From 4e5edf0764df94aaf85609cc16e580ccac1c82ae Mon Sep 17 00:00:00 2001
From: "Dr. Ernie Prabhakar" <19791+drernie@users.noreply.github.com>
Date: Wed, 4 Sep 2024 21:21:17 -0700
Subject: [PATCH] osSep

---
 .../src/main/nextflow/quilt/jep/QuiltPackage.groovy    |  2 +-
 .../src/main/nextflow/quilt/nio/QuiltPath.groovy       | 10 +++++++---
 2 files changed, 8 insertions(+), 4 deletions(-)

diff --git a/plugins/nf-quilt/src/main/nextflow/quilt/jep/QuiltPackage.groovy b/plugins/nf-quilt/src/main/nextflow/quilt/jep/QuiltPackage.groovy
index be5e19cb..7b6b5bb9 100644
--- a/plugins/nf-quilt/src/main/nextflow/quilt/jep/QuiltPackage.groovy
+++ b/plugins/nf-quilt/src/main/nextflow/quilt/jep/QuiltPackage.groovy
@@ -153,7 +153,7 @@ class QuiltPackage {
      */
     List<String> relativeChildren(String subpath) {
         Path subfolder = folder.resolve(subpath)
-        String base = subfolder.toString() + '/'
+        String base = subfolder.toString() + QuiltPath.osSep()
         List<String> result = []
         final String[] children = subfolder.list().sort()
         //log.debug("relativeChildren[${base}] $children")
diff --git a/plugins/nf-quilt/src/main/nextflow/quilt/nio/QuiltPath.groovy b/plugins/nf-quilt/src/main/nextflow/quilt/nio/QuiltPath.groovy
index a1b94650..4e5b69e0 100644
--- a/plugins/nf-quilt/src/main/nextflow/quilt/nio/QuiltPath.groovy
+++ b/plugins/nf-quilt/src/main/nextflow/quilt/nio/QuiltPath.groovy
@@ -46,8 +46,12 @@ final class QuiltPath implements Path, Comparable {
     private final String[] paths
     private final boolean isFileName
 
-    static String joinOs(String... parts) {
-        return parts.join(FileSystems.getDefault().getSeparator())
+    static String osSep() {
+        return FileSystems.getDefault().getSeparator()
+    }
+
+    static String osJoin(String... parts) {
+        return parts.join(osSep())
     }
 
     QuiltPath(QuiltFileSystem filesystem, QuiltParser parsed, boolean isFileName = false) {
@@ -219,7 +223,7 @@ final class QuiltPath implements Path, Comparable {
     Path relativize(Path other) {
         if (this == other) { return null }
         String file = (other in QuiltPath) ? ((QuiltPath)other).localPath() : other.toString()
-        String base = joinOs(pkg().toString(), parsed.getPath())
+        String base = osJoin(pkg().toString(), parsed.getPath())
         println("relativize[$base] in [$file]")
         int i = file.indexOf(base)
         if (i < 1) {