manifest.json

{
  "name": "dwi-split-shells",
  "label": "SCITRAN: DWI Split Shells",
  "description": "Extract individual diffusion shells from multi-shell DWI data. Output includes a NIfTI, BVEC, and BVAL file for each diffusion shell found in the data. By default this gear will normalize the bvalues (e.g., b=998 will become b=1000).",
  "author": "GLU <glerma@stanford.edu>",
  "maintainer": "GLU <glerma@stanford.edu>",
  "url": "https://github.com/scitran-apps/dwi-split-shells",
  "source": "https://github.com/scitran-apps/dwi-split-shells",
  "license": "MIT",
  "flywheel": "0",
  "version": "2.0.0",
  "custom": {
    "docker-image": "scitran/dwi-split-shells:2.0.0"
  },
  "config": {
    "doNorm": {
      "default": true,
      "type": "boolean",
      "description": "Normalize the bValues. (true/false, default=true)"
    }
  },
  "inputs": {
    "bval": {
      "base": "file",
      "description": "Multi-Shell BVAL text file.",
      "type": {
        "enum": [
          "bval"
        ]
      }
    },
    "bvec": {
      "base": "file",
      "description": "Multi-Shell BVAL text file.",
      "type": {
        "enum": [
          "bvec"
        ]
      }
    },
    "dwi": {
      "base": "file",
      "description": "Multi-Shell DWI NIfTI file.",
      "type": {
        "enum": [
          "nifti"
        ]
      }
    }
  }
}