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hima_genomes.csv
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"Microorganism or Project" "Project ID" "RefSeq ID" "Taxonomy ID" "Domain" "Taxonomic Group" "NCBI_Habitat" "NCBI Temperature range" "NCBI_Optimal temperature" "NCBI_Salinity" "NCBI_Oxygen Requirement" "NCBI_Motility" "NCBI_Shape" "NCBI_Arrangement" "NCBI_Endospores" "NCBI_Gram Stain" "NCBI_Pathogenic in" "NCBI_Disease" "Sequence Status" "Sequence Availability" "Released date" "Modified date" "Chromosomes" "Plasmids" "Contigs" "Proteins on contigs" "Genome Size" "GC Content" "Sequencing Centers" "Sequencing Center URLs" "Genbank accessions" "RefSeq accessions" "Publications" "Tmin" "Topt" "Tmax" "environment" "depth" "location" "latitude" "longitude" "taxon-linked publications"
"Aeromonas salmonicida subsp. salmonicida A449" 16723 58631 382245 "Bacteria" "Gammaproteobacteria" "Aquatic" "Mesophilic" "Facultative" "Yes" "Rod" "Negative" "Fish" "Furunculosis" "complete" "04/06/2007" "07/26/2011 17:04:27" 1 5 5.0462 58.2 "National Research Council Canada - Institute of Marine Biosciences" "CP000644,AY301063,AY301064,AY301065,CP000645,CP000646" "NC_009348,NC_004923,NC_004925,NC_004924,NC_009349,NC_009350" 12932739 "fish pathogen (brown trout)" "8917089, 12867441, 12932739, 15048988, 16735747, 18212071, 18801193 "
"Aliivibrio salmonicida LFI1238" 30703 59251 316275 "Bacteria" "Gammaproteobacteria" "Aquatic" "Psychrophilic" "Facultative" "Yes" "Rod" "No" "Negative" "Fish" "Hitra disease" "complete" "10/01/2008" "06/25/2011 22:49:40" 2 4 4.64987 39 "The Pathogen Sequencing Unit, The Wellcome Trust Sanger Institute|University of TromsM-oM-?M-=" "FM178379,FM178380,FM178382,FM178383,FM178384,FM178381" "NC_011312,NC_011313,NC_011314,NC_011315,NC_011316,NC_011311" 19099551 "fish pathogen (Atlantic cod)" "Hammerfest, Norway" "16609813, 17222185, 18391403, 19099551, 19193992 "
"Cenarchaeum symbiosum A" 202 61411 414004 "Archaea" "Crenarchaeota" "Specialized" "NC_014820" 8 18 "marine sponge (Axinella mexicana)" "coast of Santa Barbara, California" "16533068, 17114289"
"Cenarchaeum symbiosum B" 16291 41991 414005 "Archaea" "Crenarchaeota" "Specialized" "NS_000190" 8 18 "marine sponge (Axinella mexicana)" "coast of Santa Barbara, California" 17114289
"Colwellia psychrerythraea 34H" 275 57855 167879 "Bacteria" "Gammaproteobacteria" "Specialized" "Psychrophilic" 8 "Facultative" "Yes" "Rod" "Singles" "Negative" "No" "complete" "07/26/2005" "02/03/2011 17:18:00" 1 5.37318 38 "TIGR" "CP000083" "NC_003910" 16043709 -10 10 19 "marine sediments" "Arctic" "1295895, 8226630, 11743207, 12177352, 12898133, 15085417, 15184127, 16043709, 16362517, 17537732, 20383017 "
"Colwellia SLW05" 74001 "Bacteria" "Gammaproteobacteria" "Specialized" "sea ice melt pond" "Antarctica"
"Colwellia sp. MT41" 29235 58049 "Bacteria" "Gammaproteobacteria" "Specialized" "Psychrophilic" "Facultative" "Yes" "Rod" "No" "No" "unfinished" "no sequence" "J. Craig Venter Institute" "http://www.venterinstitute.org/" "deep sea crustacean" 10476 "Marianas Trench" " "
"Desulfotalea psychrophila LSv54" 12751 58153 177439 "Bacteria" "Deltaproteobacteria" "Specialized" "Psychrophilic" 7 "Anaerobic" "Rod" "Negative" "No" "complete" "08/13/2004" "10/22/2010 11:40:33" 1 2 3.65963 46.6 "e.gene Biotechnologie GmbH" "CR522870,CR522871,CR522872" "NC_006138,NC_006139,NC_006140" 15305914 "marine sediments" "Svalbard" "10473404, 10555345, 15305914, 17632124"
"Exiguobacterium sibiricum 255-15" 10649 58053 262543 "Bacteria" "Firmicutes" "Specialized" "Psychrophilic" "Facultative" "Rod" "Singles, Pairs, Chains" "No" "Positive" "complete" "04/03/2008" "10/22/2010 11:23:54" 1 2 3.04084 47.7 "DOE Joint Genome Institute" "CP001022,CP001024,CP001023" "NC_010556,NC_010550,NC_010549" "16489412,19019206" -5 39 "permafrost (2-3 Ma)" "Siberia" "16489412, 19019206, 19913036, 20944217"
"Flavobacterium psychrophilum JIP02/86" 19979 61627 402612 "Bacteria" "Bacteroidetes/Chlorobi" "Aquatic" "Psychrophilic" "Aerobic" "Yes" "Rod" "No" "Negative" "Salmonid fish" "Cold water disease, rainbow trout fry syndrome" "complete" "06/25/2007" "05/12/2011 16:04:08" 1 2.86199 32.5 "Institut National de la Recherche Agronomique (INRA)" "AM398681" "NC_009613" 17592475 "fish pathogen (salmonid)" "Clear Springs, Idaho" "16820479, 17592475, 17953557 "
"Fragilariopsis cylindrus" 32761 186039 "Eukarya" "Bacillariophyta" "Aquatic" "Psychrophilic" "Aerobic" "sea ice" " "
"Gillisia limnaea DSM 15749" 50579 865937 "Bacteria" "Bacteroidetes/Chlorobi" "Aquatic" "Psychrophilic" 20 "Moderate halophilic" "Aerobic" "Yes" "Rod" "Negative" "unfinished" "no sequence" 3.9 "JGI" 5 20 25 "freshwater microbial mat" "Lake Fryxell, Antarctica" "12583721, 15023957"
"Glaciecola sp. HTCC2999" 20121 54867 455436 "Bacteria" "Gammaproteobacteria" "Multiple" "Psychrophilic" "Moderate halophilic" "Aerobic" "Yes" "Rod" "No" "Negative" "assembly" "wgs assembly" "07/18/08" 56 2242 2.52304 40.7 "J. Craig Venter Institute" "http://www.venterinstitute.org/" "ABST00000000" "NZ_ABST00000000" " "
"Halorubrum lacusprofundi ATCC 49239" 18455 58807 416348 "Archaea" "Euryarchaeota" "Aquatic" "Mesophilic" "Extreme halophilic" "Aerobic" "Yes" "Rod" "No" "complete" "02/04/2009" "09/30/2011 12:06:52" 2 1 3.6953 64 "DOE Joint Genome Institute" "CP001365,CP001366,CP001367" "NC_012029,NC_012028,NC_012030" "meromictic lake" "Deep Lake, Antarctica" "9226918, 19946058"
"Hymenobacter roseosalivarius DSM 11622" 38115 645990 "Bacteria" "Bacteroidetes/Chlorobi" "Terrestrial" "Psychrophilic" "Aerobic" "Negative" "unfinished" "no sequence" 5 "DOE Joint Genome Institute" "http://www.jgi.doe.gov/" "soil" "Dry Valleys, Antarctica" 9841127
"Idiomarina loihiensis L2TR" 10790 58087 283942 "Bacteria" "Gammaproteobacteria" "Specialized" "Mesophilic" "4-46" "Aerobic" "Yes" "Rod" "Negative" "complete" "12/02/2004" "09/15/2011 16:37:38" 1 2.83932 47 "University of Hawaii" "AE017340" "NC_006512" 15596722 4 46 "deep seawater" "Lo'ihi Seamount southeast of Hawaii (1300 m)" 15596722
"Lentisphaera araneosa HTCC2155" 13437 54167 313628 "Bacteria" "Chlamydiae/Verrucomicrobia group" "Aquatic" "No" "Sphere" "Singles" "No" "Negative" "No" "None" "assembly" "wgs assembly" "06/19/07" 81 5104 6.02318 41 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?SpeciesTag=LNTAR&SINGLE_ORG_PAGE_ATTR=SINGLE_ORG_PAGE_MAIN" "ABCK00000000" "NZ_ABCK00000000" 4 16 25 "coastal seawater" "Oregon coast" 20363947
"marine actinobacterium PHSC20C1" 13373 54153 312284 "Bacteria" "Actinobacteria" "Aquatic" "Mesophilic" 20 "Rod" "Singles, Pairs, Chains" "No" "Positive" "No" "None" "assembly" "wgs assembly" "02/24/06" 23 2668 2.76901 59.1 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?SpeciesTag=A20C1&SINGLE_ORG_PAGE_ATTR=SINGLE_ORG_PAGE_MAIN" "AAOB00000000" "NZ_AAOB00000000" "coastal seawater" "Western Antarctic Peninsula" " "
"marine gamma proteobacterium HTCC2080" 18487 54583 247639 "Bacteria" "Gammaproteobacteria" "Aquatic" "assembly" "wgs assembly" "12/15/06" 25 3185 3.57608 51.8 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?speciesTag=MGP2080&pageAttr=pageMain" "AAVV00000000" "NZ_AAVV00000000" 4 16 30 "coastal seawater" "Oregon coast" "14711672, 17504483, 20472793 "
"marine gamma proteobacterium HTCC2143" 13605 54265 247633 "Bacteria" "Gammaproteobacteria" "Aquatic" "No" "None" "assembly" "wgs assembly" "12/15/06" 30 3662 3.92563 47.2 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?SpeciesTag=MG2143&SINGLE_ORG_PAGE_ATTR=SINGLE_ORG_PAGE_MAIN" "AAVT00000000" "NZ_AAVT00000000" "<4" 16 20 "coastal seawater" "coast of Newport, Oregon" "14711672, 20601481"
"marine gamma proteobacterium HTCC2148" 30725 55363 247634 "Bacteria" "Gammaproteobacteria" "Aquatic" "Mesophilic" "assembly" "wgs assembly" "10/01/08" 75 3827 4.31022 52.9 "J. Craig Venter Institute" "https://moore.jcvi.org/moore/SingleOrganism.do?speciesTag=GPB2148&pageAttr=pageMain" "ABXQ00000000" "NZ_ABXQ00000000" 4 16 30 "coastal seawater" "Oregon coast" "14711672, 17504483, 20472793 "
"Marinobacter algicola DG893" 19321 54691 443152 "Bacteria" "Gammaproteobacteria" "Host-associated" "Mesophilic" "25-30" "Facultative" "Yes" "Rod" "Singles, Pairs, Short chains" "No" "Negative" "assembly" "wgs assembly" "06/21/07" 104 4127 4.4 57 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?speciesTag=MDG893&pageAttr=pageMain" "ABCP00000000" "NZ_ABCP00000000" 5 25 40 "epiphyte (Gymnodinium catenatum)" " "
"Marinobacter sp. ELB17" 18955 54619 270374 "Bacteria" "Gammaproteobacteria" "Aquatic" "Psychrophilic" "12-15" "Facultative" "Rod" "Negative" "No" "assembly" "wgs assembly" "03/06/07" 75 4850 4.9 54.3 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?speciesTag=MELB17&pageAttr=pageMain" "AAXY00000000" "NZ_AAXY00000000" "meromictic lake" "East Lobe Lake Bonney, Antarctica" " "
"Methanococcoides burtonii DSM 6242" 9634 58023 259564 "Archaea" "Euryarchaeota" "Aquatic" "Mesophilic" 23.4 "Moderate halophilic" "Anaerobic" "Yes" "Irregular coccus" "No" "No" "complete" "04/10/2006" "10/22/2010 11:20:14" 1 2.57503 40.8 "DOE Joint Genome Institute" "CP000300" "NC_007955" -2.5 29 "meromictic lake" "Ace Lake, Antarctica" "9845338, 10731411, 12805271, 18951410, 19404327, 19837658, 21477108 "
"Methanogenium frigidum Ace-2" 13497 313587 "Archaea" "Euryarchaeota" "Aquatic" "Psychrophilic" 15 "No" "Coccus" "Singles" "No" "None" "unfinished" "no sequence" 5 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?SpeciesTag=MFACE2&SINGLE_ORG_PAGE_ATTR=SINGLE_ORG_PAGE_MAIN" 0 15 18 "meromictic lake" "Ace Lake, Antarctica" "12805271, 16957257"
"Nitrosococcus oceani ATCC 19707" 13993 58403 323261 "Bacteria" "Gammaproteobacteria" "Aquatic" "Yes" "Sphere, Ellipse" "Singles, Pairs" "complete" "10/04/2005" "10/22/2010 12:12:09" 1 1 3.54 50.3 "DOE Joint Genome Institute" "CP000127,CP000126" "NC_007484,NC_007483" 16957257 30 "marine sediments" "clones from Bonney Lake, Antarctic" "10547440, 11807563, 15066830, 16957257"
"Octadecabacter antarcticus 238" 19331 54699 391616 "Bacteria" "Alphaproteobacteria" "Aquatic" "Psychrophilic" "No" "None" "assembly" "wgs assembly" "07/15/08" 80 5834 5.36882 55.2 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?speciesTag=OA238&pageAttr=pageMain" "ABSK00000000" "NZ_ABSK00000000" "coastal seawater" "Beaufort Sea, Alaska" "73° 01 N, 148° 31 W" " "
"Octadecabacter antarcticus 307" 19333 54701 391626 "Bacteria" "Alphaproteobacteria" "Aquatic" "Psychrophilic" "No" "None" "assembly" "wgs assembly" "07/15/08" 58 5495 4.892 54.6 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?speciesTag=OA307&pageAttr=pageMain" "ABSH00000000" "NZ_ABSH00000000" "coastal seawater" "McMurdo Sound, Antarctica" 7574660
"Oleispira antarctica RB-8" 188908 "Bacteria" "Gammaproteobacteria" "Aquatic" "Psychrophilic" "coastal seawater" "Rod Bay, Ross Sea, Antarctica"
"Photobacterium profundum 3TCK" 13563 54231 314280 "Bacteria" "Gammaproteobacteria" "Multiple" "Psychrophilic" 15 "Non-halophilic" "Facultative" "Yes" "Rod" "Singles" "Negative" "assembly" "wgs assembly" "03/23/06" 82 5549 6.10761 41.3 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?SpeciesTag=P3TCK&SINGLE_ORG_PAGE_ATTR=SINGLE_ORG_PAGE_MAIN" "AAPH00000000" "NZ_AAPH00000000" "coastal seawater" "San Diego Bay, California" " "
"Photobacterium profundum SS9" 13128 62923 298386 "Bacteria" "Gammaproteobacteria" "Multiple" "Psychrophilic" 15 "Non-halophilic" "Facultative" "Yes" "Rod" "Singles" "Negative" "No" "complete" "04/30/2004" "02/14/2011 17:24:06" 2 1 6.41794 41.7 "University of Padova, Italy" "CR354531,CR354532,CR377818" "NC_006370,NC_006371,NC_005871" 15746425 0 25 "deep seawater, amphipod" "Sulu Trough (2551 m)" 15746425
"Polaribacter filamentus" 13335 53483 "Bacteria" "Bacteroidetes/Chlorobi" "Aquatic" "Psychrophilic" "Aerobic" "No" "Rod" "Negative" "No" "unfinished" "no sequence" 32 "Integrated Genomics" "http://www.integratedgenomics.com/genomereleases.html" "coastal seawater" "Beaufort Sea, Alaska" "73° 01 N, 148° 31 W" "2479840, 8385320, 8396546, 8759872, 8801425, 9003456, 9442062, 9503608, 9535087, 9676237, 10197992, 10671446, 11160100, 11209061, 12055309, 15034641, 15689115, 15746425, 15774685, 20040594, 21098515 "
"Polaribacter irgensii 23-P" 13451 54179 313594 "Bacteria" "Bacteroidetes/Chlorobi" "Aquatic" "Psychrophilic" "Aerobic" "Yes" "Rod" "Negative" "No" "assembly" "wgs assembly" "02/24/06" 7 2557 2.74546 34.5 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?SpeciesTag=PI23P&SINGLE_ORG_PAGE_ATTR=SINGLE_ORG_PAGE_MAIN" "AAOG00000000" "NZ_AAOG00000000" "coastal seawater" "Penola Strait, Western Antarctic Peninsula" " "
"Polaribacter sp. MED152" 13543 54207 313598 "Bacteria" "Bacteroidetes/Chlorobi" "Aerobic" "Yes" "Rod" "No" "Negative" "assembly" "wgs assembly" "01/27/06" 2 2611 2.9671 30.6 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?SpeciesTag=MED152&SINGLE_ORG_PAGE_ATTR=SINGLE_ORG_PAGE_MAIN" "AANA00000000" "NZ_AANA00000000" "coastal seawater" "Mediterranean Sea" "17215843, 18552178"
"Pseudoalteromonas atlantica T6c" 13454 58283 342610 "Bacteria" "Gammaproteobacteria" "Aquatic" "Mesophilic" "Aerobic" "Yes" "Rod" "No" "Negative" "Shellfish" "Shell disease" "complete" "06/28/2006" "06/07/2011 16:05:43" 1 5.18701 44.6 "DOE Joint Genome Institute" "CP000388" "NC_008228" "coastal seawater, algae" 2537827
"Pseudoalteromonas haloplanktis TAC125" 15713 58431 326442 "Bacteria" "Gammaproteobacteria" "Aquatic" "Psychrophilic" "Aerobic" "Yes" "Curved rod" "No" "Negative" "No" "complete" "10/03/2005" "10/22/2010 12:14:42" 2 3.84 40.1 "CNRS|Genoscope" "CR954246,CR954247" "NC_007481,NC_007482" 16169927 4 35 "coastal seawater" "Terra Adelie, Antarctica" "1447975, 9079288, 10848966, 11112539, 11302501, 12579376, 15544346, 16169927, 16713057, 18437283, 18473957, 19381366, 19778966, 19799549, 20199592, 20209484, 20732427 "
"Pseudoalteromonas sp. SM9913" 39311 61247 234831 "Bacteria" "Gammaproteobacteria" "Aquatic" "Psychrophilic" 15 "Yes" "Negative" "complete" "12/14/2010" "12/16/2010 19:19:33" 2 4 "ShanDong University|Tianjin State Laboratory of Microbial Functional Genomics, TEDA College, Nankai University" "CP001796,CP001797" "NC_014800,NC_014803" 20703316 "deep sea sediment" "17464071, 17506991, 17600056, 19181663, 19544039, 20453143, 20703316, 20876133"
"Pseudoalteromonas tunicata D2" 13456 54181 87626 "Bacteria" "Gammaproteobacteria" "Mesophilic" 28 "Non-halophilic" "Facultative" "Yes" "Rod" "Negative" "assembly" "wgs assembly" "02/24/06" 42 4504 4.98243 39.9 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?SpeciesTag=PTD2&SINGLE_ORG_PAGE_ATTR=SINGLE_ORG_PAGE_MAIN" "AAOH00000000" "NZ_AAOH00000000" 28 "tunicate (Ciona intestinalis)" "Gullmarsjorden, Sweden" " "
"Psychrobacter arcticus 273-4" 9633 58021 259536 "Bacteria" "Gammaproteobacteria" "Specialized" "Psychrophilic" 22 "No" "Rod" "Pairs" "Negative" "No" "complete" "07/20/2005" "10/22/2010 11:19:59" 1 2.6507 42.8 "DOE Joint Genome Institute" "CP000082" "NC_007204" 20154119 -10 28 "permafrost (20--40 ka)" "Siberia" "16738105, 20154119, 21445265 "
"Psychrobacter cryohalolentis K5" 13920 58373 335284 "Bacteria" "Gammaproteobacteria" "Multiple" "Psychrophilic" "Moderate halophilic" "No" "Rod" "Pairs" "complete" "04/18/2006" "06/02/2011 12:07:51" 1 1 3.1011 42.2 "DOE Joint Genome Institute" "CP000323,CP000324" "NC_007969,NC_007968" "permafrost (20--40 ka), cryopeg" "Siberia" "12662179, 16738105"
"Psychrobacter sp. PRwf-1" 15759 58459 349106 "Bacteria" "Gammaproteobacteria" "Aquatic" "Mesophilic" "4-37" "Aerobic" "No" "Coccobacillus" "Negative" "complete" "06/04/2007" "06/30/2011 18:06:01" 1 2 2.99508 44.8 "DOE Joint Genome Institute" "CP000713,CP000715,CP000714" "NC_009524,NC_009517,NC_009516" 4 37 "permafrost, (marine?)" " "
"Psychroflexus torquis ATCC 700755" 13542 54205 313595 "Bacteria" "Bacteroidetes/Chlorobi" "Psychrophilic" "<0-15" "Aerobic" "Yes" "Rod, Coccus" "Filaments" "assembly" "wgs assembly" "04/06/06" 44 4038 6.01445 32.8 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?SpeciesTag=P700755&SINGLE_ORG_PAGE_ATTR=SINGLE_ORG_PAGE_MAIN" "AAPR00000000" "NZ_AAPR00000000" "sea ice" "Prydz Bay, Antarctica" "9251193, 9639931"
"Psychromonas ingrahamii 37" 16187 58521 357804 "Bacteria" "Gammaproteobacteria" "Aquatic" "Psychrophilic" "Anaerobic" "No" "Rod" "No" "Negative" "No" "complete" "12/22/2006" "09/16/2011 11:09:29" 1 4.5596 40.1 "DOE Joint Genome Institute" "CP000510" "NC_008709" -12 "sea ice" "Point Barrow, Alaska" 18460197
"Psychromonas sp. CNPT3" 13583 54249 314282 "Bacteria" "Gammaproteobacteria" "Aquatic" "Psychrophilic" "Facultative" "Yes" "Rod" "Negative" "assembly" "wgs assembly" "03/23/06" 175 2727 2.94527 38.6 "J. Craig Venter Institute" "https://research.venterinstitute.org/moore/SingleOrganism.do?SpeciesTag=PCNPT3&SINGLE_ORG_PAGE_ATTR=SINGLE_ORG_PAGE_MAIN" "AAPG00000000" "NZ_AAPG00000000" "deep seawater" 5800 "North Pacific Ocean" " "
"Pusillimonas sp. T7-7" 65659 66391 1007105 "Bacteria" "Betaproteobacteria" "complete" "04/26/2011" "08/15/2011 14:04:00" 1 1 3.94 "TEDA School of Biological Sciences and Biotechnology, Nankai University|Tianjin Biochip Corp." "CP002663,CP002664" "NC_015458,NC_015459" 21622753 4 30 37 "marine sediment" "petroleum-contaminated site in Bohai Sea, China" 21622753
"Renibacterium salmoninarum ATCC 33209" 19227 58899 288705 "Bacteria" "Actinobacteria" "Host-associated" "Mesophilic" 15 "Facultative" "No" "Coccus" "Singles" "No" "Positive" "Salmonid fish" "Bacterial kidney disease (BKD)" "complete" "12/18/2007" "10/22/2010 13:26:58" 1 3.15525 56.3 "Northwest Fisheries Science Center, NOAA Fisheries Service|University of Washington Genome Center" "CP000910" "NC_010168" 18723615 "fish pathogen (Chinook salmon)" "Oregon" "18723615, 20556855"
"Shewanella baltica OS155" 13386 58259 325240 "Bacteria" "Gammaproteobacteria" "Aquatic" "Mesophilic" "Facultative" "Yes" "Rod" "Singles, Pairs" "Negative" "complete" "02/20/2007" "03/10/2011 18:17:09" 1 4 5.34638 46.2 "DOE Joint Genome Institute" "CP000563,CP000565,CP000566,CP000567,CP000564" "NC_009052,NC_009036,NC_009037,NC_009038,NC_009035" "coastal seawater" "Baltic Sea" "9542087, 9632735, 12192070, 12575936, 16367748, 20944214"
"Shewanella baltica OS185" 17643 58743 402882 "Bacteria" "Gammaproteobacteria" "Aquatic" "Mesophilic" "Facultative" "Yes" "Rod" "Negative" "No" "None" "complete" "07/10/2007" "06/29/2011 18:06:48" 1 1 5.31269 46.3 "DOE Joint Genome Institute" "CP000753,CP000754" "NC_009665,NC_009661" "coastal seawater" "Baltic Sea" " "
"Shewanella baltica OS195" 13389 58261 399599 "Bacteria" "Gammaproteobacteria" "Aquatic" "Mesophilic" "Facultative" "Yes" "Rod" "Singles, Pairs" "Negative" "complete" "11/21/2007" "07/05/2011 21:03:13" 1 3 5.54828 46.2 "DOE Joint Genome Institute" "CP000891,CP000893,CP000894,CP000892" "NC_009997,NC_009999,NC_010000,NC_009998" "coastal seawater" "Baltic Sea" " "
"Shewanella baltica OS223" 17985 58775 407976 "Bacteria" "Gammaproteobacteria" "Aquatic" "Mesophilic" "Facultative" "Yes" "Rod" "Negative" "No" "complete" "12/15/2008" "07/29/2011 13:07:39" 1 3 5.3579 46.3 "US DOE Joint Genome Institute (JGI-PGF)|DOE Joint Genome Institute|JGI-PGF" "CP001252,CP001254,CP001255,CP001253" "NC_011663,NC_011668,NC_011665,NC_011664" "coastal seawater" "Baltic Sea" " "
"Shewanella frigidimarina NCIMB 400" 13391 58265 318167 "Bacteria" "Gammaproteobacteria" "Multiple" "Mesophilic" "20-22" "Facultative" "Yes" "Rod" "Singles, Pairs" "Negative" "complete" "09/14/2006" "10/22/2010 11:54:57" 1 4.84526 41.6 "DOE Joint Genome Institute" "CP000447" "NC_008345" "sea ice" "Antarctica" "1333793, 10028262, 10455032, 10581549, 10861223, 11231004, 12093271, 12356299, 12867466, 14609326, 15109257, 16699170, 18950243, 20944218"
"Shewanella halifaxensis HAW-EB4" 20241 59007 458817 "Bacteria" "Gammaproteobacteria" "Psychrophilic" 10 "Facultative" "Yes" "Rod" "No" "Negative" "complete" "02/07/2008" "07/14/2011 16:32:28" 1 5.22692 44.6 "DOE Joint Genome Institute" "CP000931" "NC_010334" "marine sediment" "Emerald Basin, Nova Scotia, Canada" "16403888, 20174598"
"Shewanella loihica PV-4" 13906 58349 323850 "Bacteria" "Gammaproteobacteria" "Multiple" "Mesophilic" "Facultative" "Yes" "Rod" "Singles, Pairs" "Negative" "complete" "03/07/2007" "10/22/2010 12:05:11" 1 4.6 53.7 "DOE Joint Genome Institute" "CP000606" "NC_009092" 0 18 37 "hydrothermal vent" "Loihi Seamount, Pacific Ocean" "20944218, 21090815"
"Shewanella pealeana ATCC 700345" 17415 58705 398579 "Bacteria" "Gammaproteobacteria" "Mesophilic" "Facultative" "Yes" "Rod" "Negative" "No" "None" "complete" "10/04/2007" "07/05/2011 22:09:56" 1 5.17458 44.7 "US DOE Joint Genome Institute|DOE Joint Genome Institute|JGI-PGF" "CP000851" "NC_009901" "squid (Loligo pealei)" "Wood Hole, Massachusetts" " "
"Shewanella piezotolerans WP3" 17675 58745 225849 "Bacteria" "Gammaproteobacteria" "Specialized" "Mesophilic" "15-20" "Facultative" "Yes" "Rod" "Negative" "No" "None" "complete" "11/13/2008" "11/01/2010 12:18:42" 1 5.4 43.3 "James D. Watson Institute of Genome Sciences|Chinese Academy of Sciences|Hangzhou Genomics Institute|Key Laboratory of Marine Biogenetic Resources, State Oceanic administration/Third Institute of Oceanography, State Oceanic Administration|Zhejiang University/Beijing Genomics Institute" "CP000472" "NC_011566" 18398463 "deep marine sediment" "west Pacific Ocean (1914 m)" "15064982, 16133656, 17220442, 18193200, 18398463 "
"Shewanella sediminis HAW-EB3" 18789 58835 425104 "Bacteria" "Gammaproteobacteria" "Aquatic" "Psychrophilic" 10 "Facultative" "Yes" "Rod" "No" "Negative" "No" "complete" "09/18/2007" "10/22/2010 13:20:39" 1 5.5 46.1 "US DOE Joint Genome Institute (JGI-PGF)|DOE Joint Genome Institute|JGI-PGF" "CP000821" "NC_009831" "marine sediment" "Halifax Harbour, Nova Scotia, Canada" 20174598
"Shewanella violacea DSS12" 34739 47085 637905 "Bacteria" "Gammaproteobacteria" "Specialized" "Psychrophilic" "Facultative" "Yes" "Rod" "No" "Negative" "No" "complete" "04/01/2010" "07/28/2011 20:08:37" 1 5 "Nara Institute of Science and Technology" "AP011177" "NC_014012" "marine sediment" "Ryukyu Trench, Philippine Sea (5100 m)" "8889814, 9163523, 9783159, 9818352, 10483731, 10760597, 10781566, 11111034, 11272828, 12153713, 15178458, 15346766, 15844013, 17852338, 20040594, 20458400, Nakasone2005 "
"Shewanella woodyi ATCC 51908" 17455 58721 392500 "Bacteria" "Gammaproteobacteria" "Multiple" "Mesophilic" 25 "Non-halophilic" "Facultative" "Yes" "Rod" "Negative" "No" "None" "complete" "03/13/2008" "07/07/2011 12:05:10" 1 5.9354 43.7 "US DOE Joint Genome Institute|DOE Joint Genome Institute|JGI-PGF" "CP000961" "NC_010506" "squid" "Alboran Sea, Mediterranean (200--300 m)" 9336902
"Sphingopyxis alaskensis RB2256" 13907 58351 317655 "Bacteria" "Alphaproteobacteria" "Aquatic" "Aerobic" "No" "Negative" "complete" "05/18/2006" "10/22/2010 12:05:24" 1 1 3.37417 65.5 "DOE Joint Genome Institute" "CP000356,CP000357" "NC_008048,NC_008036" 19805210 5 45 "marine seawater" "Resurrection Bay, Gulf of Alaska" "10404225, 11679312, 19805210 "