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Cm12_R.html
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<!DOCTYPE html>
<html lang="en">
<head>
<title>Cm12_R - Optic Lobe Connectome</title>
<link rel="stylesheet" href="styles/chota.min.css">
<meta name="viewport" content="width=device-width, initial-scale=1">
<style>
/* Center the main content and add maximum width */
body > .container {
max-width: 1400px; /* or any other max-width you prefer */
margin-left: auto;
margin-right: auto;
padding-left: 1rem; /* This adds some padding within the container */
padding-right: 1rem; /* This adds some padding within the container */
}
body {
font-family: Arial, sans-serif;
}
.gallery_video, .threeD_view {
position: relative;
width: 100%;
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padding-bottom: 56.25%;
overflow: hidden; /* Add this line to prevent iframe overflow issues */
}
.gallery_video iframe, .threeD_view iframe {
position: absolute;
top: 0;
left: 0;
width: 100%;
height: 100%;
}
.counter{
font-size:80%;
}
col.is-center .header_1 {
margin-bottom: 0px !important;
}
.main-group-nt-pred{
font-weight: 500;
font-size: 1.2em;
padding: 0;
margin-top: 0;
margin-bottom: 10px;
}
.pad-left{
padding-left: 20px;
}
/* Apply a border under the entire header row */
.row thead tr {
border-bottom: 2px solid #000; /* Adjust color as needed */
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/* Ensure no border under td elements and the first th in the body rows */
.row tbody th, .row tbody td {
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/* Apply standard padding to all cells and row headers in the <tbody> */
.layer-stats-table tbody th,
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.card p {
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.ame-stats tbody th, .cb-stats tbody th, .me-stats tbody th {
color: transparent;
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text-align:center;
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padding-left: 10px;
text-align:left;
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.connectivity-table tr th, .connectivity-table td {
padding-left: 0px; /* Adjust the left padding to create space on the left side of each cell */
padding-right: 20px; /* Adjust the right padding to create space on the right side of each cell */
}
/* Remove or reduce padding for the first th and td of each row */
.connectivity-table tr th:first-child, .connectivity-table td:first-child {
padding-left: 0px; /* Less padding on the left side for the first column */
padding-right: 10px; /* You can also adjust this if needed */
}
.nav-right a:link {
color: #007bff; /* Blue color for links */
text-decoration: none; /* Optional: removes underline from links */
}
.nav-right a:visited {
color: #0056b3; /* Darker blue color for visited links */
}
.nav-right a:hover {
color: #0056b3; /* Darker blue color on hover */
text-decoration: underline; /* Optional: adds underline on hover */
}
.nav-right a:active {
color: #004299; /* Even darker blue color when the link is clicked */
}
.connectivity-link:hover {
color: green; /* Lighter or different color on hover */
text-decoration: underline; /* Optional: adds underline on hover */
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.non-functional-link {
color: grey; /* Non-functional link color */
cursor: default;
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@media (max-width: 1400px) {
.connectivity-table {
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.connectivity-table td, .connectivity-table th {
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}
@media (max-width: 1000px) {
.connectivity-table {
font-size: 50%; /* Slightly smaller font size */
width: 100%;
}
/* Reduce padding for cells to save space */
.connectivity-table td, .connectivity-table th {
padding: 2px;
}
}
@media (max-width: 800px) {
.connectivity-table {
font-size: 20%; /* Slightly smaller font size */
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.connectivity-table {
font-size: 10%; /* Even smaller font size */
width: 100%;
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.connectivity-table td, .connectivity-table th {
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.row > [class^="col-"] {
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/* Minimal padding */
.connectivity-table td, .connectivity-table th {
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/* Adjust or hide more columns as needed */
.connectivity-table .more-columns {
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}
}
a.txt_OL_intrinsic, span.txt_OL_intrinsic{color:#029e73}
a.txt_OL_connecting, span.txt_OL_connecting{color:#D55E00}
a.txt_VPN, span.txt_VPN{color:#0173b2}
a.txt_VCN, span.txt_VCN{color:#de8f05}
a.txt_other, span.txt_other{color:#cc78bc}
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.connectivity-table table td{padding-top:.3rem; padding-bottom:.1rem;}
.connectivity-table table th{vertical-align:bottom;}
.connectivity-table table tr:nth-child(2n) td {
background-color: #f8f8f8;
}
.connectivity-table .col2, .connectivity-table .col3, .connectivity-table .col4, .connectivity-table .col5{text-align:right;}
.hover_group:hover {
opacity: 1;
}
</style>
</head>
<body>
<div class="container">
<nav class="nav">
<div class="nav-right">
<a href="index.html">Home</a>
<a href="cell_types.html">Cell Types</a>
<a href="webpages_glossary.html">Glossary</a>
<a href="https://www.youtube.com/@ReiserLab">YouTube</a>
<a href="https://neuprint.janelia.org/?dataset=optic-lobe:v1.0">neuPrint</a>
</div>
</nav>
<header class="row">
<div class="col is-center">
<h1> <a href="https://neuprint.janelia.org/results?dataset=optic-lobe:v1.0&qt=findneurons&qr[0][code]=fn&qr[0][ds]=optic-lobe:v1.0&qr[0][pm][dataset]=optic-lobe:v1.0&qr[0][pm][all_segments]=false&qr[0][pm][enable_contains]=true&qr[0][visProps][rowsPerPage]=50&tab=0&qr[0][pm][neuron_name]=Cm12" class="txt_OL_intrinsic">Cm12 <span class="txt_hemisphere" title="Cell body in right hemisphere">(R)</span></a>, <span class="counter">n=35 cell(s)</span></h1>
</div>
</header>
<div class="row">
<div class="col is-center">
<div class="main-group-nt-pred">
Main group: <span class="txt_OL_intrinsic">Optic Lobe Intrinsic Neurons</span>;
Neurotransmitter consensus prediction: GABA
</div>
</div>
</div>
<div class="row">
<div class="col">
<h2 class="pad-left">Mean synapse counts per layer</h2>
</div>
</div>
<div class="row">
<div class="col-2 text-center pad-left layer-stats-table"><style type="text/css">
#T_f92f8 th {
text-align: center;
background-color: rgba(142, 189, 120, 0.3);
}
#T_f92f8 td {
text-align: center;
background-color: rgba(142, 189, 120, 0.3);
}
</style>
<table id="T_f92f8">
<thead>
<tr>
<th class="blank level0" > </th>
<th id="T_f92f8_level0_col0" class="col_heading level0 col0" >LA</th>
</tr>
</thead>
<tbody>
<tr>
<th id="T_f92f8_level0_row0" class="row_heading level0 row0" >Post</th>
<td id="T_f92f8_row0_col0" class="data row0 col0" >-</td>
</tr>
<tr>
<th id="T_f92f8_level0_row1" class="row_heading level0 row1" >Pre</th>
<td id="T_f92f8_row1_col0" class="data row1 col0" >-</td>
</tr>
</tbody>
</table>
</div>
<div class="col-8 me-stats text-center layer-stats-table"><style type="text/css">
#T_c21ef th {
text-align: center;
background-color: rgba(94, 24, 77, 0.3);
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#T_c21ef td {
text-align: center;
background-color: rgba(94, 24, 77, 0.3);
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</style>
<table id="T_c21ef">
<thead>
<tr>
<th class="blank level0" > </th>
<th id="T_c21ef_level0_col0" class="col_heading level0 col0" >M1</th>
<th id="T_c21ef_level0_col1" class="col_heading level0 col1" >M2</th>
<th id="T_c21ef_level0_col2" class="col_heading level0 col2" >M3</th>
<th id="T_c21ef_level0_col3" class="col_heading level0 col3" >M4</th>
<th id="T_c21ef_level0_col4" class="col_heading level0 col4" >M5</th>
<th id="T_c21ef_level0_col5" class="col_heading level0 col5" >M6</th>
<th id="T_c21ef_level0_col6" class="col_heading level0 col6" >M7</th>
<th id="T_c21ef_level0_col7" class="col_heading level0 col7" >M8</th>
<th id="T_c21ef_level0_col8" class="col_heading level0 col8" >M9</th>
<th id="T_c21ef_level0_col9" class="col_heading level0 col9" >M10</th>
<th id="T_c21ef_level0_col10" class="col_heading level0 col10" >Total</th>
</tr>
</thead>
<tbody>
<tr>
<th id="T_c21ef_level0_row0" class="row_heading level0 row0" >0</th>
<td id="T_c21ef_row0_col0" class="data row0 col0" >-</td>
<td id="T_c21ef_row0_col1" class="data row0 col1" >0.1</td>
<td id="T_c21ef_row0_col2" class="data row0 col2" >0.9</td>
<td id="T_c21ef_row0_col3" class="data row0 col3" >0.4</td>
<td id="T_c21ef_row0_col4" class="data row0 col4" >0.6</td>
<td id="T_c21ef_row0_col5" class="data row0 col5" >259.7</td>
<td id="T_c21ef_row0_col6" class="data row0 col6" >174.3</td>
<td id="T_c21ef_row0_col7" class="data row0 col7" >1.0</td>
<td id="T_c21ef_row0_col8" class="data row0 col8" >-</td>
<td id="T_c21ef_row0_col9" class="data row0 col9" >-</td>
<td id="T_c21ef_row0_col10" class="data row0 col10" >436.9</td>
</tr>
<tr>
<th id="T_c21ef_level0_row1" class="row_heading level0 row1" >1</th>
<td id="T_c21ef_row1_col0" class="data row1 col0" >-</td>
<td id="T_c21ef_row1_col1" class="data row1 col1" >-</td>
<td id="T_c21ef_row1_col2" class="data row1 col2" >0.0</td>
<td id="T_c21ef_row1_col3" class="data row1 col3" >0.0</td>
<td id="T_c21ef_row1_col4" class="data row1 col4" >-</td>
<td id="T_c21ef_row1_col5" class="data row1 col5" >97.0</td>
<td id="T_c21ef_row1_col6" class="data row1 col6" >50.7</td>
<td id="T_c21ef_row1_col7" class="data row1 col7" >-</td>
<td id="T_c21ef_row1_col8" class="data row1 col8" >-</td>
<td id="T_c21ef_row1_col9" class="data row1 col9" >-</td>
<td id="T_c21ef_row1_col10" class="data row1 col10" >147.8</td>
</tr>
</tbody>
</table>
</div>
</div>
<div class="row">
<div class="col-8 text-center pad-left layer-stats-table"><style type="text/css">
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<table id="T_1847c">
<thead>
<tr>
<th class="blank level0" > </th>
<th id="T_1847c_level0_col0" class="col_heading level0 col0" >LO1</th>
<th id="T_1847c_level0_col1" class="col_heading level0 col1" >LO2</th>
<th id="T_1847c_level0_col2" class="col_heading level0 col2" >LO3</th>
<th id="T_1847c_level0_col3" class="col_heading level0 col3" >LO4</th>
<th id="T_1847c_level0_col4" class="col_heading level0 col4" >LO5a</th>
<th id="T_1847c_level0_col5" class="col_heading level0 col5" >LO5b</th>
<th id="T_1847c_level0_col6" class="col_heading level0 col6" >LO6</th>
<th id="T_1847c_level0_col7" class="col_heading level0 col7" >Total</th>
</tr>
</thead>
<tbody>
<tr>
<th id="T_1847c_level0_row0" class="row_heading level0 row0" >Post</th>
<td id="T_1847c_row0_col0" class="data row0 col0" >-</td>
<td id="T_1847c_row0_col1" class="data row0 col1" >-</td>
<td id="T_1847c_row0_col2" class="data row0 col2" >-</td>
<td id="T_1847c_row0_col3" class="data row0 col3" >-</td>
<td id="T_1847c_row0_col4" class="data row0 col4" >-</td>
<td id="T_1847c_row0_col5" class="data row0 col5" >-</td>
<td id="T_1847c_row0_col6" class="data row0 col6" >-</td>
<td id="T_1847c_row0_col7" class="data row0 col7" >-</td>
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<tr>
<th id="T_1847c_level0_row1" class="row_heading level0 row1" >Pre</th>
<td id="T_1847c_row1_col0" class="data row1 col0" >-</td>
<td id="T_1847c_row1_col1" class="data row1 col1" >-</td>
<td id="T_1847c_row1_col2" class="data row1 col2" >-</td>
<td id="T_1847c_row1_col3" class="data row1 col3" >-</td>
<td id="T_1847c_row1_col4" class="data row1 col4" >-</td>
<td id="T_1847c_row1_col5" class="data row1 col5" >-</td>
<td id="T_1847c_row1_col6" class="data row1 col6" >-</td>
<td id="T_1847c_row1_col7" class="data row1 col7" >-</td>
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<th class="blank level0" > </th>
<th id="T_e630a_level0_col0" class="col_heading level0 col0" >AME</th>
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</thead>
<tbody>
<tr>
<th id="T_e630a_level0_row0" class="row_heading level0 row0" >0</th>
<td id="T_e630a_row0_col0" class="data row0 col0" >-</td>
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<tr>
<th id="T_e630a_level0_row1" class="row_heading level0 row1" >1</th>
<td id="T_e630a_row1_col0" class="data row1 col0" >-</td>
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</tbody>
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</div>
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<div class="row">
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<thead>
<tr>
<th class="blank level0" > </th>
<th id="T_91275_level0_col0" class="col_heading level0 col0" >LOP1</th>
<th id="T_91275_level0_col1" class="col_heading level0 col1" >LOP2</th>
<th id="T_91275_level0_col2" class="col_heading level0 col2" >LOP3</th>
<th id="T_91275_level0_col3" class="col_heading level0 col3" >LOP4</th>
<th id="T_91275_level0_col4" class="col_heading level0 col4" >Total</th>
</tr>
</thead>
<tbody>
<tr>
<th id="T_91275_level0_row0" class="row_heading level0 row0" >Post</th>
<td id="T_91275_row0_col0" class="data row0 col0" >-</td>
<td id="T_91275_row0_col1" class="data row0 col1" >-</td>
<td id="T_91275_row0_col2" class="data row0 col2" >-</td>
<td id="T_91275_row0_col3" class="data row0 col3" >-</td>
<td id="T_91275_row0_col4" class="data row0 col4" >-</td>
</tr>
<tr>
<th id="T_91275_level0_row1" class="row_heading level0 row1" >Pre</th>
<td id="T_91275_row1_col0" class="data row1 col0" >-</td>
<td id="T_91275_row1_col1" class="data row1 col1" >-</td>
<td id="T_91275_row1_col2" class="data row1 col2" >-</td>
<td id="T_91275_row1_col3" class="data row1 col3" >-</td>
<td id="T_91275_row1_col4" class="data row1 col4" >-</td>
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</tbody>
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<table id="T_22b21">
<thead>
<tr>
<th class="blank level0" > </th>
<th id="T_22b21_level0_col0" class="col_heading level0 col0" >central brain</th>
</tr>
</thead>
<tbody>
<tr>
<th id="T_22b21_level0_row0" class="row_heading level0 row0" >0</th>
<td id="T_22b21_row0_col0" class="data row0 col0" >-</td>
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<tr>
<th id="T_22b21_level0_row1" class="row_heading level0 row1" >1</th>
<td id="T_22b21_row1_col0" class="data row1 col0" >-</td>
</tr>
</tbody>
</table>
</div>
</div>
<div class="row">
<div class="col">
<h2 class="pad-left">Neuron visualizations</h2>
</div>
</div>
<div class="row">
<div class="col">
<div class="threeD_view">
<iframe scrolling="no" frameborder="0" src="img/dynamic/Cm12_R.html"></iframe>
</div>
</div>
<div class="col">
<div class="gallery_video">
<iframe frameborder="0" style="margin-left:0px; padding:0px;border:0px solid white;" allowfullscreen src="https://www.youtube.com/embed/f-EyegjkPzY?autoplay=1&rel=0&color=white"></iframe>
</div>
</div>
</div>
<div class="row">
<div class="col">
<h2 id="CoverageHeader">Population spatial coverage</h2>
</div>
</div>
<div class="row">
<div class="col">
<div class="card">
<header><h4 style="color: #5E184D;"><a href="scatterplots/scatterplots-ME.html">Medulla</a></h4></header>
<p>Number of post synapses: 15293</p>
<p>Number of pre synapses: 5172</p>
<p>Number of output connections: 19230</p>
<p>Coverage factor: 3.9</p>
<p>Columnar completeness: 0.95</p>
<p>Area completeness: 0.97</p>
<p>Cell size (columns): 86</p>
</div>
</div>
<div class="col">
<div class="card">
<header><h4 style="color: #BB4A5F;"><a href="scatterplots/scatterplots-LO.html">Lobula</a></h4></header>
<p>Number of post synapses: 0</p>
<p>Number of pre synapses: 0</p>
<p>Number of output connections: 0</p>
<p>Coverage factor: 0</p>
<p>Columnar completeness: 0</p>
<p>Area completeness: 0</p>
<p>Cell size (columns): 0</p>
</div>
</div>
<div class="col">
<div class="card">
<header><h4 style="color: #F16E65;"><a href="scatterplots/scatterplots-LOP.html">Lobula Plate</a></h4></header>
<p>Number of post synapses: 0</p>
<p>Number of pre synapses: 0</p>
<p>Number of output connections: 0</p>
<p>Coverage factor: 0</p>
<p>Columnar completeness: 0</p>
<p>Area completeness: 0</p>
<p>Cell size (columns): 0</p>
</div>
</div>
</div>
<div class="row">
<div class="col">
<figure>
<svg version="1.1" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink" viewBox="0 0 2934 793" preserveAspectRatio="xMinYMin meet">
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<div class="row">
<div class="col">
<figure>
<svg version="1.1" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink" viewBox="0 0 2934 793" preserveAspectRatio="xMinYMin meet">
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<div class="row">
<div class="col">
<h2 id="OL-Connectivity-Header">Optic Lobe Connectivity</h2>
<div class="row">
<div class="col-5 connectivity-table">
<h3>Inputs</h4>
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<th class="blank level0" > </th>
<th id="T_365af_level0_col0" class="col_heading level0 col0" >instance</th>
<th id="T_365af_level0_col1" class="col_heading level0 col1" >NT</th>
<th id="T_365af_level0_col2" class="col_heading level0 col2" >total connections</th>
<th id="T_365af_level0_col3" class="col_heading level0 col3" >connections /#Cm12 <span class="txt_hemisphere" title="Cell body in right hemisphere">(R)</span></th>
<th id="T_365af_level0_col4" class="col_heading level0 col4" >%</th>
<th id="T_365af_level0_col5" class="col_heading level0 col5" >% cumu.</th>
</tr>
</thead>
<tbody>
<tr>
<th id="T_365af_level0_row0" class="row_heading level0 row0" >0</th>
<td id="T_365af_row0_col0" class="data row0 col0" ><a href="MeTu1_R.html" class="connectivity-link txt_VPN">MeTu1 <span class="txt_hemisphere" title="Cell body in right hemisphere">(R)</span></a></td>
<td id="T_365af_row0_col1" class="data row0 col1" >ACh</td>
<td id="T_365af_row0_col2" class="data row0 col2" >3,261</td>
<td id="T_365af_row0_col3" class="data row0 col3" >93.2</td>
<td id="T_365af_row0_col4" class="data row0 col4" >21.5%</td>
<td id="T_365af_row0_col5" class="data row0 col5" >21.5%</td>
</tr>