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There are several posts addressing the specific error I encountered, none of the solutions suggested in them have worked. I installed seuratdata using devtools, looked in availabledata() to find stxBrain, but when I went to install data I got this:
InstallData("stxBrain")
Using cached data manifest, last updated at 2022-08-04 10:08:24
Error: No access to remote SeuratData repository, unable to install new datasets
Another thing to note that may be important is that the first time I tried to use devtools to install seuratdata I was met with the following error:
devtools::install_github('satijalab/seurat-data')
Downloading GitHub repo satijalab/seurat-data@HEAD
Error in utils::download.file(url, path, method = method, quiet = quiet, :
cannot open URL 'https://api.github.com/repos/satijalab/seurat-data/tarball/HEAD'
which I fixed by running:
options(download.file.method = "wininet").
I'm not sure if this is the right forum to address this issue or if I have labeled it correctly, but any assistance would be extremely helpful.
The text was updated successfully, but these errors were encountered:
InstallData("stxBrain") Using cached data manifest, last updated at 2023-08-16 00:12:41.375431
Error: No access to remote SeuratData repository, unable to install new datasets
There are several posts addressing the specific error I encountered, none of the solutions suggested in them have worked. I installed seuratdata using devtools, looked in availabledata() to find stxBrain, but when I went to install data I got this:
InstallData("stxBrain")
Using cached data manifest, last updated at 2022-08-04 10:08:24
Error: No access to remote SeuratData repository, unable to install new datasets
Another thing to note that may be important is that the first time I tried to use devtools to install seuratdata I was met with the following error:
devtools::install_github('satijalab/seurat-data')
Downloading GitHub repo satijalab/seurat-data@HEAD
Error in utils::download.file(url, path, method = method, quiet = quiet, :
cannot open URL 'https://api.github.com/repos/satijalab/seurat-data/tarball/HEAD'
which I fixed by running:
options(download.file.method = "wininet").
I'm not sure if this is the right forum to address this issue or if I have labeled it correctly, but any assistance would be extremely helpful.
The text was updated successfully, but these errors were encountered: