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vehicle_drug_feature_counts.txt
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vehicle_drug_feature_counts.txt
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# Program:featureCounts v1.6.0; Command:"featureCounts" "-T" "3" "-t" "gene" "-g" "ID" "-a" "../Reference_Data/PlasmoDB-41_Pfalciparum3D7.gff" "-o" "vehicle_drug_feature_counts.txt" "-p" "vehicle_rep1.bam" "vehicle_rep2.bam" "drug_rep1.bam" "drug_rep2.bam"
Geneid Chr Start End Strand Length vehicle_rep1.bam vehicle_rep2.bam drug_rep1.bam drug_rep2.bam
PF3D7_0621350 Pf3D7_06_v3 876679 877298 - 620 0 7 3 4
PF3D7_1314600 Pf3D7_13_v3 624785 626011 + 1227 68 54 13 25
PF3D7_0209400 Pf3D7_02_v3 388424 390611 - 2188 305 286 208 207
PF3D7_1142200 Pf3D7_11_v3 1692897 1694137 - 1241 8 20 11 3
PF3D7_0507200 Pf3D7_05_v3 298427 300736 - 2310 43 45 51 43
PF3D7_0806000 Pf3D7_08_v3 326215 330004 - 3790 81 62 57 66
PF3D7_1006800 Pf3D7_10_v3 277621 279168 + 1548 1199 924 1028 1184
PF3D7_0412000 Pf3D7_04_v3 536774 539110 + 2337 291 259 392 581
PF3D7_0732200 Pf3D7_07_v3 1390711 1392043 + 1333 3 0 39 68
PF3D7_0324800 Pf3D7_03_v3 1027571 1028929 + 1359 1 0 1 0
PF3D7_1227500 Pf3D7_12_v3 1114025 1121093 - 7069 419 369 331 435
PF3D7_0301800 Pf3D7_03_v3 104325 105281 + 957 10 10 147 163
PF3D7_0920900 Pf3D7_09_v3 855516 857286 + 1771 229 164 128 188
PF3D7_1443600 Pf3D7_14_v3 1784933 1790629 - 5697 28 34 20 32
PF3D7_0415900 Pf3D7_04_v3 697918 698768 - 851 3133 3383 2431 2360
PF3D7_0214100 Pf3D7_02_v3 568529 573315 - 4787 1632 1439 807 1281
PF3D7_0726100 Pf3D7_07_v3 1093566 1096122 - 2557 10 6 24 35
PF3D7_0717700 Pf3D7_07_v3 764794 766413 - 1620 1335 1484 1112 1270
PF3D7_1342200 Pf3D7_13_v3 1660812 1663730 - 2919 14 18 8 8
PF3D7_1400700 Pf3D7_14_v3 24337 25320 - 984 0 0 0 0
PF3D7_1322800 Pf3D7_13_v3 960166 960646 + 481 49 66 27 20
PF3D7_1477400 Pf3D7_14_v3 3183248 3184352 + 1105 1 0 0 0
PF3D7_1106700 Pf3D7_11_v3 279920 282994 - 3075 111 93 79 100
PF3D7_0621100 Pf3D7_06_v3 865845 869909 - 4065 136 191 134 127
PF3D7_1040800 Pf3D7_10_v3 1625772 1626824 + 1053 0 0 0 0
PF3D7_0909100 Pf3D7_09_v3 415205 417433 + 2229 22 10 13 11
PF3D7_1028500 Pf3D7_10_v3 1172129 1174997 - 2869 111 124 147 169
PF3D7_1342400 Pf3D7_13_v3 1666832 1668153 - 1322 843 1148 653 701
PF3D7_1419100 Pf3D7_14_v3 793752 796877 + 3126 64 65 100 121
PF3D7_1448500 Pf3D7_14_v3 1984189 1995574 - 11386 390 328 445 530
PF3D7_1125000 Pf3D7_11_v3 983951 985619 - 1669 272 410 463 521
PF3D7_1468000 Pf3D7_14_v3 2777632 2785114 + 7483 10 9 14 22
PF3D7_0500900 Pf3D7_05_v3 50422 52510 - 2089 63 74 63 67
PF3D7_1207600 Pf3D7_12_v3 349479 351284 - 1806 66 45 77 80
PF3D7_0311400 Pf3D7_03_v3 488804 496510 + 7707 4 1 9 10
PF3D7_0722200 Pf3D7_07_v3 946363 948612 + 2250 146 184 133 111
PF3D7_0515900 Pf3D7_05_v3 660150 661136 - 987 73 124 85 89
PF3D7_0319500 Pf3D7_03_v3 815569 816855 + 1287 227 178 287 331
PF3D7_API02500 Pf3D7_API_v3 7040 7150 + 111 0 0 0 0
PF3D7_1450000 Pf3D7_14_v3 2047793 2050083 + 2291 50 75 139 146
PF3D7_0300600 Pf3D7_03_v3 58307 58519 - 213 0 0 0 0
PF3D7_1222800 Pf3D7_12_v3 920790 922416 - 1627 9 5 6 20
PF3D7_1443900 Pf3D7_14_v3 1797288 1800071 + 2784 242 272 390 418
PF3D7_1470100 Pf3D7_14_v3 2870069 2877589 + 7521 104 78 41 65
PF3D7_0519700 Pf3D7_05_v3 817066 819139 + 2074 401 393 323 444
PF3D7_1469700 Pf3D7_14_v3 2863914 2864531 + 618 95 77 84 117
PF3D7_1455700 Pf3D7_14_v3 2278701 2282162 - 3462 135 108 209 250
PF3D7_1132100 Pf3D7_11_v3 1243226 1246618 - 3393 2 4 5 6
PF3D7_0532200 Pf3D7_05_v3 1303662 1304526 - 865 35 43 73 111
PF3D7_0508700 Pf3D7_05_v3 358261 362733 + 4473 155 137 325 406
PF3D7_1227400 Pf3D7_12_v3 1109151 1112669 - 3519 76 87 107 106
PF3D7_1126200 Pf3D7_11_v3 1023790 1024496 - 707 2295 2635 1542 1554
PF3D7_1242500 Pf3D7_12_v3 1798643 1799788 + 1146 121 47 50 67
PF3D7_0806700 Pf3D7_08_v3 354472 362396 + 7925 161 133 167 220
PF3D7_0303500 Pf3D7_03_v3 182731 189411 + 6681 75 51 90 97
PF3D7_0911100 Pf3D7_09_v3 504412 508130 + 3719 25 29 139 179
PF3D7_0422800 Pf3D7_04_v3 1042564 1044896 + 2333 69 102 46 49
PF3D7_0926300 Pf3D7_09_v3 1064752 1070317 + 5566 84 103 77 121
PF3D7_1215600 Pf3D7_12_v3 635035 635457 + 423 53 74 13 19
PF3D7_1436400 Pf3D7_14_v3 1484166 1488129 + 3964 11 9 2 4
PF3D7_0808700 Pf3D7_08_v3 440408 448062 + 7655 3 1 3 4
PF3D7_1444700 Pf3D7_14_v3 1841960 1842906 + 947 164 212 178 145
PF3D7_1209600 Pf3D7_12_v3 443680 444987 + 1308 9 14 9 13
PF3D7_0523800 Pf3D7_05_v3 990005 992059 + 2055 129 189 334 358
PF3D7_1459700 Pf3D7_14_v3 2444473 2446179 - 1707 197 222 173 210
PF3D7_1409000 Pf3D7_14_v3 353263 355141 - 1879 143 106 144 200
PF3D7_1028900 Pf3D7_10_v3 1184728 1185946 - 1219 11 15 14 13
PF3D7_1447100 Pf3D7_14_v3 1932421 1933200 - 780 163 227 294 317
PF3D7_1026000 Pf3D7_10_v3 1098455 1099882 - 1428 262 287 720 911
PF3D7_1366000 Pf3D7_13_v3 2635213 2635488 + 276 12 40 6 11
malmito_rna_RNA14 Pf_M76611 5508 5546 - 39 1 0 0 0
PF3D7_0919800 Pf3D7_09_v3 804417 807920 - 3504 174 188 257 280
PF3D7_0205000 Pf3D7_02_v3 212982 214508 - 1527 22 25 23 22
PF3D7_1354200 Pf3D7_13_v3 2160318 2162729 - 2412 109 83 66 63
PF3D7_0610800 Pf3D7_06_v3 453671 455689 + 2019 1520 1488 1129 1189
PF3D7_1353200 Pf3D7_13_v3 2130531 2131065 + 535 38 23 192 211
PF3D7_0700300 Pf3D7_07_v3 33585 34804 - 1220 3 0 2 1
PF3D7_0914300 Pf3D7_09_v3 612976 615492 - 2517 83 81 60 96
PF3D7_1005200 Pf3D7_10_v3 232422 232818 - 397 1 1 0 1
PF3D7_0605000 Pf3D7_06_v3 213558 214142 + 585 108 121 150 189
PF3D7_0410900 Pf3D7_04_v3 490442 493375 - 2934 48 49 70 78
PF3D7_1113700 Pf3D7_11_v3 529493 530563 + 1071 218 125 93 118
PF3D7_1108800 Pf3D7_11_v3 377740 378396 + 657 1 0 0 0
PF3D7_1129400 Pf3D7_11_v3 1138075 1139979 - 1905 282 257 373 458
PF3D7_1215000 Pf3D7_12_v3 621125 621775 + 651 96 98 86 97
PF3D7_0607000 Pf3D7_06_v3 293864 296797 + 2934 1513 1256 2142 2835
PF3D7_0519600 Pf3D7_05_v3 812648 814915 + 2268 219 194 197 223
PF3D7_1460600 Pf3D7_14_v3 2473758 2474204 + 447 16 16 30 20
PF3D7_1321700 Pf3D7_13_v3 902383 905166 + 2784 425 498 486 522
PF3D7_0820000 Pf3D7_08_v3 900742 907714 - 6973 307 162 430 547
PF3D7_0623900 Pf3D7_06_v3 977183 978049 + 867 139 204 192 167
PF3D7_0311900 Pf3D7_03_v3 509291 511597 - 2307 78 98 61 86
PF3D7_1372900 Pf3D7_13_v3 2865893 2867226 + 1334 0 0 0 0
PF3D7_0905600 Pf3D7_09_v3 280207 284102 + 3896 2 2 0 1
PF3D7_1437700 Pf3D7_14_v3 1525564 1528485 - 2922 173 113 119 148
PF3D7_1307100 Pf3D7_13_v3 327893 330928 + 3036 97 50 146 198
PF3D7_0532400 Pf3D7_05_v3 1312471 1314154 + 1684 234 86 290 374
PF3D7_0527500 Pf3D7_05_v3 1143618 1145359 + 1742 2166 2024 1351 1468
PF3D7_1110300 Pf3D7_11_v3 410202 411355 - 1154 221 205 201 208
PF3D7_0620600 Pf3D7_06_v3 857726 858610 + 885 3 5 5 6
PF3D7_1214700 Pf3D7_12_v3 615636 616100 + 465 60 65 42 58
PF3D7_1413400 Pf3D7_14_v3 534057 535988 - 1932 93 173 156 153
PF3D7_1327000 Pf3D7_13_v3 1134070 1138040 - 3971 61 36 29 38
PF3D7_0716300 Pf3D7_07_v3 717281 718968 + 1688 1906 2089 1068 1246
PF3D7_1426600 Pf3D7_14_v3 1031065 1035360 - 4296 84 65 29 43
PF3D7_0210400 Pf3D7_02_v3 425689 426497 + 809 191 173 116 152
PF3D7_0920800 Pf3D7_09_v3 852525 854057 - 1533 396 276 476 502
PF3D7_1250000 Pf3D7_12_v3 2044120 2044626 + 507 204 279 276 303
PF3D7_1009200 Pf3D7_10_v3 374864 377611 + 2748 44 31 42 30
PF3D7_1418500 Pf3D7_14_v3 779377 779495 + 119 0 0 0 0
PF3D7_0921900 Pf3D7_09_v3 888559 889305 + 747 476 689 764 702
PF3D7_1463300 Pf3D7_14_v3 2572988 2574607 + 1620 103 99 51 47
PF3D7_0318400 Pf3D7_03_v3 761693 765439 - 3747 1 4 0 2
PF3D7_1321100 Pf3D7_13_v3 861442 872332 - 10891 75 37 46 44
PF3D7_1252900 Pf3D7_12_v3 2162707 2163145 - 439 4 3 8 13
PF3D7_1361300 Pf3D7_13_v3 2462069 2463784 + 1716 1 4 0 2
PF3D7_1244800 Pf3D7_12_v3 1873194 1875287 - 2094 614 691 847 925
PF3D7_1020100 Pf3D7_10_v3 814352 814957 - 606 0 1 0 0
PF3D7_0525000 Pf3D7_05_v3 1036229 1038343 + 2115 173 154 1078 1270
PF3D7_0622600 Pf3D7_06_v3 914743 915429 + 687 165 255 135 138
PF3D7_0732500 Pf3D7_07_v3 1402623 1403978 - 1356 0 0 1 0
PF3D7_0207000 Pf3D7_02_v3 277494 278456 - 963 1101 1110 920 996
PF3D7_1335300 Pf3D7_13_v3 1428874 1438852 - 9979 13 9 36 34
PF3D7_0412300 Pf3D7_04_v3 543625 545247 + 1623 42 33 16 26
PF3D7_1433400 Pf3D7_14_v3 1312304 1329577 - 17274 772 557 458 531
PF3D7_1006900 Pf3D7_10_v3 281459 283104 + 1646 218 366 406 414
PF3D7_1473600 Pf3D7_14_v3 2997600 2997944 - 345 31 40 16 24
PF3D7_1014800 Pf3D7_10_v3 596497 600413 - 3917 29 24 16 12
PF3D7_1471900 Pf3D7_14_v3 2933162 2939779 - 6618 51 47 56 95
PF3D7_1026600 Pf3D7_10_v3 1113495 1118573 - 5079 47 47 136 218
PF3D7_0107600 Pf3D7_01_v3 314618 319405 + 4788 2 1 2 4
PF3D7_0922100 Pf3D7_09_v3 895415 900304 + 4890 491 385 444 565
PF3D7_1471000 Pf3D7_14_v3 2902134 2903537 + 1404 112 67 154 219
PF3D7_1429200 Pf3D7_14_v3 1144518 1148078 - 3561 3 6 113 155
PF3D7_0800100 Pf3D7_08_v3 21361 28653 + 7293 5 0 3 3
PF3D7_1416400 Pf3D7_14_v3 661098 665098 - 4001 6 9 5 13
PF3D7_0516200 Pf3D7_05_v3 675809 676614 - 806 1202 1321 877 858
PF3D7_1029600 Pf3D7_10_v3 1206302 1207405 + 1104 8832 10118 2473 2715
PF3D7_0517100 Pf3D7_05_v3 718425 719855 - 1431 66 69 25 25
PF3D7_1125200 Pf3D7_11_v3 989159 990301 - 1143 113 131 147 182
PF3D7_0520800 Pf3D7_05_v3 849862 856026 - 6165 144 124 128 166
PF3D7_1114800 Pf3D7_11_v3 558924 561032 - 2109 31 41 24 44
PF3D7_0805600 Pf3D7_08_v3 312034 312960 + 927 298 301 199 223
PF3D7_1242600 Pf3D7_12_v3 1800562 1802310 + 1749 53 58 66 78
PF3D7_0313500 Pf3D7_03_v3 548718 551453 + 2736 30 29 15 15
PF3D7_1320900 Pf3D7_13_v3 857147 857944 - 798 103 100 92 111
PF3D7_1209900 Pf3D7_12_v3 448772 451339 - 2568 128 111 95 132
PF3D7_1310700 Pf3D7_13_v3 468232 468663 - 432 78 143 263 268
PF3D7_1302400 Pf3D7_13_v3 129717 131086 - 1370 1 5 0 0
PF3D7_1300100 Pf3D7_13_v3 21364 28787 + 7424 26 15 18 18
PF3D7_1448000 Pf3D7_14_v3 1960033 1963962 - 3930 147 123 119 117
PF3D7_0614200 Pf3D7_06_v3 593172 595904 - 2733 44 60 26 30
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PF3D7_1317800 Pf3D7_13_v3 740527 741454 + 928 2103 2929 1153 1200
PF3D7_1010500 Pf3D7_10_v3 417705 419318 + 1614 7 4 2 6
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