2.-Recentering-coronagraphic-SPHERE/IFS-data)\n", " - [2.2.1. Loading the data](#2.2.1.-Loading-the-data)\n", " - [2.2.2. Bad pixel correction](#2.2.2.-Bad-pixel-correction)\n", @@ -37,6 +37,7 @@ " - [2.2.4. Background-star removal](#2.2.4.-Background-star-removal)\n", " - [2.2.5. Satellite-spot based recentering](#2.2.5.-Satellite-spot-based-recentering)\n", " - [2.2.6. Radon-transform based recentering](#2.2.6.-Radon-transform-based-recentering)\n", + " \n", "* [2.3. Pre-processing a SINFONI datacube](#2.3.-Pre-processing-a-SINFONI-datacube)\n", " - [2.3.1. Loading the data](#2.3.1.-Loading-the-data)\n", " - [2.3.2. Measuring the FWHM](#2.3.2.-Measuring-the-FWHM)\n",