From e44fab0f7bbb07da1f11aa6491bd155f0d6a722b Mon Sep 17 00:00:00 2001
From: Ernest Prabhakar <ernest@quiltdata.io>
Date: Thu, 5 Oct 2023 10:00:03 -0700
Subject: [PATCH] try prior CI tests

---
 .github/workflows/mega-linter.yml |  7 ++--
 .github/workflows/pkg-test.yml    | 61 +++++++++++++++++++++++++++++++
 .github/workflows/test.yml        | 16 ++++----
 3 files changed, 73 insertions(+), 11 deletions(-)
 create mode 100644 .github/workflows/pkg-test.yml

diff --git a/.github/workflows/mega-linter.yml b/.github/workflows/mega-linter.yml
index 2a10ed4d..a58224a7 100644
--- a/.github/workflows/mega-linter.yml
+++ b/.github/workflows/mega-linter.yml
@@ -27,9 +27,9 @@ jobs:
     steps:
       # Git Checkout
       - name: Checkout Code
-        uses: actions/checkout@8ade135a41bc03ea155e62e844d188df1ea18608 # v4
+        uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # v4
         with:
-          token: ${{ secrets.GITHUB_TOKEN }} # secrets.PAT || 
+          token: ${{ secrets.PAT || secrets.GITHUB_TOKEN }}
           fetch-depth: 0 # If you use VALIDATE_ALL_CODEBASE = true, you can remove this line to improve performances
 
       # MegaLinter
@@ -37,7 +37,7 @@ jobs:
         id: ml
         # You can override MegaLinter flavor used to have faster performances
         # More info at https://megalinter.github.io/flavors/
-        uses: oxsecurity/megalinter/flavors/dotnet@v7.4.0
+        uses: oxsecurity/megalinter/flavors/dotnet@v7.3.0
         env:
           # All available variables are described in documentation
           # https://megalinter.github.io/configuration/
@@ -48,6 +48,7 @@ jobs:
 
       # Upload MegaLinter artifacts
       - name: Archive production artifacts
+        if: ${{ success() }} || ${{ failure() }}
         uses: actions/upload-artifact@v3
         with:
           name: MegaLinter reports
diff --git a/.github/workflows/pkg-test.yml b/.github/workflows/pkg-test.yml
new file mode 100644
index 00000000..51317a7c
--- /dev/null
+++ b/.github/workflows/pkg-test.yml
@@ -0,0 +1,61 @@
+name: Test
+
+on:
+  # Trigger at every push. Action will also be visible from Pull Requests to master
+  push: # Comment this line to trigger action only on pull-requests (not recommended if you don't pay for GH Actions)
+  pull_request:
+    branches: [master]
+
+permissions: read-all
+
+jobs:
+  build:
+    name: Package Test
+    permissions:
+      contents: read
+      id-token: write
+      issues: write
+      pull-requests: write
+
+    strategy:
+      fail-fast: false
+      matrix:
+        os: [ubuntu-latest]
+        java_version: [19]
+    runs-on: ${{ matrix.os }}
+
+    steps:
+    # Git Checkout
+    - name: Checkout Code
+      uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # v4
+      with:
+        token: ${{ secrets.GITHUB_TOKEN }}
+        fetch-depth: 0
+
+    - name: Configure AWS Credentials
+      uses: aws-actions/configure-aws-credentials@v3
+      with:
+        role-to-assume: arn:aws:iam::712023778557:role/GitHub-Testing-NF-Quilt
+        aws-region: us-east-1
+
+    - name: Setup Java ${{matrix.java_version}}
+      uses: actions/setup-java@v3
+      with:
+        java-version: ${{matrix.java_version}}
+        distribution: 'temurin'
+        architecture: x64
+        cache: gradle
+       
+    - name: Setup Gradle
+      uses: gradle/gradle-build-action@v2
+
+    - name: Run Package Tests
+      run: make pkg-test
+
+    - name: Archive production artifacts
+      if: ${{ success() }} || ${{ failure() }}
+      uses: actions/upload-artifact@v3
+      with:
+        name: nf-quilt-pkg-test
+        path: |
+          /home/runner/work/nf-quilt/nf-quilt/plugins/nf-quilt/build/reports/tests/test/
diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index 809d703d..4f3a22e4 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -12,8 +12,8 @@ jobs:
   build:
     name: Test
     permissions:
-      # contents: read
-      # id-token: write
+      contents: read
+      id-token: write
       issues: write
       pull-requests: write
 
@@ -27,17 +27,16 @@ jobs:
     steps:
     # Git Checkout
     - name: Checkout Code
-      uses: actions/checkout@8ade135a41bc03ea155e62e844d188df1ea18608 # v4
+      uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # v4
       with:
         token: ${{ secrets.GITHUB_TOKEN }}
         fetch-depth: 0
 
-    - name: Install Quilt3
-      uses: actions/setup-python@v4
+    - name: Configure AWS Credentials
+      uses: aws-actions/configure-aws-credentials@v3
       with:
-        python-version: '3.10' 
-    - run: python -m pip install quilt3
-    - run: which quilt3
+        role-to-assume: arn:aws:iam::712023778557:role/GitHub-Testing-NF-Quilt
+        aws-region: us-east-1
 
     - name: Setup Java ${{matrix.java_version}}
       uses: actions/setup-java@v3
@@ -54,6 +53,7 @@ jobs:
       run: make test
 
     - name: Archive production artifacts
+      if: ${{ success() }} || ${{ failure() }}
       uses: actions/upload-artifact@v3
       with:
         name: nf-quilt-test-reports