diff --git a/docs/src/cli.rst b/docs/src/anchorna.cli.rst
similarity index 100%
rename from docs/src/cli.rst
rename to docs/src/anchorna.cli.rst
diff --git a/docs/src/core.rst b/docs/src/anchorna.core.rst
similarity index 100%
rename from docs/src/core.rst
rename to docs/src/anchorna.core.rst
diff --git a/docs/src/io.rst b/docs/src/anchorna.io.rst
similarity index 100%
rename from docs/src/io.rst
rename to docs/src/anchorna.io.rst
diff --git a/docs/src/util.rst b/docs/src/anchorna.util.rst
similarity index 100%
rename from docs/src/util.rst
rename to docs/src/anchorna.util.rst
diff --git a/docs/src/index.rst b/docs/src/index.rst
index be223a0..e5d7119 100644
--- a/docs/src/index.rst
+++ b/docs/src/index.rst
@@ -4,6 +4,7 @@ API Documentation
 AnchoRNA's functionality is provided through the following modules:
 
 .. autosummary::
+    :no-index:
 
     anchorna.core
     anchorna.util
@@ -14,7 +15,7 @@ AnchoRNA's functionality is provided through the following modules:
     :hidden:
 
     self
-    core
-    util
-    io
-    cli
+    anchorna.core
+    anchorna.util
+    anchorna.io
+    anchorna.cli