From b4beb2a1ebd5b3aae36b3d39348fc58137963e38 Mon Sep 17 00:00:00 2001 From: Abbie Watson Date: Mon, 2 Oct 2023 20:58:09 -0500 Subject: [PATCH] removed 'codes' field from symptoms --- src/main/resources/modules/menstrual_cycle.json | 9 +-------- src/main/resources/modules/wearables_circadian.json | 9 +-------- src/main/resources/modules/wearables_ecg.json | 12 ++++-------- src/main/resources/modules/wearables_o2.json | 9 +-------- 4 files changed, 7 insertions(+), 32 deletions(-) diff --git a/src/main/resources/modules/menstrual_cycle.json b/src/main/resources/modules/menstrual_cycle.json index 7b7c76e3f5..bbebbca82d 100644 --- a/src/main/resources/modules/menstrual_cycle.json +++ b/src/main/resources/modules/menstrual_cycle.json @@ -134,14 +134,7 @@ "type": "Symptom", "symptom": "Cramps", "cause": "Endometriosis", - "direct_transition": "Menstrual_Cramps_Symptom_Ends", - "codes": [ - { - "system": "SNOMED-CT", - "code": 431416001, - "display": "Menstrual cramp (finding)" - } - ] + "direct_transition": "Menstrual_Cramps_Symptom_Ends" }, "Menstrual_Cramps_Symptom_Ends": { "type": "Symptom", diff --git a/src/main/resources/modules/wearables_circadian.json b/src/main/resources/modules/wearables_circadian.json index defc9ceeaf..03efe97fa8 100644 --- a/src/main/resources/modules/wearables_circadian.json +++ b/src/main/resources/modules/wearables_circadian.json @@ -183,14 +183,7 @@ "type": "Symptom", "symptom": "Insomnia", "cause": "Sleep_Apnea", - "direct_transition": "Insomia_Symptom_Ends", - "codes": [ - { - "system": "SNOMED-CT", - "code": 193462001, - "display": "Insomnia (disorder)" - } - ] + "direct_transition": "Insomia_Symptom_Ends" }, "Insomia_Symptom_Ends": { "type": "Symptom", diff --git a/src/main/resources/modules/wearables_ecg.json b/src/main/resources/modules/wearables_ecg.json index 0fc1f2041a..4cdaa47c24 100644 --- a/src/main/resources/modules/wearables_ecg.json +++ b/src/main/resources/modules/wearables_ecg.json @@ -15,6 +15,9 @@ "Physical Activity and Health: A Report of the Surgeon General", "https://www.cdc.gov/nccdphp/sgr/adults.htm", "", + "Prevalence of Sedentary Behavior in Older Adults: A Systematic Review", + "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3881132/", + "", "Known model limitations:", "- This module is Apple centric, and may not model biomarkers found in Garmin devices, Fitbits, and other wearables (yet).", "- Most biomarkers are still modeled with Markov chains, and not yet connected to the Biomodel partial differential equation models.", @@ -191,14 +194,7 @@ "type": "Symptom", "symptom": "Stiffness", "cause": "Sedentary_Lifestyle", - "direct_transition": "Sedentary_Symptom1_Ends", - "codes": [ - { - "system": "SNOMED-CT", - "code": 271587009, - "display": "Stiffness (finding)" - } - ] + "direct_transition": "Sedentary_Symptom1_Ends" }, "Sedentary_Symptom1_Ends": { "type": "Symptom", diff --git a/src/main/resources/modules/wearables_o2.json b/src/main/resources/modules/wearables_o2.json index dc732a9c80..158d2b5598 100644 --- a/src/main/resources/modules/wearables_o2.json +++ b/src/main/resources/modules/wearables_o2.json @@ -182,14 +182,7 @@ "type": "Symptom", "symptom": "Snoring", "cause": "Sleep_Apnea", - "direct_transition": "Snoring_Ends", - "codes": [ - { - "system": "SNOMED-CT", - "code": 72863001, - "display": "Snoring (finding)" - } - ] + "direct_transition": "Snoring_Ends" }, "Snoring_Ends": { "type": "Symptom",