From b3e607765e4af9d7786c83265e2289cc8e0f7a2e Mon Sep 17 00:00:00 2001 From: Alex Lederer Date: Mon, 20 May 2024 15:23:17 +0200 Subject: [PATCH] update yml --- _quarto.yml | 4 ++-- course_schedule.qmd | 4 ++-- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/_quarto.yml b/_quarto.yml index 51fc87f..2df427f 100644 --- a/_quarto.yml +++ b/_quarto.yml @@ -20,8 +20,8 @@ website: - href: course_schedule.qmd - text: "day 1" menu: - - href: "ipynb/day1-1_setup.qmd" - - href: "ipynb/day1-1a_cellranger.qmd" + - href: "ipynb/day1-1_setup.md" + - href: "ipynb/day1-1a_cellranger.md" - href: "ipynb/day1-2_analysis_tools_qc.ipynb" - href: "ipynb/day1-3_normalization_scaling.ipynb" - text: "day 2" diff --git a/course_schedule.qmd b/course_schedule.qmd index 199e125..e3b2c3c 100644 --- a/course_schedule.qmd +++ b/course_schedule.qmd @@ -15,7 +15,7 @@ title: "Course schedule" | | 10:15 AM | 10:45 AM | BREAK | | block 2 | 10:45 AM | 12:00 PM | Presentation: Andreia Gouvêa, 10X Field Application Scientist | | | 12:00 PM | 1:00 PM | BREAK | -| block 3 | 1:00 PM | 3:00 PM | [Cell Ranger and Quality Control](ipynb/day1-2_analysis_tools_qc.ipynb) | +| block 3 | 1:00 PM | 3:00 PM | [Cell Ranger](iypnb/day1-1a_cellranger.iypnb) and [Quality Control](ipynb/day1-2_analysis_tools_qc.ipynb) | | | 3:00 PM | 3:30 PM | BREAK | | block 4 | 3:30 PM | 5:00 PM | [Normalization and Scaling](ipynb/day1-3_normalization_scaling.ipynb) @@ -28,7 +28,7 @@ title: "Course schedule" | | 10:30 AM | 11:00 AM | BREAK | | block 2 | 11:00 AM | 12:30 PM | [Clustering](ipynb/day2-3_clustering.ipynb) | | | 12:30 PM | 1:30 PM | BREAK | -| block 3 | 1:30 PM | 3:00 PM | [Cell annotation](ipynb/day2-3_clustering.ipynb) | +| block 3 | 1:30 PM | 3:00 PM | [Cell annotation](ipynb/day2-4_visualization.ipynb) | | | 3:00 PM | 3:30 PM | BREAK | | block 4 | 3:30 PM | 5:00 PM | [Visualization & further exercises](ipynb/day2-4.visualization.ipynb) |