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index.html
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<!DOCTYPE HTML>
<html>
<head>
<meta name="Author" content="Rafael Castro Couto, [email protected]" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta http-equiv="Content-Script-Type" content="text/javascript" />
<meta http-equiv="Content-Style-Type" content="text/css" />
<meta http-equiv="Content-Language" content="en-US" />
<link href="styles.css" rel="stylesheet" type="text/css" />
</head>
<body>
<div id="controls">
<span>Total Progress: <span></span><progress title="0%" id="total_prog" value="0"></progress></span>
<span>Test Progress: <span></span><progress title="0%" id="prog" value="0"></progress></span>
<br>
<span>Sequences: F6(13) F7(21) F8(34) F9(55) 1AGT(38) 1AHO(64)
<input type="text" id="seqs" value="F7" size="15" class="editable"/>
</span>
<span>Steps:<input type="text" id="steps" value="30" class="editable"/></span><br>
<span>ELA(N):<input type="text" id="En" value="1000" class="editable"/></span>
<span>Pop:<input type="text" id="Pop" value="500" class="editable"/></span>
<span>Parents:<input type="text" id="Parent" value="1" class="editable"/>% </span>
<span>Angles:<input type="text" id="Ang_num" value="2" class="editable"/></span>
<span>Global Parameters:<input type="checkbox" checked id="gp" class="editable"/></span><br>
<span>Efficiency:<input type="text" id="Eff" disabled/></span>
<span>Success:<input type="text" id="Eff_success" value="3,2.5,2,1.5,1,0.5,0,-0.5,-1,-1.5,-2,-2.5,3" class="editable"/></span>
<span>Fail:<input type="text" id="Eff_fail" value="0.000003,0.0000025,0.000002,0.0000015,0.000001,0.0000005,0.0000000,-0.0000005,-0.000001,-0.0000015,-0.000002,-0.0000025,-0.000003" class="editable"/></span>
<span>Max:<input type="text" id="Eff_max" value="10" class="editable"/></span>
<span>Min:<input type="text" id="Eff_min" value="1" disabled/></span><br>
<span>Rigity:<input type="text" id="Rig" disabled size="40"/></span>
<span>Success:<input type="text" id="Rig_success" value="0" class="editable"/></span>
<span>Fail:<input type="text" id="Rig_fail" value="0" class="editable"/></span>
<span>Max:<input type="text" id="Rig_max" value="10" class="editable"/></span>
<span>Min:<input type="text" id="Rig_min" value="1" disabled/></span><br>
<span>Rigity Neighbors:<input type="text" id="Rig_neigh" value="2" class="editable"/></span>
<span>Neighbors exp:<input type="text" id="Rig_neighexp" value="(5-n)/4" class="editable"/>
</span>where n(int) = neightbor number and x(float) = current rigidity<br>
<span>Ann(N):<input type="text" id="An" value="200" class="editable"/></span>
<span>Start angle:<input type="text" id="Ann_start" value="Math.PI/4" class="editable"/></span>
<span>Delta:<input type="text" id="Ann_delta" value="0.9" class="editable"/></span>
<input id="start" type="button" value="Start" class="editable"/>
<input id="print" type="button" value="Print" class="editable"/>
<input id="reset" type="button" value="Reset"/>
<a href="docs">Docs</a>
</div>
<div id="results"></div>
<script type="text/javascript" src="js/prefixfree.min.js"></script>
<script type="text/javascript" src="js/utils.js"></script>
<script type="text/javascript" src="js/protein.js"></script>
<script type="text/javascript" src="js/energy.js"></script>
<script type="text/javascript" src="js/jquery.js"></script>
<script type="text/javascript" src="js/highcharts.js"></script>
<script type="text/javascript" src="js/exporting.js"></script>
<script type="text/javascript" src="js/charts.js"></script>
<script type="text/javascript" src="js/initio.js"></script>
</body>
</html>