From 8fa98a723780dbd818203db3fbb5cda5445880a2 Mon Sep 17 00:00:00 2001 From: Ernest Prabhakar Date: Tue, 17 Oct 2023 08:38:10 +0200 Subject: [PATCH] cleanup README --- README.md | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/README.md b/README.md index f076eb84..aad59957 100644 --- a/README.md +++ b/README.md @@ -63,7 +63,7 @@ You can also specify these as YAML to pass to `-params-file`: ```yaml input: "quilt+s3://quilt-example#package=examples/hurdat" -outdir: "quilt+s3://seqera-quilt#package=test/hurdat" +outdir: "quilt+s3://nf-core-gallery#package=test/hurdat" ``` Note that `--key` on the command-line corresponds to `params.key` in your script. @@ -83,7 +83,7 @@ For Tower, you can use the "Pre-run script" to set the environment variables. ## II. Advanced URI Options -There are a number of additional paramters you can add to Quilt+ URIs, +There are a number of additional parameters you can add to Quilt+ URIs, in order to customize the behavior of the plugin: * Fragment Parameters: @@ -95,7 +95,7 @@ in order to customize the behavior of the plugin: * Query Parameters: also stored as package-level metadata * **msg**: specify the commit message to use when saving the package - * **readme**: specify a string for the package README + * **readme**: specify a string for the package README_NF_QUILT.md file (will substitute "${variables}"), or SKIP to not create a README * **metadata**: specify SKIP to not push any new metadata (implicit or explicit) * **_any other key_**: specify any other metadata key to store in the package