-
Notifications
You must be signed in to change notification settings - Fork 6
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Missing data files #1
Comments
<!--
/* Font Definitions */
@font-face
{font-family:Helvetica;
panose-1:0 0 0 0 0 0 0 0 0 0;}
@font-face
{font-family:"Cambria Math";
panose-1:2 4 5 3 5 4 6 3 2 4;}
@font-face
{font-family:"Yu Gothic";
panose-1:2 11 4 0 0 0 0 0 0 0;}
@font-face
{font-family:Calibri;
panose-1:2 15 5 2 2 2 4 3 2 4;}
@font-face
{font-family:"Times New Roman \(Body CS\)";
panose-1:2 11 6 4 2 2 2 2 2 4;}
@font-face
***@***.*** Gothic";
panose-1:2 11 4 0 0 0 0 0 0 0;}
/* Style Definitions */
p.MsoNormal, li.MsoNormal, div.MsoNormal
{margin:0cm;
font-size:11.0pt;
font-family:"Calibri",sans-serif;}
a:link, span.MsoHyperlink
{mso-style-priority:99;
color:blue;
text-decoration:underline;}
span.EmailStyle19
{mso-style-type:personal-reply;
font-family:Helvetica;
color:windowtext;}
.MsoChpDefault
{mso-style-type:export-only;
font-size:10.0pt;}
@page WordSection1
{size:612.0pt 792.0pt;
margin:72.0pt 72.0pt 72.0pt 72.0pt;}
div.WordSection1
{page:WordSection1;}
-->Hi Peter, My apologies for replying to this so late. It has been quite a hectic start to term this year. These files are too large for us to host on github. In fact, the wgs.R1.fasta.gz file is just placeholder file for the tutorial – you could use any fastq file for this. Please see Joana’s 2018 Molecular Ecology paper for links for the full dataset and also the reference genome. Best wishes Mark From: pedur1 ***@***.***>Date: Saturday, 16 October 2021 at 04:45To: speciationgenomics/data ***@***.***>Cc: Subscribed ***@***.***>Subject: [speciationgenomics/data] Missing data files (#1)Hello Joana / MarkI came across your excellent tutorial on analyzing NGS data using Linux - and have been working y way through itthe "Learning Unix" section was all fine, but when I got to "Handling NGS data", there seems to be some missing data files.For example, I cold not find wgs.R1.fastq.gz and P_nyererei_v2.fasta.gz are not in the data section.Have they been removed or renamed?Or am I looking in the wrong place?thanksPeter—You are receiving this because you are subscribed to this thread.Reply to this email directly, view it on GitHub, or unsubscribe.Triage notifications on the go with GitHub Mobile for iOS or Android.
|
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Hello Joana / Mark
I came across your excellent tutorial on analyzing NGS data using Linux - and have been working my way through it
the "Learning Unix" section was all fine, but when I got to "Handling NGS data", there seems to be some missing data files.
For example, I could not find wgs.R1.fastq.gz and P_nyererei_v2.fasta.gz was not in the data section.
Have these files been removed or renamed?
Or am I looking in the wrong place?
thanks
Peter
The text was updated successfully, but these errors were encountered: