Utilities for building standardized command-line interfaces for biosimulation tools that support the Simulation Experiment Description Markup Language (SED-ML) and the COMBINE/OMEX format.
- Installation
- API documentation
- License
- Development team
- Contributing to BioSimulators utils
- Acknowledgements
- Questions and comments
Requirements
- Python >= 3.7
- pip
pip install biosimulators-utils
pip install git+https://github.com/biosimulators/Biosimulators_utils.git#biosimulators_utils
API documentation is available here.
This package is released under the MIT license.
This package was developed by the Karr Lab at the Icahn School of Medicine at Mount Sinai in New York and the Center for Reproducible Biomedical Modeling.
We enthusiastically welcome contributions to BioSimulators utils! Please see the guide to contributing and the developer's code of conduct.
This work was supported by National Institutes of Health award P41EB023912.
Please contact the BioSimulators Team with any questions or comments.