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plotGeneCount using only one lineage #268

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Yanst86 opened this issue Dec 16, 2024 · 0 comments
Open

plotGeneCount using only one lineage #268

Yanst86 opened this issue Dec 16, 2024 · 0 comments

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@Yanst86
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Yanst86 commented Dec 16, 2024

Hi,

Thanks for the great package!
I have a dataset of ~3100 cells with 6 different lineages inferred by Slingshot, however I was interested in only one of them and followed the suggestions in issue #187 to run fitGAM only on cells from the relevant lineage. Does someone have an idea how can I plot only this specific lineage (the default is to plot all) using plotGeneCount?

Thanks,
Yan

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