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Hyphens in metadata column names passed to ancombc's --p-formula being interpreted as formulaically meaningful #129

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colinvwood opened this issue Oct 30, 2023 · 1 comment
Closed

Hyphens in metadata column names passed to ancombc's --p-formula being interpreted as formulaically meaningful #129

colinvwood opened this issue Oct 30, 2023 · 1 comment
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bug-sev:3|medium

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@colinvwood
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colinvwood commented Oct 30, 2023 •
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It seems that when a user specifies a metadata column name that contains hyphens, e.g. my-column to the --p-formula option to qiime composition ancombc, the hyphens are interpreted as mathematical symbols and one term becomes two: my and column. Then the metadata key errors on my. This is happening here.

See forum post here.
@lizgehret
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Hey @colinvwood just FYI there's already an open issue on this: #100

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@lizgehret @colinvwood