You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
I have three filter conditions on the anchor results file (all have min effect size 0.9; then the min number of nonzero samples is 250, 50 or 20), with which I made 3 different anchor.txt files for satc dump.
FilterSet_1: 7,201 anchors
FilterSet_2: 263,556 anchors
FilterSet_3: 1,076,797 anchors
The satc_dump outputs for FilterSet_3 are missing many anchors (e.g., the anchors file has 65 anchors mapping to a particular gene, and only one of those 65 appears in the satc_dump output). The number of lines in the output files also doesn't scale as expected with the number of anchors and are as follows:
FilterSet_1: 87,078 lines in satc_dump output
FilterSet_2: 362,678 lines in satc_dump output
FilterSet_3: 597,094 lines in satc_dump output
The text was updated successfully, but these errors were encountered:
I have three filter conditions on the anchor results file (all have min effect size 0.9; then the min number of nonzero samples is 250, 50 or 20), with which I made 3 different anchor.txt files for satc dump.
FilterSet_1: 7,201 anchors
FilterSet_2: 263,556 anchors
FilterSet_3: 1,076,797 anchors
The satc_dump outputs for FilterSet_3 are missing many anchors (e.g., the anchors file has 65 anchors mapping to a particular gene, and only one of those 65 appears in the satc_dump output). The number of lines in the output files also doesn't scale as expected with the number of anchors and are as follows:
FilterSet_1: 87,078 lines in satc_dump output
FilterSet_2: 362,678 lines in satc_dump output
FilterSet_3: 597,094 lines in satc_dump output
The text was updated successfully, but these errors were encountered: