From d4d7a63cb61f51408d9391ea24f2c525409b5e1f Mon Sep 17 00:00:00 2001
From: KriBaLin <136562563+KriBaLin@users.noreply.github.com>
Date: Tue, 15 Aug 2023 11:11:22 +0200
Subject: [PATCH] Changed regex for calculation of percent hemoglobulin genes

---
 jupyter-book/preprocessing_visualization/quality_control.ipynb | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/jupyter-book/preprocessing_visualization/quality_control.ipynb b/jupyter-book/preprocessing_visualization/quality_control.ipynb
index 3681ded0..1f970a49 100644
--- a/jupyter-book/preprocessing_visualization/quality_control.ipynb
+++ b/jupyter-book/preprocessing_visualization/quality_control.ipynb
@@ -205,7 +205,7 @@
     "# ribosomal genes\n",
     "adata.var[\"ribo\"] = adata.var_names.str.startswith((\"RPS\", \"RPL\"))\n",
     "# hemoglobin genes.\n",
-    "adata.var[\"hb\"] = adata.var_names.str.contains((\"^HB[^(P)]\"))"
+    "adata.var[\"hb\"] = adata.var_names.str.contains((\"^HB(?!EGF|S1L|P1).+\"))"
    ]
   },
   {