SPM analysis (JJ)

The aim of this session is to analyse the data using SPM.

SPM download https://www.fil.ion.ucl.ac.uk/spm/software/

SPM 12 manual https://www.fil.ion.ucl.ac.uk/spm/doc/manual.pdf

The plan for here is

Start up SPM12
Run the preprocessing and check the outcomes from each step
Run the general linear model (GLM) analysis
Check the results

Warm up

Display the MPRAGE image using 'Display'

Set up the analysis using the GUI

Start up 'spm fmri'
preprocessing
1. Realign
2. Slice timing
3. Coregister
4. Segment
5. Normalise
6. Smooth
Specify 1^st^ level (GLM)
Results

Notes

installing SPM (toolboxes, paths, etc)