Fixes some formatting issues

tomaroberts · Feb 21, 2024 · 765af04 · 765af04
1 parent 54e783b
commit 765af04
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Showing 4 changed files with 5 additions and 6 deletions.
diff --git a/nii2dcm/__main__.py b/nii2dcm/__main__.py
@@ -24,7 +24,7 @@ def cli(args=None):
     parser.add_argument("input_file", type=str, help="[.nii/.nii.gz] input NIfTI file")
     parser.add_argument("output_dir", type=str, help="[directory] output DICOM path")
     parser.add_argument(
-        "-d","--dicom_type",
+        "-d", "--dicom_type",
         type=str,
         help="[string] type of DICOM. Available types: MR, SVR."
     )

diff --git a/nii2dcm/_version.py b/nii2dcm/_version.py
@@ -1,2 +1,2 @@
 import dunamai as _dunamai
-__version__ = _dunamai.get_version("nii2dcm", third_choice=_dunamai.Version.from_any_vcs).serialize()
+__version__ = _dunamai.get_version("nii2dcm", third_choice=_dunamai.Version.from_any_vcs).serialize()
diff --git a/nii2dcm/dcm.py b/nii2dcm/dcm.py
@@ -11,7 +11,6 @@
 import pydicom as pyd
 from pydicom.dataset import FileDataset, FileMetaDataset
 
-from nii2dcm.utils import dcm_dictionary_update
 from nii2dcm.modules.patient import Patient
 from nii2dcm.modules.general_study import GeneralStudy
 from nii2dcm.modules.patient_study import PatientStudy
@@ -67,7 +66,7 @@ def __init__(self, filename=nii2dcm_temp_filename):
 
         """
         Set Dicom Date/Time
-        Important: doing this once sets all Instances/Series/Study creation dates and times to the same values. Whereas, 
+        Important: doing this once sets all Instances/Series/Study creation dates and times to the same values. Whereas,
         doing this within the Modules would every so slightly offset the times
         """
         # TODO shift to utils.py and propagate to Modules, or, create method within this Dicom class

diff --git a/nii2dcm/modules/mr_image.py b/nii2dcm/modules/mr_image.py
@@ -24,9 +24,9 @@ def __init__(self):
         # https://dicom.nema.org/medical/Dicom/current/output/chtml/part03/sect_C.8.3.html#sect_C.8.3.1.1.1
         # For now, will omit thereby inheriting parent value
         # self.ds.ImageType = ''
-    
+
         self.ds.SamplesPerPixel = 1
-    
+
         # PhotometricInterpretation
         # TODO: decide MONOCHROME1 or MONOCHROME2 as default
         # https://dicom.nema.org/medical/Dicom/current/output/chtml/part03/sect_C.7.6.3.html#sect_C.7.6.3.1.2