Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Installation Apple M1 failure #302

Open
harmscho opened this issue Jul 28, 2022 · 1 comment
Open

Installation Apple M1 failure #302

harmscho opened this issue Jul 28, 2022 · 1 comment
Labels
build system

Comments

@harmscho
Copy link

I tried installing proposal in an apple M1 machine:
Darwin hin-1702c-2.local 21.3.0 Darwin Kernel Version 21.3.0: Wed Jan 5 21:37:58 PST 2022; root:xnu-8019.80.24~20/RELEASE_ARM64_T8101 arm64

using pip install proposal

which lead to the following error:

Collecting proposal
  Using cached proposal-7.3.1.tar.gz (678 kB)
  Installing build dependencies ... done
  Getting requirements to build wheel ... done
    Preparing wheel metadata ... done
Building wheels for collected packages: proposal
  Building wheel for proposal (PEP 517) ... error
  ERROR: Command errored out with exit status 1:
   command: /Users/harmscho/opt/miniconda3/envs/da/bin/python /Users/harmscho/opt/miniconda3/envs/da/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/tmpydritfce
       cwd: /private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-install-ty2xxsz5/proposal_d4b97b00b423451a81b4c9af0e24e7a6
  Complete output (166 lines):
  running bdist_wheel
  running build
  running build_ext
  WARN: Migration: Updating settings.yml
  Configuration:
  [settings]
  arch=x86_64
  arch_build=x86_64
  build_type=Release
  compiler=clang
  compiler.libcxx=libstdc++
  compiler.version=12
  os=Macos
  os_build=Macos
  [options]
  with_python=True
  with_testing=False
  [build_requires]
  [env]
  
  fmt/7.1.3: WARN: Package binary is corrupted, removing: f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a
  conanfile.py (proposal/None): Installing package
  Requirements
      boost/1.75.0 from 'conancenter' - Cache
      bzip2/1.0.8 from 'conancenter' - Cache
      cubicinterpolation/0.1.4 from 'conancenter' - Cache
      eigen/3.3.9 from 'conancenter' - Cache
      fmt/7.1.3 from 'conancenter' - Cache
      libbacktrace/cci.20210118 from 'conancenter' - Cache
      libiconv/1.16 from 'conancenter' - Cache
      nlohmann_json/3.9.1 from 'conancenter' - Cache
      pybind11/2.6.2 from 'conancenter' - Cache
      spdlog/1.8.2 from 'conancenter' - Cache
      zlib/1.2.12 from 'conancenter' - Cache
  Packages
      boost/1.75.0:05f173e0a060a8b3409d03bd067741c4ded83a2a - Build
      bzip2/1.0.8:a59fd117dd084c106270d4353396c78c7a6bff63 - Cache
      cubicinterpolation/0.1.4:0b83950c2defc486db639e2ce28076c8da932f77 - Build
      eigen/3.3.9:5ab84d6acfe1f23c4fae0ab88f26e3a396351ac9 - Cache
      fmt/7.1.3:f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a - Build
      libbacktrace/cci.20210118:a7d10f8ef501095831af5963d116fbc85c9001c6 - Build
      libiconv/1.16:a7d10f8ef501095831af5963d116fbc85c9001c6 - Build
      nlohmann_json/3.9.1:5ab84d6acfe1f23c4fae0ab88f26e3a396351ac9 - Cache
      pybind11/2.6.2:5ab84d6acfe1f23c4fae0ab88f26e3a396351ac9 - Cache
      spdlog/1.8.2:0f011f2bb5409eb603064d1c6cc6b035d68d7108 - Build
      zlib/1.2.12:a7d10f8ef501095831af5963d116fbc85c9001c6 - Build
  Build requirements
      b2/4.8.0 from 'conancenter' - Cache
  Build requirements packages
      b2/4.8.0:46f53f156846659bf39ad6675fa0ee8156e859fe - Cache
  
  Installing (downloading, building) binaries...
  b2/4.8.0: Already installed!
  bzip2/1.0.8: Already installed!
  bzip2/1.0.8: Appending PATH environment variable: /Users/harmscho/.conan/data/bzip2/1.0.8/_/_/package/a59fd117dd084c106270d4353396c78c7a6bff63/bin
  eigen/3.3.9: Already installed!
  fmt/7.1.3: WARN: Build folder is dirty, removing it: /Users/harmscho/.conan/data/fmt/7.1.3/_/_/build/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a
  fmt/7.1.3: Copying sources to build folder
  fmt/7.1.3: Building your package in /Users/harmscho/.conan/data/fmt/7.1.3/_/_/build/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a
  fmt/7.1.3: Generator txt created conanbuildinfo.txt
  fmt/7.1.3: Calling generate()
  fmt/7.1.3: WARN: Using the new toolchains and generators without specifying a build profile (e.g: -pr:b=default) is discouraged and might cause failures and unexpected behavior
  fmt/7.1.3: Aggregating env generators
  fmt/7.1.3: Calling build()
  fmt/7.1.3: CMake command: cmake -G "Unix Makefiles" -DCMAKE_TOOLCHAIN_FILE="/Users/harmscho/.conan/data/fmt/7.1.3/_/_/build/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a/build/generators/conan_toolchain.cmake" -DCMAKE_INSTALL_PREFIX="/Users/harmscho/.conan/data/fmt/7.1.3/_/_/package/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a" -DCMAKE_POLICY_DEFAULT_CMP0091="NEW" -DCMAKE_BUILD_TYPE="Release" -DFMT_DOC="False" -DFMT_TEST="False" -DFMT_INSTALL="True" -DFMT_LIB_DIR="lib" -DFMT_OS="True" "/Users/harmscho/.conan/data/fmt/7.1.3/_/_/build/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a/."
  -- CMake version: 3.22.5
  -- Using Conan toolchain: /Users/harmscho/.conan/data/fmt/7.1.3/_/_/build/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a/build/generators/conan_toolchain.cmake
  -- Conan toolchain: Setting CMAKE_POSITION_INDEPENDENT_CODE=ON (options.fPIC)
  -- Conan toolchain: Setting BUILD_SHARED_LIBS = OFF
  -- The CXX compiler identification is AppleClang 13.1.6.13160021
  -- Detecting CXX compiler ABI info
  -- Detecting CXX compiler ABI info - failed
  -- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++
  -- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ - broken
  CMake Error at /private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/cmake/data/CMake.app/Contents/share/cmake-3.22/Modules/CMakeTestCXXCompiler.cmake:62 (message):
    The C++ compiler
  
      "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++"
  
    is not able to compile a simple test program.
  
    It fails with the following output:
  
      Change Dir: /Users/harmscho/.conan/data/fmt/7.1.3/_/_/build/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a/build/Release/CMakeFiles/CMakeTmp
  
      Run Build Command(s):/usr/bin/make -f Makefile cmTC_a4712/fast && /Applications/Xcode.app/Contents/Developer/usr/bin/make  -f CMakeFiles/cmTC_a4712.dir/build.make CMakeFiles/cmTC_a4712.dir/build
      Building CXX object CMakeFiles/cmTC_a4712.dir/testCXXCompiler.cxx.o
      /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ -D_GLIBCXX_USE_CXX11_ABI=0  -m64 -stdlib=libstdc++  -arch x86_64 -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.3.sdk -fPIE -MD -MT CMakeFiles/cmTC_a4712.dir/testCXXCompiler.cxx.o -MF CMakeFiles/cmTC_a4712.dir/testCXXCompiler.cxx.o.d -o CMakeFiles/cmTC_a4712.dir/testCXXCompiler.cxx.o -c /Users/harmscho/.conan/data/fmt/7.1.3/_/_/build/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a/build/Release/CMakeFiles/CMakeTmp/testCXXCompiler.cxx
      clang: warning: include path for libstdc++ headers not found; pass '-stdlib=libc++' on the command line to use the libc++ standard library instead [-Wstdlibcxx-not-found]
      Linking CXX executable cmTC_a4712
      /private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/cmake/data/CMake.app/Contents/bin/cmake -E cmake_link_script CMakeFiles/cmTC_a4712.dir/link.txt --verbose=1
      /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ -m64 -stdlib=libstdc++  -arch x86_64 -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.3.sdk -Wl,-search_paths_first -Wl,-headerpad_max_install_names -m64  CMakeFiles/cmTC_a4712.dir/testCXXCompiler.cxx.o -o cmTC_a4712
      clang: warning: libstdc++ is deprecated; move to libc++ [-Wdeprecated]
      ld: library not found for -lstdc++
      clang: error: linker command failed with exit code 1 (use -v to see invocation)
      make[1]: *** [cmTC_a4712] Error 1
      make: *** [cmTC_a4712/fast] Error 2
  
  
  
  
  
    CMake will not be able to correctly generate this project.
  Call Stack (most recent call first):
    CMakeLists.txt:53 (project)
  
  
  -- Configuring incomplete, errors occurred!
  See also "/Users/harmscho/.conan/data/fmt/7.1.3/_/_/build/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a/build/Release/CMakeFiles/CMakeOutput.log".
  See also "/Users/harmscho/.conan/data/fmt/7.1.3/_/_/build/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a/build/Release/CMakeFiles/CMakeError.log".
  fmt/7.1.3:
  fmt/7.1.3: ERROR: Package 'f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a' build failed
  fmt/7.1.3: WARN: Build folder /Users/harmscho/.conan/data/fmt/7.1.3/_/_/build/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a/build/Release
  ERROR: fmt/7.1.3: Error in build() method, line 89
  	cmake.configure(variables=cache_entries)
  	ConanException: Error 1 while executing cmake -G "Unix Makefiles" -DCMAKE_TOOLCHAIN_FILE="/Users/harmscho/.conan/data/fmt/7.1.3/_/_/build/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a/build/generators/conan_toolchain.cmake" -DCMAKE_INSTALL_PREFIX="/Users/harmscho/.conan/data/fmt/7.1.3/_/_/package/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a" -DCMAKE_POLICY_DEFAULT_CMP0091="NEW" -DCMAKE_BUILD_TYPE="Release" -DFMT_DOC="False" -DFMT_TEST="False" -DFMT_INSTALL="True" -DFMT_LIB_DIR="lib" -DFMT_OS="True" "/Users/harmscho/.conan/data/fmt/7.1.3/_/_/build/f8a0658ec1a3cdef0beae5fded5a63d4853a8c9a/."
  Using conan to install dependencies. Set environment variable NO_CONAN to skip conan.
  Traceback (most recent call last):
    File "/Users/harmscho/opt/miniconda3/envs/da/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 349, in <module>
      main()
    File "/Users/harmscho/opt/miniconda3/envs/da/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 331, in main
      json_out['return_val'] = hook(**hook_input['kwargs'])
    File "/Users/harmscho/opt/miniconda3/envs/da/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 248, in build_wheel
      return _build_backend().build_wheel(wheel_directory, config_settings,
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/build_meta.py", line 244, in build_wheel
      return self._build_with_temp_dir(['bdist_wheel'], '.whl',
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/build_meta.py", line 229, in _build_with_temp_dir
      self.run_setup()
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/build_meta.py", line 174, in run_setup
      exec(code, locals())
    File "<string>", line 150, in <module>
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/__init__.py", line 87, in setup
      return distutils.core.setup(**attrs)
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/_distutils/core.py", line 177, in setup
      return run_commands(dist)
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/_distutils/core.py", line 193, in run_commands
      dist.run_commands()
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 968, in run_commands
      self.run_command(cmd)
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/dist.py", line 1217, in run_command
      super().run_command(command)
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 987, in run_command
      cmd_obj.run()
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/wheel/bdist_wheel.py", line 299, in run
      self.run_command('build')
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/_distutils/cmd.py", line 317, in run_command
      self.distribution.run_command(command)
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/dist.py", line 1217, in run_command
      super().run_command(command)
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 987, in run_command
      cmd_obj.run()
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/command/build.py", line 24, in run
      super().run()
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/_distutils/command/build.py", line 131, in run
      self.run_command(cmd_name)
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/_distutils/cmd.py", line 317, in run_command
      self.distribution.run_command(command)
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/dist.py", line 1217, in run_command
      super().run_command(command)
    File "/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-build-env-2a31puf3/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 987, in run_command
      cmd_obj.run()
    File "<string>", line 88, in run
    File "<string>", line 119, in build_cmake
    File "/Users/harmscho/opt/miniconda3/envs/da/lib/python3.9/subprocess.py", line 528, in run
      raise CalledProcessError(retcode, process.args,
  subprocess.CalledProcessError: Command '['conan', 'install', '/private/var/folders/qb/7np03l893q3dxqy0k3zz497w0000gn/T/pip-install-ty2xxsz5/proposal_d4b97b00b423451a81b4c9af0e24e7a6', '-o with_python=True', '-o with_testing=False', '--build=missing']' returned non-zero exit status 1.
  ----------------------------------------
  ERROR: Failed building wheel for proposal
Failed to build proposal
ERROR: Could not build wheels for proposal which use PEP 517 and cannot be installed directly
@Jean1995
Copy link
Member

I would assume that conan is unable to detect the correct profile for your M1 system (similar to issue #299).

My first idea to fix this problem would be to adapt the conan profile. At the moment, it shows x86_64 as the system architecture, although it should probably be armv8.

This can be changed with the command

conan profile update settings.arch=armv8 default 
conan profile update settings.arch_build=armv8 default

and trying to install proposal again.

If this doesn't work already, I am also not sure whether the compiler.libcxx setting is correct. On other M1 systems, this has worked with libc++ instead of libstdc++. This can be changed with

conan profile update settings.compiler.libcxx=libc++ default

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
build system
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@harmscho @Jean1995