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glprc.py
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glprc.py
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##################################
#
# glprc.py
# Copyright (C) Louisiana State University, Health Sciences Center
# Written by 2011-2013 Ruben Tikidji-Hamburyan <[email protected]>
# Will Coleman 2013 [email protected]
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or (at
# your option) any later version.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE, GOOD TITLE or
# NON INFRINGEMENT. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
#
###################################
from PyQt4 import QtGui, QtCore
import importprc
import string
import sys
from xml.sax import make_parser
import icons
class odprc:
def __init__(self):
self.name = "***"
self.id = None
self.gsyn = []
self.data = []
self.f2 = False
class prcviewer(QtGui.QWidget):
def __init__(self,prc,parent=None):
super(prcviewer, self).__init__()
self.prc = prc
#self.prc.data = prc.data.sort()
self.view=[ [True for f1 in prc.data[0][1]], [True for f2 in prc.data[0][2] ] ]
self.axescolor = QtGui.QColor(0, 0, 0)
self.backgroundcolor = QtGui.QColor(255, 255, 255)
self.margins =[45,15,25,10] ##Left Right Botom Top
self.font = QtGui.QFont('Decorative', 10)
self.linewidth = 2
self.axeswidth = 1
self.colors = [[], []]
r,g,b = 255,0,0
for i in prc.data[0][1]:
self.colors[0].append(QtGui.QColor(r, g, b))
r -= 32
g += 16
if r<0 : r=255
if g>255: g = 0
r,g,b = 0,0,255
for i in prc.data[0][2]:
self.colors[1].append(QtGui.QColor(r, g, b))
b -= 32
g += 16
if b<0 : b=255
if g>255: g = 0
self.min = prc.data[0][1][0]
self.max = prc.data[0][1][0]
self.vscale, self.hscale = 1.0,0.1
self.minmax()
def resizeEvent(self,event):
#self.setFixedSize(event.size())
size=event.size()
self.vscale = (self.max - self.min)/(size.height() - self.margins[2] - self.margins[3])
self.hscale = 1.0/(self.width() - self.margins[0] - self.margins[1])
#print "Resize:%dx%d [%gx%g][%gx%g]"%(self.width(),size.height(),self.hscale,self.vscale,self.min,self.max)
def paintEvent(self, event):
#print "paint: ",
qp = QtGui.QPainter()
pen = QtGui.QPen(QtCore.Qt.black, self.linewidth, QtCore.Qt.SolidLine)
h,w = self.size().height(), self.size().width()
#print "size: %dx%d"%(w,h),
qp.begin(self)
qp.setBrush(self.backgroundcolor)
qp.drawRect(0, 0, w, h)
idx = -1
for i in xrange( len( self.prc.data[0][1] )):
idx += 1
if not self.view[0][idx]: continue
pen.setColor( self.colors[0][idx] )
qp.setPen(pen)
for idd in xrange( len(self.prc.data) - 1 ):
y0 = h - (self.prc.data[idd ][1][i]-self.min)/self.vscale-self.margins[2]
y1 = h - (self.prc.data[idd+1][1][i]-self.min)/self.vscale-self.margins[2]
x0 = self.prc.data[idd ][0] / self.hscale + self.margins[0]
x1 = self.prc.data[idd+1][0] / self.hscale + self.margins[0]
qp.drawLine(x0,y0,x1,y1)
if self.prc.f2:
idx = -1
for i in xrange( len( self.prc.data[0][2] )):
idx += 1
if not self.view[1][idx]: continue
pen.setColor( self.colors[1][idx] )
qp.setPen(pen)
for idd in xrange( len(self.prc.data) - 1 ):
y0 = h - (self.prc.data[idd ][2][i]-self.min)/self.vscale-self.margins[2]
y1 = h - (self.prc.data[idd+1][2][i]-self.min)/self.vscale-self.margins[2]
x0 = self.prc.data[idd ][0] / self.hscale + self.margins[0]
x1 = self.prc.data[idd+1][0] / self.hscale + self.margins[0]
qp.drawLine(x0,y0,x1,y1)
pen.setColor(self.axescolor)
qp.setBrush(self.axescolor)
qp.setFont(self.font)
pen.setWidth(self.axeswidth)
qp.setPen(pen)
#Axes
qp.drawLine(self.margins[0],self.margins[3],self.margins[0],h-self.margins[2])
#Text and Tips
qp.drawText(QtCore.QRect(0,0,self.margins[0],self.margins[3]*2),QtCore.Qt.AlignCenter,"%7.5f"%self.max)
qp.drawLine(self.margins[0]-5,self.margins[3],self.margins[0],self.margins[3])
y0 = h -(self.max/2.0 - self.min)/self.vscale-self.margins[2]
qp.drawText(QtCore.QRect(0,y0-self.margins[3],self.margins[0],self.margins[3]*2),QtCore.Qt.AlignCenter,"%7.5f"%(self.max/2.0) )
qp.drawLine(self.margins[0]-5,y0,self.margins[0],y0)
if self.min > 0.0:
y0 = h -self.margins[2]
qp.drawText(QtCore.QRect(0,y0-self.margins[3],self.margins[0],self.margins[3]*2),QtCore.Qt.AlignCenter,"%7.5f"%self.min)
qp.drawLine(self.margins[0]-5,y0,w-self.margins[1],y0)
elif abs(self.min) < abs(self.max)/8 :
y0 = h + self.min/self.vscale-self.margins[2]
qp.drawText(QtCore.QRect(0,y0-self.margins[3],self.margins[0],self.margins[3]*2),QtCore.Qt.AlignCenter,"0.0")
qp.drawLine(self.margins[0]-5,y0,w-self.margins[1],y0)
elif abs(self.min) < abs(self.max)/4 :
y0 = h -self.margins[2]
qp.drawText(QtCore.QRect(0,y0-self.margins[3],self.margins[0],self.margins[3]*2),QtCore.Qt.AlignCenter,"%7.5f"%(self.min))
qp.drawLine(self.margins[0]-5,y0,self.margins[0],y0)
y0 = h + self.min/self.vscale-self.margins[2]
qp.drawText(QtCore.QRect(0,y0-self.margins[3],self.margins[0],self.margins[3]*2),QtCore.Qt.AlignCenter,"0.0")
qp.drawLine(self.margins[0]-5,y0,w-self.margins[1],y0)
else :
y0 = h -self.margins[2]
qp.drawText(QtCore.QRect(0,y0-self.margins[3],self.margins[0],self.margins[3]*2),QtCore.Qt.AlignCenter,"%7.5f"%(self.min))
qp.drawLine(self.margins[0]-5,y0,self.margins[0],y0)
y0 = h -(self.min/2.0 - self.min)/self.vscale-self.margins[2]
qp.drawText(QtCore.QRect(0,y0-self.margins[3],self.margins[0],self.margins[3]*2),QtCore.Qt.AlignCenter,"%7.5f"%(self.min/2.0) )
qp.drawLine(self.margins[0]-5,y0,self.margins[0],y0)
y0 = h + self.min/self.vscale-self.margins[2]
qp.drawText(QtCore.QRect(0,y0-self.margins[3],self.margins[0],self.margins[3]*2),QtCore.Qt.AlignCenter,"0.0")
qp.drawLine(self.margins[0]-5,y0,w-self.margins[1],y0)
x0 = self.margins[0] + self.prc.data[-1][0]/4.0/self.hscale
qp.drawText(QtCore.QRect(x0-self.margins[1],y0+10,self.margins[1]*2,self.margins[3]*2),QtCore.Qt.AlignCenter,"%5.3f"%(self.prc.data[-1][0]/4.0))
qp.drawLine(x0,y0,x0,y0+5)
x0 = self.margins[0] + self.prc.data[-1][0]/2.0/self.hscale
qp.drawText(QtCore.QRect(x0-self.margins[1],y0+10,self.margins[1]*2,self.margins[3]*2),QtCore.Qt.AlignCenter,"%5.3f"%(self.prc.data[-1][0]/2.0))
qp.drawLine(x0,y0,x0,y0+5)
x0 = self.margins[0] + self.prc.data[-1][0]*3.0/4.0/self.hscale
qp.drawText(QtCore.QRect(x0-self.margins[1],y0+10,self.margins[1]*2,self.margins[3]*2),QtCore.Qt.AlignCenter,"%5.3f"%(self.prc.data[-1][0]*3.0/4.0))
qp.drawLine(x0,y0,x0,y0+5)
x0 = self.margins[0] + self.prc.data[-1][0]/self.hscale
qp.drawText(QtCore.QRect(x0-self.margins[1],y0+10,self.margins[1]*2,self.margins[3]*2),QtCore.Qt.AlignCenter,"%5.3f"%(self.prc.data[-1][0]))
qp.drawLine(x0,y0,x0,y0+5)
qp.end()
#print "done"
def minmax(self):
for data in self.prc.data:
idx = 0
for sem in data[1]:
if self.min > sem and self.view[0][idx]: self.min = sem
if self.max < sem and self.view[0][idx]: self.max = sem
idx+=1
idx = 0
if not self.prc.f2: continue
for sem in data[2]:
if self.min > sem and self.view[1][idx]: self.min = sem
if self.max < sem and self.view[1][idx]: self.max = sem
idx+=1
class prcviewdlg(QtGui.QDialog):
def __init__(self, prc, parent=None):
super(prcviewdlg, self).__init__()
self.setWindowTitle(prc.name + ' :: PRC Viewer')
self.setGeometry(300, 300, 280, 270)
self.view = prcviewer(prc, parent = self)
vbox = QtGui.QVBoxLayout()
vbox.addWidget(self.view)
self.setLayout(vbox)
class prceditor(QtGui.QDialog):
def __init__(self, parent=None):
super(prceditor, self).__init__()
self.setWindowTitle('PRC Editor')
self.nameedit = QtGui.QLineEdit("Enter Prc name")
importButton = QtGui.QPushButton(QtGui.QIcon(':/import.png'),"&Import",self)
prevButton = QtGui.QPushButton(QtGui.QIcon(':/previewer.png'),"&Preview",self)
okButton = QtGui.QPushButton(QtGui.QIcon(':/dialog-ok.png'),"&OK",self)
cancelButton = QtGui.QPushButton(QtGui.QIcon(':/dialog-cancel.png'),"&Cancel",self)
setgButton = QtGui.QPushButton(QtGui.QIcon(':/gsyn.png'),"Reset Gsyn",self)
clsblButton = QtGui.QPushButton(QtGui.QIcon(':/close-tbl.png'),"Close Table",self)
insRowButton = QtGui.QPushButton(QtGui.QIcon(':/insert-row.png'),"Insert Row",self)
insColButton = QtGui.QPushButton(QtGui.QIcon(':/insert-column.png'),"Insert Column",self)
delrButton = QtGui.QPushButton(QtGui.QIcon(':/remove-row.png'),"Remove Row",self)
sortButton = QtGui.QPushButton(QtGui.QIcon(':/close-tbl.png'),"Resort Table",self)
remButton = QtGui.QPushButton(QtGui.QIcon(':/remove-all.png'),"Remove All",self)
hboxU = QtGui.QHBoxLayout()
hboxU.addWidget(self.nameedit)
hboxU.addWidget(importButton)
hboxU.addWidget(prevButton)
hboxU.addStretch(1)
hboxU.addWidget(okButton )
hboxU.addWidget(cancelButton )
self.tbl = QtGui.QTableWidget()
hboxD = QtGui.QHBoxLayout()
hboxD.addStretch(1)
hboxD.addWidget(setgButton)
hboxD.addWidget(clsblButton)
hboxD.addWidget(insRowButton)
hboxD.addWidget(insColButton)
hboxD.addWidget(delrButton)
hboxD.addWidget(sortButton)
hboxD.addWidget(remButton)
vbox = QtGui.QVBoxLayout()
vbox.addLayout(hboxU)
vbox.addWidget(self.tbl)
vbox.addLayout(hboxD)
self.setLayout(vbox)
self.prc=None
self.importer = None
self.connect(self.nameedit, QtCore.SIGNAL('editingFinished()'), self.rename)
self.connect(importButton, QtCore.SIGNAL('clicked()'), self.importprc)
self.connect(prevButton, QtCore.SIGNAL('clicked()'), self.preview)
self.connect(okButton, QtCore.SIGNAL('clicked()'), self.ok)
self.connect(cancelButton, QtCore.SIGNAL('clicked()'), self.cancel)
self.connect(setgButton, QtCore.SIGNAL('clicked()'), self.setgsyn)
self.connect(clsblButton, QtCore.SIGNAL('clicked()'), self.closetbl)
self.connect(insRowButton, QtCore.SIGNAL('clicked()'), self.insertrow)
self.connect(insColButton, QtCore.SIGNAL('clicked()'), self.insertcol)
self.connect(delrButton, QtCore.SIGNAL('clicked()'), self.deleterow)
self.connect(sortButton, QtCore.SIGNAL('clicked()'), self.resort)
self.connect(remButton, QtCore.SIGNAL('clicked()'), self.clear)
self.connect(self.tbl, QtCore.SIGNAL('cellChanged(int, int)'), self.cellUpDate)
def setprc(self, prc):
if self.prc != None: del self.prc
self.prc = prc
self.nameedit.setText(self.prc.name)
self.readprc()
def importprc(self):
filename = QtGui.QFileDialog.getOpenFileName(self, 'Open file', '',
"Prc Xml Model(*.pxm);; Data file (*.dat *.data)")
if len(filename) == 0: return
if filename[-4:] == ".pxm" or filename[-4:] == ".PXM":
self.readpxm(filename)
return
fdil = QtGui.QInputDialog(self)
fdil.setLabelText("Select order of PRC function")
fdil.setComboBoxEditable(False)
fdil.setComboBoxItems(["first order", "second order"])
ok = fdil.exec_()
function = fdil.textValue()
if not ok: return
if self.importer == None:
self.importer = importprc.importprc()
if function != "first order" :
self.importer.readfile(filename,fx="2")
else:
self.importer.readfile(filename)
newprc = self.importer.getglprc()
if newprc.gsyn == None :
newprc.gsyn = []
for i in xrange( len( newprc.data[0][1]) ):
dok = False
while not dok:
double,ok = QtGui.QInputDialog.getText(self,"PRC Editor","Set gsyn value for column %d in imported file"%i)
double,dok = double.toDouble()
newprc.gsyn.append("%g"%double)
else:
newprc.gsyn = string.split(newprc.gsyn,',')
if len( newprc.gsyn ) != len( newprc.data[0][1]) :
for i in xrange( len( newprc.data[0][1]) - len( newprc.gsyn ) ):
dok = False
while not dok:
double,ok = QtGui.QInputDialog.getText(self,"PRC Editor","Set gsyn value for column %d in imported file"%(i+len( newprc.gsyn )-1) )
double,dok = double.toDouble()
newprc.gsyn.append("%g"%double)
elif (len( newprc.gsyn) < len( newprc.data[0][2]) ) and (newprc.f2 == True):
for i in xrange( len( newprc.data[0][2]) -len( newprc.gsyn ) ):
dok = False
while not dok:
double,ok = QtGui.QInputDialog.getText(self,"PRC Editor","Set gsyn value for column %d in imported file"%i)
double,dok = double.toDouble()
newprc.gsyn.append("%g"%double)
self.importer.gsyn=string.join(newprc.gsyn,',')
if self.prc != None:
newprc.id=self.prc.id
newprc.name=self.prc.name
del self.prc
self.prc = newprc
self.readprc()
def readpxm(self,filename):
pparser = importprc.prcparcerpxm(mode="list")
parser=make_parser()
parser.setContentHandler(pparser)
parser.parse(filename.toUtf8().data())
fdil = QtGui.QInputDialog(self)
fdil.setLabelText("Select exctracted PRC function")
fdil.setComboBoxEditable(False)
fdil.setComboBoxItems(pparser.prclst)
ok = fdil.exec_()
function = fdil.textValue()
if not ok: return
self.clear()
if self.importer != None:
del self.importer
self.importer = importprc.importprc()
self.importer.name = function
self.importer.readfile(filename.toUtf8().data(),format="pxm")
if self.prc != None:
del self.prc
self.prc = self.importer.getglprc()
self.prc.gsyn = string.split(self.prc.gsyn,',')
self.readprc()
def readprc(self, prcobj=None):
if prcobj != None:
self.prc = prcobj
self.tbl.clear()
hitem = ["ph"]
for gsn in self.prc.gsyn:
hitem.append("F1:%s"%gsn)
if self.prc.f2:
self.tbl.setColumnCount(1 + len(self.prc.gsyn) *2 )
for gsn in self.prc.gsyn:
hitem.append("F2:%s"%gsn)
else:
self.tbl.setColumnCount(1 + len(self.prc.gsyn) )
self.tbl.setHorizontalHeaderLabels(hitem)
row = 0
self.tbl.setRowCount( len(self.prc.data) )
for data in self.prc.data:
col = 0
item = QtGui.QTableWidgetItem(data[0])
item.setData(0,data[0])
self.tbl.setItem(row,col,item)
for fd in xrange(len(data[1])):
col+=1
item = QtGui.QTableWidgetItem(data[0])
item.setData(0,data[1][fd])
self.tbl.setItem(row,col,item)
for fd in xrange(len(data[2])):
col+=1
item = QtGui.QTableWidgetItem(data[0])
item.setData(0,data[2][fd])
self.tbl.setItem(row,col,item)
row += 1
self.nameedit.setText(self.prc.name)
def insertrow(self):
self.prc.data.append(["0.000000",[],[] ] )
#for i in self.prc.data[0][1]:
self.prc.data[-1][1].append("0.000000")
#for i in self.prc.data[0][2]:
if self.prc.data[-1][2]: #check for empty list
self.prc.data[-1][2].append("0.000000")
self.readprc()
def insertcol(self):
fdil = QtGui.QInputDialog(self)
fdil.setLabelText("Select order of new PRC column")
fdil.setComboBoxEditable(False)
fdil.setComboBoxItems(["first order", "first and second order"])
ok = fdil.exec_()
function = fdil.textValue()
if not ok: return
double,ok = QtGui.QInputDialog.getText(self,"PRC Editor","Set gsyn value for column this column" )
if not ok: return
if function == "first order":
for rows in self.prc.data:
rows[1].append("x.x")
else:
self.prc.f2 = True
for rows in self.prc.data:
rows[1].append("x.x")
rows[2].append("x.x")
self.prc.gsyn.append(str(double))
self.readprc()
def closetbl(self):
if len(self.prc.data[0][1]) != len(self.prc.data[0][2]): return
self.insertrow()
self.prc.data[-1][0]="1.000000"
for idx in xrange(len( self.prc.data[0][1] ) ):
self.prc.data[-1][2][idx] = self.prc.data[0][1][idx]
self.prc.data[-1][1][idx] = "0.000000"
self.readprc()
def clear(self):
if self.prc != None:
del self.prc
self.prc = None
if self.importer != None:
del self.importer
self.importer = None
self.tbl.clear()
self.tbl.setRowCount(0)
self.tbl.setColumnCount(0)
def preview(self):
if self.prc == None: return
if not self.upDate(): return
dprc = odprc()
dprc.name = self.prc.name
dprc.gsyn = [ float(syn) for syn in self.prc.gsyn]
dprc.f2 = self.prc.f2
for data in self.prc.data:
dprc.data.append([ float(data[0]), [float(d1) for d1 in data[1] ], [float(d2) for d2 in data[2] ] ])
prcview = prcviewdlg(dprc,self)
prcview.exec_()
def resort(self):
self.tbl.sortByColumn(0,QtCore.Qt.AscendingOrder)
def rename(self):
if self.prc == None:
self.prc = odprc()
self.prc.name = self.nameedit.text()
self.setWindowTitle(self.prc.name+' :: PRC Editor')
def setgsyn(self):
if self.prc == None: return
for ind in xrange(len(self.prc.gsyn)):
double,ok = QtGui.QInputDialog.getText(self,"PRC Editor","Set gsyn value for column %d [%g]"%(ind,self.prc.gsyn[ind]) )
if ok:
self.prc.gsyn[ind]=(float(double))
hitem = ["ph"]
for gsn in self.prc.gsyn:
hitem.append("F1:%g"%gsn)
if self.prc.f2:
self.tbl.setColumnCount(1 + len(self.prc.gsyn) *2 )
for gsn in self.prc.gsyn:
hitem.append("F2:%g"%gsn)
else:
self.tbl.setColumnCount(1 + len(self.prc.gsyn) )
self.tbl.setHorizontalHeaderLabels(hitem)
def deleterow(self):
didx = self.tbl.currentRow()
if didx < 0 : return
self.prc.data = self.prc.data[0:didx]+self.prc.data[didx+1:]
self.readprc()
def upDate(self):
if self.nameedit.text().length() < 1:
QtGui.QMessageBox.critical(self,"Critical ERROR!"," You should specify the name of PRC ",QtGui.QMessageBox.Ok,0)
return False
####Test!
fl = len(self.prc.data[0][1])
for idx in xrange(self.tbl.rowCount()):
if fl < len(self.prc.data[idx][1]): fl = len(self.prc.data[idx][1])
if fl < len(self.prc.data[idx][2]): fl = len(self.prc.data[idx][2])
flg = False
for idx in xrange(self.tbl.rowCount()):
if fl > len(self.prc.data[idx][1]):
self.prc.data[idx][1] += [ "xx" for cnt in xrange(fl - len(self.prc.data[idx][1]) ) ]
flg = True
if fl > len(self.prc.data[idx][2]) and len(self.prc.data[0][2]) != 0:
self.prc.data[idx][2] += [ "xx" for cnt in xrange(fl - len(self.prc.data[idx][2]) ) ]
flg = True
if flg: self.readprc()
for idx in xrange(self.tbl.rowCount()):
idd = 0
data,ok = self.tbl.item(idx,0).data(0).toDouble()
if not ok:
QtGui.QMessageBox.critical(self,"Critical ERROR!","The cell %dx%d isn't an number!"%(idx,idd),QtGui.QMessageBox.Ok,0)
return False
self.prc.data[idx][0] = "%12.9f"%data
for iter in xrange( len(self.prc.data[idx][1]) ):
idd += 1
data,ok = self.tbl.item(idx,idd).data(0).toDouble()
if not ok:
QtGui.QMessageBox.critical(self,"Critical ERROR!","The cell %dx%d isn't an number!"%(idx,idd),QtGui.QMessageBox.Ok,0)
return False
self.prc.data[idx][1][iter] = "%g"%data
if not self.prc.f2: continue
for iter in xrange( len(self.prc.data[idx][2]) ):
idd += 1
data,ok = self.tbl.item(idx,idd).data(0).toDouble()
if not ok:
QtGui.QMessageBox.critical(self,"Critical ERROR!","The cell %dx%d isn't an number!"%(idx,idd),QtGui.QMessageBox.Ok,0)
return False
self.prc.data[idx][2][iter] = "%g"%data
self.prc.name=self.nameedit.text().toUtf8().data()
self.readprc()
return True
def cellUpDate(self, x, y):
if y>0:
self.prc.data[x][y][0] = str(self.tbl.item(x, y).text())
else:
self.prc.data[x][y] = str(self.tbl.item(x, y).text())
def ok(self):
if not self.upDate(): return
#Will
# Check that ph ends with one. If last ph is less than one, prompt user to decide how to add row with ph = 1.
lastRow = len(self.prc.data)-1
order = 0
for iter in xrange(1, len(self.prc.data[0])):
if self.prc.data[0][iter] : # Check for empty lists
order+=1
if float(str(self.prc.data[0][0])) > 0: # first ph value is greater than zero
checkZeroOrderOneDialogOptions = ["Set resetting at ph = 0.0 to zero", "Set resetting at ph = 0.0 by extrapolation", "Enter decimal value(s) of resetting at ph = 0.0"]
#Use fewer options when no value at ph = 1 is found
checkZeroOrderTwoDialogFewerOptions = ["Set both order resettings at ph = 0.0 to zero", "Set both order resettings at ph = 1.0 by extrapolation", "Enter decimal value(s) of resetting at ph = 0.0"]
checkZeroOrderTwoDialogOptions = ["Set both order resettings at ph = 0.0 to zero", "Set both order resettings at ph = 1.0 by extrapolation", "Set first order resetting at ph = 0.0 to value of second order at ph = 1.0 and vice versa", "Set first order resetting at ph = 0.0 to zero and second order resetting at ph = 0 to value of first order resetting at ph = 1.0", "Enter decimal value(s) of resetting at ph = 0.0"]
phGreaterThanZeroDialog = QtGui.QInputDialog(self)
phGreaterThanZeroDialog.setComboBoxEditable(False)
labelTextGreaterThanZero = "The first value for the phase (ph) is greater than 0. It must be 0 in order for the uniPRCsim to work correctly.\nProvided are some options for fixing this value.\n\nWhat would you like to do?"
if(order==1):
#print("order is one, doesn't matter if ph at 1 exists")
phGreaterThanZeroDialog.setLabelText(labelTextGreaterThanZero)
phGreaterThanZeroDialog.setComboBoxItems(checkZeroOrderOneDialogOptions)
else:
if float(str(self.prc.data[lastRow][0])) < 1:#Use fewer options when no value at ph = 1 is found
#print("order 2, ph value of 1 doesn't exist either, offer fewer options")
phGreaterThanZeroDialog.setLabelText(labelTextGreaterThanZero)
phGreaterThanZeroDialog.setComboBoxItems(checkZeroOrderTwoDialogFewerOptions)
else:
#print("order 2, ph value of 1 exists and value of zero does not, offer all options")
phGreaterThanZeroDialog.setLabelText(labelTextGreaterThanZero)
phGreaterThanZeroDialog.setComboBoxItems(checkZeroOrderTwoDialogOptions)
ok = phGreaterThanZeroDialog.exec_()
if ok == 0: return
returned = phGreaterThanZeroDialog.textValue()
prcList = list()
prcList2 = list()
numberOfGsyns = 0
if returned == str(checkZeroOrderOneDialogOptions[0]) or returned == str(checkZeroOrderTwoDialogFewerOptions[0]) or returned == str(checkZeroOrderTwoDialogOptions):
while(numberOfGsyns < len(self.prc.gsyn)):
prcList.append("0.000000")
numberOfGsyns +=1
if(order==2):
numberOfGsyns = 0
while(numberOfGsyns < len(self.prc.gsyn)):
prcList2.append("0.000000")
numberOfGsyns +=1
if returned == str(checkZeroOrderOneDialogOptions[1]) or returned == str(checkZeroOrderTwoDialogFewerOptions[1]) or returned == str(checkZeroOrderTwoDialogOptions[1]):
while(numberOfGsyns < len(self.prc.gsyn)):
firstValuePRC = float(self.prc.data[0][1][numberOfGsyns])
firstValuePH = float(self.prc.data[0][0])
secondValuePRC = float(self.prc.data[1][1][numberOfGsyns])
secondValuePH = float(self.prc.data[1][0])
differenceBetweenZeroAndFirstPH = firstValuePH
slope = (secondValuePRC - firstValuePRC)/(secondValuePH - firstValuePH)
extrapolatedValue = -(slope * differenceBetweenZeroAndFirstPH) + firstValuePRC
prcList.append(str(extrapolatedValue))
numberOfGsyns +=1
if(order==2):
numberOfGsyns = 0
while(numberOfGsyns < len(self.prc.gsyn)):
firstValuePRC = float(self.prc.data[0][2][numberOfGsyns])
firstValuePH = float(self.prc.data[0][0])
secondValuePRC = float(self.prc.data[1][2][numberOfGsyns])
secondValuePH = float(self.prc.data[1][0])
differenceBetweenZeroAndFirstPH = firstValuePH
slope = (secondValuePRC - firstValuePRC)/(secondValuePH - firstValuePH)
extrapolatedValue = -(slope * differenceBetweenZeroAndFirstPH) + firstValuePRC
prcList2.append(str(extrapolatedValue))
numberOfGsyns +=1
if returned == str(checkZeroOrderOneDialogOptions[2]) or returned == str(checkZeroOrderTwoDialogFewerOptions[2]) or returned == str(checkZeroOrderTwoDialogOptions[4]):
while(numberOfGsyns < len(self.prc.gsyn)):
floatEntered = False
while(floatEntered == False):
userEnterValueDialog = QtGui.QInputDialog(self)
userEnterValueDialog.setLabelText("Enter a value for prc(s)")
userEnterValueDialog.setComboBoxEditable(True)
ok = userEnterValueDialog.exec_()
if ok == 0: return
try:
userEnteredValue = float(userEnterValueDialog.textValue())
floatEntered = True
prcList.append(str(userEnteredValue))
except ValueError:
notFloatValueMessage = QtGui.QMessageBox(self)
notFloatValueMessage.setText("You must enter a float value.")
notFloatValueMessage.exec_()
numberOfGsyns +=1
if(order==2):
numberOfGsyns = 0
while(numberOfGsyns < len(self.prc.gsyn)):
floatEntered = False
while(floatEntered == False):
userEnterValueDialog = QtGui.QInputDialog(self)
userEnterValueDialog.setLabelText("Enter a value for prc(s)")
userEnterValueDialog.setComboBoxEditable(True)
ok = userEnterValueDialog.exec_()
if ok == 0: return
try:
userEnteredValue = float(userEnterValueDialog.textValue())
floatEntered = True
prcList2.append(str(userEnteredValue))
except ValueError:
notFloatValueMessage = QtGui.QMessageBox(self)
notFloatValueMessage.setText("You must enter a float value.")
notFloatValueMessage.exec_()
numberOfGsyns +=1
if returned == str(checkZeroOrderTwoDialogOptions[2]):
#Set first order resetting at ph = 0.0 to value of second order at ph = 1.0 and vice versa
prcList = self.prc.data[lastRow][2][:]
prcList2 = self.prc.data[lastRow][1][:]
if returned == str(checkZeroOrderTwoDialogOptions[3]):
#Set first order resetting at ph = 0.0 to zero and second order resetting at ph = 0 to value of first order resetting at ph = 1.0
prcList2 = self.prc.data[lastRow][1][:]
while(numberOfGsyns < len(self.prc.gsyn)):
prcList.append("0.000000")
numberOfGsyns +=1
self.prc.data.insert(0,["0.000000",prcList,prcList2 ])
#Second set of checks for ph value less than one
lastRow = len(self.prc.data)-1
if float(str(self.prc.data[lastRow][0])) < 1: #last ph value is less than one
checkOneOrderOneDialogOptions = ["Set resetting at ph = 1.0 to zero", "Set resetting at ph = 1.0 to value of resetting at ph = 0", "Set resetting at ph = 1.0 by extrapolation", "Enter decimal value(s) of resetting at ph = 1.0"]
checkOneOrderTwoDialogOptions = ["Set first and second order resettings at ph = 1.0 to zero", "Set resetting at ph = 1.0 to value of first order resetting at ph = 0", "Set both order resettings at ph = 1.0 by extrapolation", "Set first order resetting at ph = 1.0 to value of second order at ph = 0.0 and vice versa","Set first order resetting at ph = 1.0 to value of second order at ph = 0.0 and second order resetting at ph = 1 to zero","Enter decimal value(s) of resetting at ph = 1.0"]
phLessThanOneDialog = QtGui.QInputDialog(self)
phLessThanOneDialog.setComboBoxEditable(False)
labelTextLessThanOne = "The last value for the phase (ph) is less than 1. It must be 1 in order for the uniPRCsim to work correctly.\nProvided are some options for fixing this value.\n\nWhat would you like to do?"
if(order==1):#Fewer options
phLessThanOneDialog.setLabelText(labelTextLessThanOne)
phLessThanOneDialog.setComboBoxItems(checkOneOrderOneDialogOptions)
else :# when second order prc
phLessThanOneDialog.setLabelText(labelTextLessThanOne)
phLessThanOneDialog.setComboBoxItems(checkOneOrderTwoDialogOptions)
ok = phLessThanOneDialog.exec_()
if ok == 0: return
returned = phLessThanOneDialog.textValue()
prcList = list()
prcList2 = list()
numberOfGsyns = 0
if returned == str(checkOneOrderOneDialogOptions[0]) or returned == str(checkOneOrderTwoDialogOptions[0]):
while(numberOfGsyns < len(self.prc.gsyn)):
prcList.append("0.000000")
numberOfGsyns +=1
if(order==2):
numberOfGsyns = 0
while(numberOfGsyns < len(self.prc.gsyn)):
prcList2.append("0.000000")
numberOfGsyns +=1
if returned == str(checkOneOrderOneDialogOptions[1]):
prcList = self.prc.data[0][1][:]
if returned == str(checkOneOrderTwoDialogOptions[1]):
prcList = self.prc.data[0][1][:]
prcList2 = self.prc.data[0][1][:]
if returned == str(checkOneOrderOneDialogOptions[2]) or returned == str(checkOneOrderTwoDialogOptions[2]):
while(numberOfGsyns < len(self.prc.gsyn)):
firstValuePRC = float(self.prc.data[lastRow-1][1][numberOfGsyns])
firstValuePH = float(self.prc.data[lastRow-1][0])
secondValuePRC = float(self.prc.data[lastRow][1][numberOfGsyns])
secondValuePH = float(self.prc.data[lastRow][0])
differenceBetweenOneAndLastPH = 1-secondValuePH
slope = (secondValuePRC - firstValuePRC)/(secondValuePH - firstValuePH)
extrapolatedValue = (slope * differenceBetweenOneAndLastPH) + secondValuePRC
prcList.append(str(extrapolatedValue))
numberOfGsyns +=1
if(order==2):
numberOfGsyns = 0
while(numberOfGsyns < len(self.prc.gsyn)):
firstValuePRC = float(self.prc.data[lastRow-1][2][numberOfGsyns])
firstValuePH = float(self.prc.data[lastRow-1][0])
secondValuePRC = float(self.prc.data[lastRow][2][numberOfGsyns])
secondValuePH = float(self.prc.data[lastRow][0])
differenceBetweenOneAndLastPH = 1-secondValuePH
slope = (secondValuePRC - firstValuePRC)/(secondValuePH - firstValuePH)
extrapolatedValue = (slope * differenceBetweenOneAndLastPH) + secondValuePRC
prcList2.append(str(extrapolatedValue))
numberOfGsyns +=1
if returned == str(checkOneOrderTwoDialogOptions[3]):
prcList = self.prc.data[0][2][:]
prcList2 = self.prc.data[0][1][:]
if returned == str(checkOneOrderTwoDialogOptions[4]):
prcList = self.prc.data[0][2][:]
while(numberOfGsyns < len(self.prc.gsyn)):
prcList2.append("0.000000")
numberOfGsyns +=1
if returned == str(checkOneOrderOneDialogOptions[3]) or returned == str(checkOneOrderTwoDialogOptions[5]):
while(numberOfGsyns < len(self.prc.gsyn)):
floatEntered = False
while(floatEntered == False):
userEnterValueDialog = QtGui.QInputDialog(self)
userEnterValueDialog.setLabelText("Enter a value for prc(s)")
userEnterValueDialog.setComboBoxEditable(True)
ok = userEnterValueDialog.exec_()
if ok == 0: return
try:
userEnteredValue = float(userEnterValueDialog.textValue())
floatEntered = True
prcList.append(str(userEnteredValue))
except ValueError:
notFloatValueMessage = QtGui.QMessageBox(self)
notFloatValueMessage.setText("You must enter a float value.")
notFloatValueMessage.exec_()
numberOfGsyns +=1
if(order==2):
numberOfGsyns = 0
while(numberOfGsyns < len(self.prc.gsyn)):
floatEntered = False
while(floatEntered == False):
userEnterValueDialog = QtGui.QInputDialog(self)
userEnterValueDialog.setLabelText("Enter a value for prc(s)")
userEnterValueDialog.setComboBoxEditable(True)
ok = userEnterValueDialog.exec_()
if ok == 0: return
try:
userEnteredValue = float(userEnterValueDialog.textValue())
floatEntered = True
prcList2.append(str(userEnteredValue))
except ValueError:
notFloatValueMessage = QtGui.QMessageBox(self)
notFloatValueMessage.setText("You must enter a float value.")
notFloatValueMessage.exec_()
numberOfGsyns +=1
self.prc.data.append(["1.000000",prcList,prcList2 ])
if(self.prc.name=="..."):
userEnterPRCNameDialog = QtGui.QInputDialog(self)
userEnterPRCNameDialog.setLabelText("Enter a name for PRC")
userEnterPRCNameDialog.setComboBoxEditable(True)
ok = userEnterPRCNameDialog.exec_()
if ok == 0: return
self.prc.name = userEnterPRCNameDialog.textValue()
#End Will
self.accept()
def cancel(self):
#do something to save
self.reject()
class glprc:
def __init__(self,parent = None, mainwnd = None, menubar = None, toolbar = None):
self.parent = parent
self.mainwnd = mainwnd
self.object = "prc"
prcinsr = QtGui.QAction(QtGui.QIcon(':/prc.png'), 'Insert/Edit PRC', mainwnd)
prcinsr.setShortcut('Ctrl+P')
prcinsr.setStatusTip('Insert or Edit selected PRC')
mainwnd.connect(prcinsr, QtCore.SIGNAL('triggered()'), self.insert)
prcprvw = QtGui.QAction(QtGui.QIcon(':/previewer.png'), 'Preview PRC', mainwnd)
prcprvw.setShortcut('Alt+P')
prcprvw.setStatusTip('Preview PRC')
mainwnd.connect(prcprvw, QtCore.SIGNAL('triggered()'), self.preview)
prcmenu = menubar.addMenu('&PRC')
prcmenu.addAction(prcinsr)
prcmenu.addAction(prcprvw)
toolbar.addAction(prcinsr)
toolbar.addAction(prcprvw)
self.prclst = []
self.ischanged = False
self.tmpprc = None
def clean(self):
del self.prclst
self.prclst = []
self.ischanged = False
self.tmpprc = None
def insert(self):
if not self.parent.isactive : return
edit=prceditor(parent=self.mainwnd)
item = self.mainwnd.tree.currentItem()
ok = False
if item.data(1,QtCore.Qt.UserRole) == self.object:
prcid, ok = item.data(2,QtCore.Qt.UserRole).toInt()
if not ok:
print "Collapes PRC item((("
else:
edit.readprc(prcobj=self.prclst[prcid])
if not edit.exec_(): return
self.ischanged = True
if ok :
self.prclst[prcid] = edit.prc
item.setText(2,edit.prc.name)
else:
newprc = QtGui.QTreeWidgetItem(self.parent.root)
self.parent.root.addChild(newprc)
newprc.setIcon(0,QtGui.QIcon(':/prc.png'))
newprc.setText(1,'PRC:')
newprc.setText(2,edit.prc.name)
newprc.setData(1,QtCore.Qt.UserRole,self.object)
newprc.setData(2,QtCore.Qt.UserRole,len(self.prclst))
edit.prc.id = newprc
self.prclst.append(edit.prc)
def preview(self):
if not self.parent.isactive : return
if self.prclst == None: return
item = self.mainwnd.tree.currentItem()
if item.data(1,QtCore.Qt.UserRole) != self.object: return
prcid, ok = item.data(2,QtCore.Qt.UserRole).toInt()
if not ok: return
prc=self.prclst[prcid]
dprc = odprc()
dprc.name = prc.name
dprc.gsyn = [ float(syn) for syn in prc.gsyn]
dprc.f2 = prc.f2
for data in prc.data:
dprc.data.append([ float(data[0]), [float(d1) for d1 in data[1] ], [float(d2) for d2 in data[2] ] ])
prcview = prcviewdlg(dprc,self)
prcview.exec_()
def remove(self, item):
if item.data(1,QtCore.Qt.UserRole) != self.object: return
prcid, ok = item.data(2,QtCore.Qt.UserRole).toInt()
if not ok: return
if len(self.prclst) <= prcid : return
del self.prclst[prcid].data
self.prclst[prcid].id = None
self.ischanged = True
def click(self):
self.preview()
def save(self):
result = []
for prc in self.prclst:
if prc.id == None: continue
result.append("<prc name=\"%s\" gsyn=\"%s\">"%(prc.name,string.join(prc.gsyn,",")) )
for item in prc.data:
if prc.f2 :
result.append("\t<item ph=\"%s\" prc1=\"%s\" prc2=\"%s\" />"%(item[0],string.join(item[1],","),string.join(item[2],",")) )
else:
result.append("\t<item ph=\"%s\" prc1=\"%s\" />"%(item[0],string.join(item[1],",")) )
result.append("</prc>")
self.ischanged = False
return result
def startpoint(self,name,attr={}):
if name == "prc" and self.tmpprc == None and attr.get("name",0) and attr.get("gsyn",0):
self.tmpprc = odprc()
self.tmpprc.name = attr["name"]
self.tmpprc.gsyn = string.split(attr["gsyn"],",")
return
elif name == "item" and self.tmpprc != None and attr.get("ph",0) and attr.get("prc1",0):
self.tmpprc.data.append([ attr["ph"],string.split(attr["prc1"],","),[] ])
if attr.get("prc2",0):
self.tmpprc.data[-1][2] = string.split(attr["prc2"],",")
self.tmpprc.f2 = True
return
QtGui.QMessageBox.critical(self.mainwnd,"Critical ERROR!","Bad or unexpected tag <%s>!"%name,QtGui.QMessageBox.Ok,0)
return
def stoppoint(self,name):
if name == "item" and self.tmpprc != None: return
elif name == "prc" and self.tmpprc != None:
newprc = QtGui.QTreeWidgetItem(self.parent.root)
self.parent.root.addChild(newprc)
newprc.setIcon(0,QtGui.QIcon(':/prc.png'))
newprc.setText(1,'PRC:')
newprc.setText(2,self.tmpprc.name)
newprc.setData(1,QtCore.Qt.UserRole,self.object)
newprc.setData(2,QtCore.Qt.UserRole,len(self.prclst))
self.tmpprc.id = newprc
self.prclst.append(self.tmpprc)
self.tmpprc = None
return
QtGui.QMessageBox.critical(self.mainwnd,"Critical ERROR!","Bad or unexpected tag closing <%s>!"%name,QtGui.QMessageBox.Ok,0)
return
def getnames(self):
result = []
for x in self.prclst:
if x.id == None: continue
result.append(x.name)
return result
def getdata(self,name):
for x in self.prclst:
if x.id == None: continue
if x.name != name : continue
return x
if __name__ == '__main__':
prc = odprc()
prc.name = "name"
prc.gsyn=[0.5]
for x in xrange(11):
prc.data.append([ float(x)/10.0,[float(x*x)],[] ])
app = QtGui.QApplication(sys.argv)
ex = prceditor()
ex.show()
#ex=prcviewdlg(prc)
#ex.exec_()
app.exec_()