Error when trying generator_brute.py

[jychoi-hpc]

Got the following error when tried generator_brute.py in the master branch:

python generator_brute.py --config config-mbp.json
Traceback (most recent call last):
  File "generator_brute.py", line 37, in <module>
    channels = expand_clist(cfg["channel_range"])
NameError: name 'expand_clist' is not defined

Where is expand_clist defined?

[rmchurch]

It should be imported with the “from fluctana import *” call. The brute generator and receiver depend on the rmchurch fluctuana repo, I put it in my pythonpath env variable

[jychoi-hpc]

After adding the following line:

from fluctana.kstarecei import *

I passed the error but got anther one:

Rank: 0 , channel_range:  ['ECEI_L0101-2408'] , id =  0
Traceback (most recent call last):
  File "generator_brute.py", line 56, in <module>
    dobj = KstarEcei(shot=shotnr,data_path=datapath,clist=my_channel_range,verbose=False)
TypeError: __init__() got an unexpected keyword argument 'data_path'

It looks like fluctana/kstarecei.py is outdated. Can you update or point me where I can get the most recent one?

[rmchurch]

Sorry, I should be a little clearer and make a README. Don’t use the fluctana code in the rkube/delta repo. You need to separately git clone the following repo: https://github.com/rmchurch/fluctana Then add the path of that repo to your PYTHONPATH environment variable. When the “from fluctana import *” call is done, it calls “from kstarecei import *” inside, so as long as your PYTHONPATH is setup right, you shouldn’t need “from fluctana.kstarecei import *”.

On Sun, Feb 9, 2020 at 3:44 PM Jong Choi ***@***.***> wrote: After adding the following line: from fluctana.kstarecei import * I passed the error but got anther one: Rank: 0 , channel_range: ['ECEI_L0101-2408'] , id = 0 Traceback (most recent call last): File "generator_brute.py", line 56, in <module> dobj = KstarEcei(shot=shotnr,data_path=datapath,clist=my_channel_range,verbose=False) TypeError: __init__() got an unexpected keyword argument 'data_path' It looks like fluctana/kstarecei.py is outdated. Can you update or point me where I can get the most recent one? — You are receiving this because you were assigned. Reply to this email directly, view it on GitHub <#16?email_source=notifications&email_token=AAMBBFDG5BDCHFCIT7VCI63RCBTL3A5CNFSM4KR5QUNKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOELGXRBA#issuecomment-583891076>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAMBBFBN7PPSD3ZEPMMZIW3RCBTL3ANCNFSM4KR5QUNA> .

-- R. Michael Churchill

[rkube]

I'll remove the fluctana code from this repo soon to avoid this confusion.

[jychoi-hpc]

Sorry. I didn't read that part. After checking out and exporting, it works now. I will try together with receiver_brute.py and post any question/issue.

[jychoi-hpc]

I got an error when running receiver_brute.py. It looks like there is no reader.get_attrs function. Do you have your implementation? I can make one but just want to avoid any conflict.

[rmchurch]

Ah, you're right. No, it looks like I left out that part. I'll get working on it, but you're welcome to fix also, should be quick.

…

On Mon, Feb 10, 2020 at 2:11 PM Jong Choi ***@***.***> wrote: I got an error when running receiver_brute.py. It looks like there is no reader.get_attrs function. Do you have your implementation? I can make one but just want to avoid any conflict. — You are receiving this because you were assigned. Reply to this email directly, view it on GitHub <#16?email_source=notifications&email_token=AAMBBFEIFTSWADYV5DC3ETLRCGREJA5CNFSM4KR5QUNKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOELJ3R7Y#issuecomment-584300799>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAMBBFAHGPC4SQT7CSYXWCDRCGREJANCNFSM4KR5QUNA> .