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main.yml
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name: BuildAntimony
on:
push:
branches:
- develop
pull_request:
branches:
- '**'
jobs:
build_on_OSs:
name: Build Antimony on ${{ matrix.platform.name }}
strategy:
fail-fast: false
matrix:
platform:
- name: macos-11-release
os_type: macos
os_name: macos-11
arch: x86_64
build_type: Release
build_python: ON
build_qt_antimony: ON
- name: macos-11-debug
os_type: macos
os_name: macos-11
arch: x86_64
build_type: Debug
build_python: ON
build_qt_antimony: ON
- name: ubuntu-latest-release
os_type: ubuntu
os_name: ubuntu-latest
build_type: Release
build_python: ON
build_qt_antimony: ON
- name: ubuntu-latest-debug
os_type: ubuntu
os_name: ubuntu-latest
build_type: Debug
build_python: ON
build_qt_antimony: ON
- name: windows-latest-release
os_type: windows
os_name: windows-latest
expat_lib_name: libexpatmd.lib
build_type: Release
build_python: ON
build_qt_antimony: ON
- name: windows-latest-debug
os_type: windows
os_name: windows-latest
expat_lib_name: libexpatdMD.lib
build_type: Debug
build_python: OFF
build_qt_antimony: ON
- name: manylinux2014-release
os_type: manylinux
os_name: ubuntu-latest
container_image: quay.io/pypa/manylinux2014_x86_64
build_type: Release
build_python: ON
build_qt_antimony: OFF
- name: manylinux2014-debug
os_type: manylinux
os_name: ubuntu-latest
container_image: quay.io/pypa/manylinux2014_x86_64
build_type: Debug
build_python: ON
build_qt_antimony: OFF
libroadrunner_deps_owner: [ "sys-bio" ]
libroadrunner_deps_repo: [ "libroadrunner-deps" ]
libroadrunner_deps_release_version: [ "v2.1.1" ]
python_version: [ "3.11" ]
runs-on: ${{ matrix.platform.os_name }}
container:
image: ${{ matrix.platform.container_image || '' }}
steps:
- name: Checkout Antimony
uses: actions/checkout@v3
- name: Set MSVC as the default compiler on Windows
if: matrix.platform.os_type == 'windows'
uses: ilammy/[email protected]
- name: Upgrade gcc on ManyLinux
if: matrix.platform.os_type == 'manylinux'
shell: bash
run: |
yum install -y centos-release-scl
yum install -y devtoolset-11
scl enable devtoolset-11 bash
echo "/opt/rh/devtoolset-11/root/usr/bin" >> $GITHUB_PATH
- name: Setup Ninja
uses: seanmiddleditch/gha-setup-ninja@master
- name: Install ccache
shell: bash
run: |
cd ${RUNNER_WORKSPACE}
if [ "${{ matrix.platform.os_type }}" == 'macos' ]; then
brew install ccache
elif [ "${{ matrix.platform.os_type }}" == 'ubuntu' ]; then
sudo apt-get update
sudo apt-get install -y ccache
elif [ "${{ matrix.platform.os_type }}" == 'manylinux' ]; then
mkdir -p ccache
cd ccache
curl -L https://github.com/ccache/ccache/releases/download/v4.9.1/ccache-4.9.1.tar.gz > ccache.tar.gz
tar -zxf ccache.tar.gz
rm ccache.tar.gz
mkdir -p build-ccache
mkdir -p install-ccache
cd build-ccache
cmake -DCMAKE_INSTALL_PREFIX="$RUNNER_WORKSPACE/ccache/install-ccache" -DCMAKE_BUILD_TYPE=Release ../ccache-4.9.1
cmake --build . --target install
echo "$RUNNER_WORKSPACE/ccache/install-ccache/bin" >> $GITHUB_PATH
fi
- name: Prepare ccache timestamp on non-Windows platforms
if: matrix.platform.os_type != 'windows'
id: ccache_cache_timestamp
shell: cmake -P {0}
run: |
string(TIMESTAMP current_date "%Y-%m-%d-%H;%M;%S" UTC)
message("::set-output name=timestamp::${current_date}")
- name: Set ccache cache directory on non-Windows
if: matrix.platform.os_type != 'windows'
shell: bash
run: |
cd ${RUNNER_WORKSPACE}
echo "CCACHE_DIR=${RUNNER_WORKSPACE}/.ccache" >> "${GITHUB_ENV}"
echo "COMPILER_LAUNCHER=ccache" >> "${GITHUB_ENV}"
- name: Cache ccache files on non-Windows
if: matrix.platform.os_type != 'windows'
uses: actions/cache@v3
with:
path: ${RUNNER_WORKSPACE}/.ccache
key:
${{ runner.os }}-${{ steps.ccache_cache_timestamp.outputs.timestamp
}}
restore-keys: |
${{ runner.os }}-${{ steps.ccache_cache_timestamp.outputs.timestamp }}
${{ runner.os }}-
- name: Setup Python for non-Manylinux platforms
if: matrix.platform.build_python == 'ON' && matrix.platform.os_type != 'manylinux'
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python_version }}
- name: Setup Python for Manylinux platforms
if: matrix.platform.build_python == 'ON' && matrix.platform.os_type == 'manylinux'
shell: bash
run: |
cd ${RUNNER_WORKSPACE}
yum update -y
yum install -y gcc openssl-devel bzip2-devel libffi-devel epel-release openssl11-devel
mkdir -p python${{ matrix.python_version }}
cd python${{ matrix.python_version }}
curl -L https://www.python.org/ftp/python/${{ matrix.python_version }}.0/Python-${{ matrix.python_version }}.0.tgz > python.tgz
tar -zxf python.tgz
rm python.tgz
cd Python-${{ matrix.python_version }}.0
sed -i 's/PKG_CONFIG openssl /PKG_CONFIG openssl11 /g' configure
mkdir -p install-python
if [ -z "$CFLAGS" ]; then
export CFLAGS="-fPIC"
else
export CFLAGS="$CFLAGS -fPIC"
fi
./configure --enable-optimizations --prefix=${RUNNER_WORKSPACE}/python${{ matrix.python_version }}/install-python
make install
echo "${RUNNER_WORKSPACE}/python${{ matrix.python_version }}/install-python/bin" >> "${GITHUB_PATH}"
- name: Download dependencies binaries
shell: bash
run: |
cd ${RUNNER_WORKSPACE}
mkdir -p libroadrunner-deps-binaries
cd libroadrunner-deps-binaries
curl -L "https://github.com/${{ matrix.libroadrunner_deps_owner }}/${{ matrix.libroadrunner_deps_repo }}/releases/download/${{ matrix.libroadrunner_deps_release_version }}/${{ matrix.libroadrunner_deps_repo }}-${{ matrix.platform.name }}.zip" > libroadrunner-deps-${{ matrix.platform.name }}.zip
unzip -q libroadrunner-deps-${{ matrix.platform.name }}.zip -d libroadrunner-deps-${{ matrix.platform.name }}
rm libroadrunner-deps-${{ matrix.platform.name }}.zip
echo LIBSBML_INSTALL_DIR="-DLIBSBML_INSTALL_DIR=${RUNNER_WORKSPACE}/libroadrunner-deps-binaries/libroadrunner-deps-${{ matrix.platform.name }}" >> "${GITHUB_ENV}"
if [ "${{ matrix.platform.os_type }}" == 'windows' ]; then
echo EXPAT_LIBRARY="-DEXPAT_LIBRARY=${RUNNER_WORKSPACE}/libroadrunner-deps-binaries/libroadrunner-deps-${{ matrix.platform.name }}/lib/${{ matrix.platform.expat_lib_name }}" >> "${GITHUB_ENV}"
fi
- name: Install libcheck
shell: bash
run: |
cd ${RUNNER_WORKSPACE}
mkdir -p check
cd check
if [ "${{ matrix.platform.os_type }}" == 'windows' ]; then
curl -L https://github.com/sys-bio/antimony/releases/download/libcheck/check-${{ matrix.platform.build_type }}.zip > check.zip
unzip -q check.zip -d check
rm check.zip
echo LIBCHECK_INCLUDE_DIR="-DLIBCHECK_INCLUDE_DIR=${RUNNER_WORKSPACE}/check/check/include" >> "${GITHUB_ENV}"
echo LIBCHECK_LIBRARY="-DLIBCHECK_LIBRARY=${RUNNER_WORKSPACE}/check/check/lib/libcheck.lib" >> "${GITHUB_ENV}"
else
curl -L https://github.com/libcheck/check/releases/download/0.15.2/check-0.15.2.tar.gz > check.tar.gz
tar -zxf check.tar.gz
rm check.tar.gz
mkdir -p build-check
mkdir -p install-check
cd build-check
cmake -G "Ninja" -DCMAKE_INSTALL_PREFIX="${RUNNER_WORKSPACE}/check/install-check" -DCMAKE_BUILD_TYPE=Release -DCMAKE_OSX_ARCHITECTURES=${{ matrix.platform.arch }} ../check-0.15.2
cmake --build . --target install
echo LIBCHECK_INCLUDE_DIR="-DLIBCHECK_INCLUDE_DIR=${RUNNER_WORKSPACE}/check/install-check/include" >> "${GITHUB_ENV}"
if [ "${{ matrix.platform.os_type }}" == 'manylinux' ]; then
echo LIBCHECK_LIBRARY="-DLIBCHECK_LIBRARY=${RUNNER_WORKSPACE}/check/install-check/lib64/libcheck.so" >> "${GITHUB_ENV}"
else
echo LIBCHECK_LIBRARY="-DLIBCHECK_LIBRARY=${RUNNER_WORKSPACE}/check/install-check/lib/libcheck.a" >> "${GITHUB_ENV}"
fi
fi
- name: Install Qt
if : matrix.platform.build_qt_antimony == 'ON'
uses: jurplel/install-qt-action@v3
with:
version: '5.15.2'
- name: Create build directory
shell: bash
run: mkdir -p ${RUNNER_WORKSPACE}/build-antimony
- name: Configure CMake for Antimony
shell: bash
run: |
cd ${RUNNER_WORKSPACE}/build-antimony
cmake $GITHUB_WORKSPACE \
-G "Ninja" \
-DCMAKE_C_COMPILER_LAUNCHER=${COMPILER_LAUNCHER} \
-DCMAKE_CXX_COMPILER_LAUNCHER=${COMPILER_LAUNCHER} \
-DCMAKE_BUILD_TYPE=${{ matrix.platform.build_type }} \
-DUSE_UNIVERSAL_BINARIES=OFF \
-DCMAKE_OSX_ARCHITECTURES=${{ matrix.platform.arch }} \
-DCMAKE_INSTALL_PREFIX="${RUNNER_WORKSPACE}/install-antimony" \
-DWITH_STATIC_SBML=ON \
${LIBSBML_INSTALL_DIR} \
-DWITH_QTANTIMONY=${{ matrix.platform.build_qt_antimony }} \
-DWITH_LIBSBML_EXPAT=ON \
${EXPAT_LIBRARY} \
-DWITH_LIBSBML_LIBXML=OFF \
-DWITH_CHECK=ON \
${LIBCHECK_INCLUDE_DIR} \
${LIBCHECK_LIBRARY} \
-DWITH_PYTHON=${{ matrix.platform.build_python }}
- name: Build and install Antimony
shell: bash
run: |
cd ${RUNNER_WORKSPACE}/build-antimony
cmake --build . --target install --config ${{ matrix.platform.build_type }}
- name: Run Antimony tests
if : matrix.platform.build_type == 'Release'
shell: bash
run: |
cd ${RUNNER_WORKSPACE}/build-antimony
ctest -C ${{ matrix.platform.build_type }} --output-on-failure --verbose --extra-verbose --progress
- name: Set artifacts path and name
shell: bash
run: |
cd ${RUNNER_WORKSPACE}
echo "artifacts_name=antimony-${{ matrix.platform.name }}" >> "${GITHUB_ENV}"
# we need to use relative path as actions/upload-artifact@v1 cannot find it on containerized runners
echo "artifacts_path=../install-antimony" >> "${GITHUB_ENV}"
- name: Upload Antimony binaries
uses: actions/upload-artifact@v1
with:
name: ${{env.artifacts_name}}
path: ${{env.artifacts_path}}
- name: Create Python wheel artifacts
if: matrix.platform.build_type == 'Release' && matrix.platform.build_python == 'ON'
shell: bash
run: |
cd ${RUNNER_WORKSPACE}/install-antimony/bindings/python
if [ "${{ matrix.platform.os_type }}" == 'windows' ]; then
python -m pip install setuptools wheel
python setup.py bdist_wheel
elif [ "${{ matrix.platform.os_type }}" == 'manylinux' ]; then
python${{ matrix.python_version }} -m pip install --trusted-host pypi.org --trusted-host pypi.python.org --trusted-host files.pythonhosted.org setuptools wheel
python${{ matrix.python_version }} setup.py bdist_wheel
else
python${{ matrix.python_version }} -m pip install setuptools wheel
python${{ matrix.python_version }} setup.py bdist_wheel
fi
- name: Set Python wheel artifacts path and name
if: matrix.platform.build_type == 'Release' && matrix.platform.build_python == 'ON'
shell: bash
run: |
cd ${RUNNER_WORKSPACE}
echo "python_wheel_artifacts_name=antimony-${{ matrix.platform.name }}-py3-none-wheel-file" >> "${GITHUB_ENV}"
# we need to use relative path as actions/upload-artifact@v1 cannot find it on containerized runners
echo "python_wheel_artifacts_path=../install-antimony/bindings/python/dist" >> "${GITHUB_ENV}"
- name: Upload Python wheel artifacts
if: matrix.platform.build_type == 'Release' && matrix.platform.build_python == 'ON'
uses: actions/upload-artifact@v1
with:
name: ${{env.python_wheel_artifacts_name}}
path: ${{env.python_wheel_artifacts_path}}