From be9240495ffc324ffca682f5859568d1fb41e3e1 Mon Sep 17 00:00:00 2001 From: TheoLaudatQM <98808790+TheoLaudatQM@users.noreply.github.com> Date: Tue, 10 Dec 2024 09:02:04 +0100 Subject: [PATCH] Make qualang-tools compatible with python 3.12 (#249) * update pyproject.toml to allow python 3.12 * support 3.12 * add tests for python 3.8, 3.12 * add per-python artifact * fix test command * update package name * update flake8 * update lock file * ignore E231 * Fix flake8 E226 errors * Remove E231 error * flake8 remaining fixes * Change flake8 to 5.0.4 to satisfy python 3.8 * Remove whitespace, ignore errors in flake8 * fix failing test due to differing numpy behaviour --------- Co-authored-by: Yoav Romach Co-authored-by: Serwan Asaad Co-authored-by: Serwan Asaad --- .flake8 | 2 +- .github/workflows/on-pull-request.yml | 21 +- CHANGELOG.md | 3 + examples/callable_from_qua/qua_print.py | 2 +- poetry.lock | 1068 +++++++++-------- pyproject.toml | 46 +- qualang_tools/addons/InteractivePlotLib.py | 10 +- .../addons/calibration/calibrations.py | 4 +- qualang_tools/bakery/bakery.py | 24 +- qualang_tools/config/primitive_components.py | 2 +- qualang_tools/digital_filters/filters.py | 2 +- qualang_tools/plot/fitting.py | 10 +- qualang_tools/results/results.py | 6 +- qualang_tools/simulator/simulator.py | 3 +- .../wirer/connectivity/channel_spec.py | 2 +- .../wirer/instruments/instrument_channels.py | 2 +- tests/data_handler/test_numpy_array_saver.py | 2 +- 17 files changed, 682 insertions(+), 527 deletions(-) diff --git a/.flake8 b/.flake8 index 73b43a40..ca65e4a6 100644 --- a/.flake8 +++ b/.flake8 @@ -1,7 +1,7 @@ [flake8] max-line-length = 88 select = C,E,F,W,B,B950 -ignore = E203, E501, W503, E741, B950, F405, F403 +ignore = E203, E501, W503, E741, B950, F405, F403, E231, E713, W604, E241, E221, E222, E225 exclude = **/tests/** per-file-ignores = qualang_tools/config/components.py:E743 diff --git a/.github/workflows/on-pull-request.yml b/.github/workflows/on-pull-request.yml index a4390276..3abd2088 100644 --- a/.github/workflows/on-pull-request.yml +++ b/.github/workflows/on-pull-request.yml @@ -5,11 +5,15 @@ jobs: env: JUNIT_REPORT_PATH: pytest-junit-report runs-on: ubuntu-latest + strategy: + matrix: + python-version: [3.8, 3.10.13, 3.12] steps: - uses: actions/checkout@v2 - - uses: actions/setup-python@v4 + - name: Set up Python ${{ matrix.python-version }} + uses: actions/setup-python@v4 with: - python-version: 3.10.13 + python-version: ${{ matrix.python-version }} - name: Setup pip Cache id: cache-pip @@ -43,8 +47,8 @@ jobs: - name: Check linting run: poetry run poe lint - - name: Test - run: poetry run poe test --junitxml=${JUNIT_REPORT_PATH}/report.xml + - name: Run tests + run: poetry run poe test --junitxml=test-results-${{ matrix.python-version }}.xml - name: Build run: poetry build @@ -66,10 +70,17 @@ jobs: with: files: ${{env.JUNIT_REPORT_PATH}}/*.xml + - name: Upload test results + if: always() + uses: actions/upload-artifact@v3 + with: + name: test-results-python-${{ matrix.python-version }} + path: test-results-${{ matrix.python-version }}.xml + - name: Upload dist uses: actions/upload-artifact@v4 with: - name: python_pkg + name: python_pkg_py${{ matrix.python-version }} path: | dist/*.tar.gz dist/*.whl diff --git a/CHANGELOG.md b/CHANGELOG.md index 04723b7e..5951f98d 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -4,6 +4,9 @@ All notable changes to this project will be documented in this file. The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/) ## [Unreleased] +### Added +- Support for Python 3.12 + ### Fixed - external_frameworks/qcodes - Fixed the driver to be compatible with qm-qua==1.2.1. diff --git a/examples/callable_from_qua/qua_print.py b/examples/callable_from_qua/qua_print.py index 5b2b01bd..ec3974c7 100644 --- a/examples/callable_from_qua/qua_print.py +++ b/examples/callable_from_qua/qua_print.py @@ -12,7 +12,7 @@ def qua_print(*args): text = "" for i in range(0, len(args) - 1, 2): - text += f"{args[i]} = {args[i+1]} | " + text += f"{args[i]} = {args[i + 1]} | " print(text) diff --git a/poetry.lock b/poetry.lock index 274e5942..8e73c313 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2,13 +2,13 @@ [[package]] name = "anyio" -version = "4.5.0" +version = "4.5.2" description = "High level compatibility layer for multiple asynchronous event loop implementations" optional = false python-versions = ">=3.8" files = [ - {file = "anyio-4.5.0-py3-none-any.whl", hash = "sha256:fdeb095b7cc5a5563175eedd926ec4ae55413bb4be5770c424af0ba46ccb4a78"}, - 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"ed127d93cdab63deccb2817c147b36cebee04abe96393d0e1a73f51da0d4f962" +python-versions = ">=3.8, <3.13" +content-hash = "e5e559bd4ab7e9e09188a5ddff5028addc51cd7e1ba1d16aa3063c3ec422a9ea" diff --git a/pyproject.toml b/pyproject.toml index f18952ac..31f7353f 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -4,32 +4,33 @@ version = "v0.18.1" description = "The qualang_tools package includes various tools related to QUA programs in Python" authors = ["Quantum Machines "] license = "BSD-3-Clause" -packages = [ - { include = "qualang_tools" } -] -include = [ -] -exclude = [ - "**/tests/**", -] +packages = [{ include = "qualang_tools" }] +include = [] +exclude = ["**/tests/**"] readme = "README.md" homepage = "https://github.com/qua-platform/py-qua-tools" [tool.poetry.dependencies] -python = ">=3.8,<3.12" +python = ">=3.8, <3.13" matplotlib = "^3.4.2" -numpy = "^1.17.0" -qm-qua = "^1.1.7" -scipy = "^1.7.1" +numpy = [ + { version = ">=1.17.0, <2", python = ">=3.8,<3.12" }, + { version = ">=1.26.0, <2", python = ">=3.12" }, +] +qm-qua = { version = ">=1.1.7", python = ">=3.8,<3.13" } +scipy = [ + { version = ">=1.7.1, <1.10.0", python = ">=3.8,<3.12" }, + { version = ">=1.11.0", python = ">=3.12" }, +] pandas = { version = ">=1.2.4", optional = true } dash = { version = "^2.0.0", optional = true } dash-html-components = { version = "^2.0.0", optional = true } dash-core-components = { version = "^2.0.0", optional = true } -dash-bootstrap-components = { version = "^1.0.0", optional = true } +dash-bootstrap-components = { version = "^1.6.0", optional = true, python = ">=3.8,<4" } dash-cytoscape = { version = "^0.3.0", optional = true } dash-table = { version = "^5.0.0", optional = true } dash-dangerously-set-inner-html = { version = "^0.0.2", optional = true } -docutils = { version = ">=0.14.0", optional = true } +docutils = { version = ">=0.14.0 <= 0.21", optional = true } waitress = { version = "^2.0.0", optional = true } dill = { version = "^0.3.4", optional = true } pypiwin32 = { version = "^223", optional = true } @@ -41,13 +42,24 @@ grpclib = "0.4.5" [tool.poetry.dev-dependencies] pytest = "^6.2.5" black = "^24.3" -poethepoet = "^0.11.0" -flake8 = "^4.0.1" +poethepoet = "^0.18.0" +flake8 = "^5.0.4" setuptools = "^69.0.2" [tool.poetry.extras] interplot = ["dill", "pypiwin32", "ipython"] -configbuilder = ["pandas", "dash", "dash-html-components", "dash-core-components", "dash-bootstrap-components", "dash-cytoscape", "dash-table", "dash-dangerously-set-inner-html", "docutils", "waitress"] +configbuilder = [ + "pandas", + "dash", + "dash-html-components", + "dash-core-components", + "dash-bootstrap-components", + "dash-cytoscape", + "dash-table", + "dash-dangerously-set-inner-html", + "docutils", + "waitress", +] datahandler = ["xarray", "netcdf4"] [tool.black] diff --git a/qualang_tools/addons/InteractivePlotLib.py b/qualang_tools/addons/InteractivePlotLib.py index 2e192153..b1de409c 100644 --- a/qualang_tools/addons/InteractivePlotLib.py +++ b/qualang_tools/addons/InteractivePlotLib.py @@ -494,7 +494,7 @@ def predefined_fit(self, req="g"): "initial_guess": [omega, 1, 1, 0], "func": "sin*exp", "y_scale": y_extra_scale, - "text": lambda a: f"f = {a[0]/(2*np.pi)} [Hz]\n tau = {1/a[1]} [s]\n amp = {a[2]*y_extra_scale}\n y_offset={a[3]*y_extra_scale}", + "text": lambda a: f"f = {a[0] / (2 * np.pi)} [Hz]\n tau = {1 / a[1]} [s]\n amp = {a[2] * y_extra_scale}\n y_offset={a[3] * y_extra_scale}", }, ) else: @@ -1876,7 +1876,7 @@ def __init__(self, fit_type=1, ax=[], options={}): ax = plt.gca() self.ax = ax lines = self.ax.get_lines() - if type(fit_type) == int: + if type(fit_type) is int: self.res = { "fit_type": [], "fit_func": [], @@ -1935,7 +1935,7 @@ def __init__(self, fit_type=1, ax=[], options={}): self.res["x"].append(single_fit.x) self.res["y"].append(single_fit.y) self.res["yf"].append(single_fit.yf) - if type(fit_type) == int: + if type(fit_type) is int: self.res["p"].append(single_fit.p) self.res["y0"].append(single_fit.y0) self.res["x0"].append(single_fit.x0) @@ -2005,7 +2005,7 @@ def __init__(self, line, fit_type=1, ax=[], options={}): y_data / y_scale, options["initial_guess"], ) - print(f"func = { options ['func'] }, a = {popt}") + print(f"func = {options['func']}, a = {popt}") self.fit_func = lambda x: fit_type(x / x_scale, popt) * y_scale (l,) = plt.plot(x_data, self.fit_func(x_data), "m", linewidth=2) self.fit_line_obj = l @@ -2023,7 +2023,7 @@ def __init__(self, line, fit_type=1, ax=[], options={}): else: pass - elif type(fit_type) == int: + elif type(fit_type) is int: self.ok = self.fit_polygon(line, options) else: diff --git a/qualang_tools/addons/calibration/calibrations.py b/qualang_tools/addons/calibration/calibrations.py index 52f9370f..730bf8a9 100644 --- a/qualang_tools/addons/calibration/calibrations.py +++ b/qualang_tools/addons/calibration/calibrations.py @@ -1074,7 +1074,7 @@ def _time_of_flight(self, plot=False): plt.plot( adc1, "b", - label=f"TOF to add: {tof1} ns and offset to remove: {np.mean(adc1[:tof1])*1000:.4f} mV", + label=f"TOF to add: {tof1} ns and offset to remove: {np.mean(adc1[:tof1]) * 1000:.4f} mV", ) if tof1 is not None: plt.axvline(x=tof1, color="b", linestyle=":") @@ -1083,7 +1083,7 @@ def _time_of_flight(self, plot=False): plt.plot( adc2, "r", - label=f"TOF to add: {tof2} ns and offset to remove: {np.mean(adc2[:tof2])*1000:.4f} mV", + label=f"TOF to add: {tof2} ns and offset to remove: {np.mean(adc2[:tof2]) * 1000:.4f} mV", ) if tof2 is not None: plt.axvline(x=tof2, color="r", linestyle=":") diff --git a/qualang_tools/bakery/bakery.py b/qualang_tools/bakery/bakery.py index e53ac8f9..9b217566 100644 --- a/qualang_tools/bakery/bakery.py +++ b/qualang_tools/bakery/bakery.py @@ -676,7 +676,7 @@ def add_op( elif "singleInput" in self._local_config["elements"][qe]: for i in range(len(samples)): assert ( - type(samples[i]) == float or type(samples[i]) == int + type(samples[i]) is float or type(samples[i]) is int ), f"{qe} is a singleInput element, list of numbers (int or float) should be provided " pulse = { @@ -740,10 +740,10 @@ def play(self, Op: str, qe: str, amp: Union[float, Tuple[float]] = 1.0) -> None: Q3 = [None] * len(Q) for i in range(len(I)): - if type(amp) == float or type(amp) == int: + if type(amp) is float or type(amp) is int: I2[i] = amp * I[i] Q2[i] = amp * Q[i] - elif len(amp) != 4 or type(amp) != tuple: + elif len(amp) != 4 or type(amp) is not tuple: raise IndexError("Amplitudes provided must be stored in a tuple (v00, v01, v10, v11)") else: I2[i] = amp[0] * I[i] + amp[1] * Q[i] @@ -757,7 +757,7 @@ def play(self, Op: str, qe: str, amp: Union[float, Tuple[float]] = 1.0) -> None: elif "singleInput" in self._local_config["elements"][qe]: for i in range(len(samples)): assert ( - type(samples[i]) == float or type(samples[i]) == int + type(samples[i]) is float or type(samples[i]) is int ), f"{qe} is a singleInput element, list of numbers (int or float) should be provided " self._samples_dict[qe]["single"].append(amp * np.cos(freq * i * 1e-9 + phi) * samples[i]) self._update_qe_time(qe, len(samples)) @@ -793,8 +793,8 @@ def play_at(self, Op: str, qe: str, t: int, amp: Union[float, Tuple[float]] = 1. """ freq = self._qe_dict[qe]["freq"] phi = self._qe_dict[qe]["phase"] - if type(t) != int: - if type(t) == float: + if type(t) is not int: + if type(t) is float: t = int(t) else: raise TypeError("Provided time is not an integer") @@ -830,11 +830,11 @@ def play_at(self, Op: str, qe: str, t: int, amp: Union[float, Tuple[float]] = 1. [None] * len(I), ) for i in range(len(I)): - if type(amp) == float or type(amp) == int: + if type(amp) is float or type(amp) is int: I2[i] = amp * I[i] Q2[i] = amp * Q[i] else: - if len(amp) != 4 or type(amp) != tuple: + if len(amp) != 4 or type(amp) is not tuple: raise IndexError("Amplitudes provided must be stored in a tuple (v00, v01, v10, v11)") else: I2[i] = amp[0] * I[i] + amp[1] * Q[i] @@ -860,12 +860,12 @@ def play_at(self, Op: str, qe: str, t: int, amp: Union[float, Tuple[float]] = 1. new_samples += 1 elif "singleInput" in self._local_config["elements"][qe]: - if type(amp) != float and type(amp) != int: + if type(amp) is not float and type(amp) is not int: raise IndexError("Amplitude must be a number") for i in range(len(samples)): assert ( - type(samples[i]) == float or type(samples[i]) == int + type(samples[i]) is float or type(samples[i]) is int ), f"{qe} is a singleInput element, list of numbers (int or float) should be provided " if t + i < len(self._samples_dict[qe]["single"]): self._samples_dict[qe]["single"][t + i] += ( @@ -1053,7 +1053,7 @@ def run( else: index2 = list(zip(*amp_array))[0].index(qe) amp = list(zip(*amp_array))[1][index2] - if type(amp) == list: + if type(amp) is list: raise TypeError("Amplitude can only be a number (either Python or QUA variable)") qua.play(f"baked_Op_{self._ctr}" * qua.amp(amp), qe) @@ -1073,7 +1073,7 @@ def run( else: index2 = list(zip(*amp_array))[0].index(qe) amp = list(zip(*amp_array))[1][index2] - if type(amp) == list: + if type(amp) is list: raise TypeError("Amplitude can only be a number (either Python or QUA variable)") qua.play(f"baked_Op_{self._ctr}" * qua.amp(amp), qe, truncate=trunc) diff --git a/qualang_tools/config/primitive_components.py b/qualang_tools/config/primitive_components.py index 18a028de..e03e1a5e 100644 --- a/qualang_tools/config/primitive_components.py +++ b/qualang_tools/config/primitive_components.py @@ -28,7 +28,7 @@ def info(self): return self.controller, self.port_id def __eq__(self, other) -> bool: - return self.info == other.info and type(self) == type(other) + return self.info == other.info and type(self) is type(other) def __str__(self): cont, port_id = self.info diff --git a/qualang_tools/digital_filters/filters.py b/qualang_tools/digital_filters/filters.py index e5fe0031..99d4dad1 100644 --- a/qualang_tools/digital_filters/filters.py +++ b/qualang_tools/digital_filters/filters.py @@ -333,7 +333,7 @@ def _warning_on_one_line(message, category, filename, lineno, file=None, line=No f"The feedforward taps reached the maximum value of {qop_version.value['feedforward_max']}.\n" f"The coefficients are scaled down to stay within the valid range which reduces the outputted amplitude of" f" the pulses played through the filtered port by a factor of " - f"{max_value/qop_version.value['feedforward_max']:.3f}." + f"{max_value / qop_version.value['feedforward_max']:.3f}." ) return list(feedforward_taps), list(feedback_taps) diff --git a/qualang_tools/plot/fitting.py b/qualang_tools/plot/fitting.py index f894f2fa..9868096d 100644 --- a/qualang_tools/plot/fitting.py +++ b/qualang_tools/plot/fitting.py @@ -119,7 +119,7 @@ def fit_type(x_var, a): x_data, y_data, ".", - label=f"a = {out['a'][0]:.1f} +/- {out['a'][1]:.1f} \n b = {out['b'][0]:.1f} +/- {out['b'][1]:.1f}", + label=f"a = {out['a'][0]:.1f} +/- {out['a'][1]:.1f} \n b = {out['b'][0]:.1f} +/- {out['b'][1]:.1f}", ) plt.legend(loc="upper right") # Save the data in a json file named 'id.json' if save=id @@ -246,7 +246,7 @@ def fit_type(x_var, a): x_data, y_data, ".", - label=f"T1 = {out['T1'][0]:.1f} +/- {out['T1'][1]:.1f} {time_unit}", + label=f"T1 = {out['T1'][0]:.1f} +/- {out['T1'][1]:.1f} {time_unit}", ) plt.legend(loc="upper right") # Save the data in a json file named 'id.json' if save=id @@ -428,7 +428,7 @@ def fit_type(x_var, a): x_data, y_data, ".", - label=f"T2 = {out['T2'][0]:.1f} +/- {out['T2'][1]:.1f}ns \n f = {out['f'][0] * 1000:.3f} +/- {out['f'][1] * 1000:.3f} MHz", + label=f"T2 = {out['T2'][0]:.1f} +/- {out['T2'][1]:.1f}ns \n f = {out['f'][0] * 1000:.3f} +/- {out['f'][1] * 1000:.3f} MHz", ) plt.legend(loc="upper right") # Save the data in a json file named 'id.json' if save=id @@ -578,7 +578,7 @@ def fit_type(x_var, a): x_data, y_data, ".", - label=f"f = {out['f'][0]:.1f} +/- {out['f'][1]:.1f} {freq_unit}", + label=f"f = {out['f'][0]:.1f} +/- {out['f'][1]:.1f} {freq_unit}", ) plt.xlabel(f"Frequency {freq_unit}") plt.legend(loc="upper right") @@ -751,7 +751,7 @@ def fit_type(x_var, a): x_data, y_data, ".", - label=f"f = {out['f'][0]:.1f} +/- {out['f'][1]:.1f} {freq_unit}", + label=f"f = {out['f'][0]:.1f} +/- {out['f'][1]:.1f} {freq_unit}", ) plt.legend(loc="upper right") # Save the data in a json file named 'id.json' if save=id diff --git a/qualang_tools/results/results.py b/qualang_tools/results/results.py index d7ce3523..4e1cb17c 100644 --- a/qualang_tools/results/results.py +++ b/qualang_tools/results/results.py @@ -59,8 +59,8 @@ def is_processing(self): return self._b_cont or self._b_last def _format(self, data): - if type(data) == np.ndarray: - if type(data[0]) == np.void: + if type(data) is np.ndarray: + if type(data[0]) is np.void: if len(data.dtype) == 1: data = data["value"] return data @@ -114,7 +114,7 @@ def progress_counter(iteration, total, progress_bar=True, percent=True, start_ti if percent: progress += f"{current_percent:.1f}% (n={iteration + 1}/{total})" if start_time is not None: - progress += f" --> elapsed time: {time.time()-start_time:.2f}s" + progress += f" --> elapsed time: {time.time() - start_time:.2f}s" print(progress, end="\r") if current_percent == 100: diff --git a/qualang_tools/simulator/simulator.py b/qualang_tools/simulator/simulator.py index e29d9069..504f176e 100644 --- a/qualang_tools/simulator/simulator.py +++ b/qualang_tools/simulator/simulator.py @@ -41,7 +41,8 @@ def create_simulator_controller_connections( if i + 1 in actual_controllers and j + 1 in actual_controllers: controller_connections.append( ControllerConnection( - InterOpxChannel(f"con{i+1}", first_con_port), InterOpxChannel(f"con{j+1}", second_con_port) + InterOpxChannel(f"con{i + 1}", first_con_port), + InterOpxChannel(f"con{j + 1}", second_con_port), ) ) if print_debug: diff --git a/qualang_tools/wirer/connectivity/channel_spec.py b/qualang_tools/wirer/connectivity/channel_spec.py index 8d532789..a77f42fb 100644 --- a/qualang_tools/wirer/connectivity/channel_spec.py +++ b/qualang_tools/wirer/connectivity/channel_spec.py @@ -66,7 +66,7 @@ def apply_constraints(self, constraints: "ChannelSpec") -> bool: if template in constrained_templates: # can't constrain already constrained spec continue - if type(template) != type(constraint): + if type(template) is not type(constraint): # can't constrain a spec of a different type continue else: diff --git a/qualang_tools/wirer/instruments/instrument_channels.py b/qualang_tools/wirer/instruments/instrument_channels.py index 6787f30a..098abd6a 100644 --- a/qualang_tools/wirer/instruments/instrument_channels.py +++ b/qualang_tools/wirer/instruments/instrument_channels.py @@ -52,7 +52,7 @@ def check_if_already_occupied(self, channel: AnyInstrumentChannel): and channel.signal_type == existing_channel.signal_type ): if channel.slot is None: - if type(channel) != type(existing_channel): + if type(channel) is not type(existing_channel): pass else: raise ValueError( diff --git a/tests/data_handler/test_numpy_array_saver.py b/tests/data_handler/test_numpy_array_saver.py index 443fbcb0..03bbe1b4 100644 --- a/tests/data_handler/test_numpy_array_saver.py +++ b/tests/data_handler/test_numpy_array_saver.py @@ -11,7 +11,7 @@ def dicts_equal(d1, d2): if isinstance(d1[key], dict): if not dicts_equal(d1[key], d2[key]): return False - elif isinstance(d1[key], np.ndarray): + elif isinstance(d1[key], np.ndarray) or isinstance(d2[key], np.ndarray): if not np.array_equal(d1[key], d2[key]): return False else: