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Final mile #45

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merged 18 commits into from
Aug 16, 2024
Merged

Final mile #45

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e511f5c
Remove Ricky's Code
AvocadoMoon Jul 15, 2024
fb908d5
Context Aware GUI
AvocadoMoon Jul 16, 2024
c81fc7d
Context Dependent GUI
AvocadoMoon Jul 17, 2024
854ef85
Include Help
AvocadoMoon Jul 17, 2024
e5e32a9
Fixed Null Examples
AvocadoMoon Jul 19, 2024
475d143
Allow Self Signed Certs
AvocadoMoon Jul 19, 2024
ae88d4d
Fix examples URL and Deletion Bug
AvocadoMoon Jul 19, 2024
6cd4bc5
New Export Tested and Updated Mask Function
AvocadoMoon Jul 22, 2024
0618eb6
Test The Units/Pixel
AvocadoMoon Jul 22, 2024
2a67de5
Set Metadata for Images in their Properties
AvocadoMoon Jul 26, 2024
eebfd14
Remove Old Test
AvocadoMoon Jul 26, 2024
6a0cf5f
Mask Setting for Tests
AvocadoMoon Jul 26, 2024
b20a80e
Calculate Mean, Min and Max for 5D Images
AvocadoMoon Jul 26, 2024
012de0e
Full Test Coverage
AvocadoMoon Aug 7, 2024
fbcf680
Update Table More Quickly
AvocadoMoon Aug 9, 2024
4dbcd33
ReadME
AvocadoMoon Aug 9, 2024
9a9e890
Custom Cache Loader
AvocadoMoon Aug 15, 2024
c07547a
Final Touches
AvocadoMoon Aug 16, 2024
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14 changes: 13 additions & 1 deletion README.md
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# vcell-fiji
## VCell's Introduction to Analysing Simulation Results in Fiji

---

[Virtual Cell](https://vcell.org/) is a
comprehensive platform for modeling cell biological
systems, and produces simulation results for these systems.

As another analysis avenue we have added the new N5
export file which takes spatial simulation results, and
allow it to be accessed remotely. This plugin can then
read these simulation results stored on our servers in
the N5 format, and open them within Fiji.
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