From 1a71c0c3a2f02d0acdfe6022223fe94ed166ef32 Mon Sep 17 00:00:00 2001 From: barakr Date: Thu, 2 Nov 2023 13:33:08 +0200 Subject: [PATCH] different default --- data/npctransport.proto | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/data/npctransport.proto b/data/npctransport.proto index 527c39b..9194b58 100644 --- a/data/npctransport.proto +++ b/data/npctransport.proto @@ -131,7 +131,7 @@ message Configuration { optional int32 is_xyz_hist_stats=35 [default=1]; // whether to use an xyz histogram instead of zr histogram (= whether to project x and y to sqrt(x^2+y^2) optional double xyz_stats_crop_factor=40 [default=0.5]; // percentage of box to crop from each axis for xyz histogram (symmetrically), before adding 5 voxels for slack on each side optional double xyz_stats_voxel_size_a=41 [default=10.0]; // size of voxel in A for xyz histogram - optional double xyz_stats_max_box_size_a=42 [default=2000.0]; // maximal size of box for xyz stats (before applying crop factor and adding 5 voxels for slack on each side) + optional double xyz_stats_max_box_size_a=42 [default=1000.0]; // maximal size of box for xyz stats (before applying crop factor and adding 5 voxels for slack on each side) optional FloatRange tunnel_radius_k=36; // (Version 2.5+) if <=0, static radius, otherwise, k force constant for tunnel radius restraint optional FloatRange pore_anchored_beads_k=37; // (Version 2.5+) if <=0, static anchors, otherwise, k force constant for beads anchored to pore optional int32 is_backbone_harmonic=38 [default=0]; // whether backbone is an harmonic or linear potential @@ -273,7 +273,7 @@ message Assignment { optional int32 is_xyz_hist_stats=44 [default=1]; // whether to use an xyz histogram instead of zr histogram (= whether to project x and y to sqrt(x^2+y^2); if so output ot HDF5 file optional double xyz_stats_crop_factor=49 [default=0.5]; // percentage of box to crop from each axis for xyz histogram (symmetrically). optional double xyz_stats_voxel_size_a=50 [default=10.0]; // size of voxel in A for xyz histogram - optional double xyz_stats_max_box_size_a=51 [default=2000.0]; // maximal size of box for xyz stats + optional double xyz_stats_max_box_size_a=51 [default=1000.0]; // maximal size of box for xyz stats optional FloatAssignment tunnel_radius_k=45; // (Version 2.5+) if <=0, static radius, otherwise, k for tunnel radius restraint optional FloatAssignment pore_anchored_beads_k=46; // (Version 2.5+) if <=0, static anchors, otherwise, k force constant for beads anchored to pore optional int32 is_backbone_harmonic=47 [default=1]; // whether backbone is an harmonic or linear potential