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.gitignore
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bamm/*.pyc
bamm/libBamM.a
bamm/tests/*.pyc
build/
c/*.o
c/Makefile
c/aclocal.m4
c/autom4te.cache/
c/config.h
c/config.h.in~
c/config.log
c/config.status
c/htslib-1.[23].1/*.o
c/htslib-1.[23].1/*.pico
c/htslib-1.[23].1/autom4te.cache/
c/htslib-1.[23].1/bgzip
c/htslib-1.[23].1/config.h.in~
c/htslib-1.[23].1/config.log
c/htslib-1.[23].1/config.mk
c/htslib-1.[23].1/config.status
c/htslib-1.[23].1/cram/*.o
c/htslib-1.[23].1/cram/*.pico
c/htslib-1.[23].1/htsfile
c/htslib-1.[23].1/libhts.a
c/htslib-1.[23].1/libhts.so
c/htslib-1.[23].1/libhts.so.1
c/htslib-1.[23].1/tabix
c/htslib-1.[23].1/test/*.o
c/htslib-1.[23].1/test/fieldarith
c/htslib-1.[23].1/test/hfile
c/htslib-1.[23].1/test/sam
c/htslib-1.[23].1/test/test-regidx
c/htslib-1.[23].1/test/test-vcf-api
c/htslib-1.[23].1/test/test-vcf-sweep
c/htslib-1.[23].1/test/test_view
c/htslib-1.[23].1/version.h
c/libBamM.a
c/libcfu-0.03/Makefile
c/libcfu-0.03/aclocal.m4
c/libcfu-0.03/autom4te.cache/
c/libcfu-0.03/config.log
c/libcfu-0.03/config.status
c/libcfu-0.03/lib/
c/libcfu-0.03/libtool
c/libcfu-0.03/src/*.o
c/libcfu-0.03/src/.deps/
c/libcfu-0.03/src/Makefile
c/libcfu-0.03/src/libcfu.a
dist/
lib/