diff --git a/CMakeLists.txt b/CMakeLists.txt
index 76db7ba..e4a0545 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -1,5 +1,5 @@
 cmake_minimum_required(VERSION 3.12 FATAL_ERROR)
-project(ThDy_DNAHybrid VERSION      0.02.00
+project(ThDy_DNAHybrid VERSION      0.02.02
         DESCRIPTION "Thermo Dynamic DNA Hybridizations"
         HOMEPAGE_URL https://github.com/qPCR4vir/ThDySec
         LANGUAGES CXX         )
@@ -9,8 +9,8 @@ project(ThDy_DNAHybrid VERSION      0.02.00
 add_executable(   ThDy_DNAHybrid)
 
 target_include_directories(ThDy_DNAHybrid PUBLIC include)
-target_compile_features   (ThDy_DNAHybrid PUBLIC cxx_std_17)
-target_sources            (ThDy_DNAHybrid PRIVATE
+#target_compile_features   (ThDy_DNAHybrid PUBLIC cxx_std_17)
+target_sources (ThDy_DNAHybrid PRIVATE
         src/ThDySec/cod_deg.cpp
         src/ThDySec/sec.cpp
         src/ThDySec/sec_basic.cpp
@@ -35,7 +35,8 @@ target_sources            (ThDy_DNAHybrid PRIVATE
         src/ThDy_DNAHybrid.Nana/uArray.cpp)
 
 
-add_subdirectory(../ExtLib/nana.ext  ../ExtLib/cmake-nana_ext-build-${CMAKE_BUILD_TYPE} )
+add_subdirectory(../ExtLib/nana.ext  ../ExtLib/cmake-nana_ext-build-${CMAKE_BUILD_TYPE}
+                 EXCLUDE_FROM_ALL )
 target_link_libraries(ThDy_DNAHybrid PRIVATE nana_ext )
 
 
diff --git a/ThDy/sequences/Virus/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu - serogroup -S.711.nt 140-420.export alignment.fasta b/ThDy/sequences/Virus/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu - serogroup -S.711.nt 140-420.export alignment.fasta
new file mode 100644
index 0000000..be56700
--- /dev/null
+++ b/ThDy/sequences/Virus/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu - serogroup -S.711.nt 140-420.export alignment.fasta	
@@ -0,0 +1,845 @@
+>NC_043562 SeroGr:Simbu Clade:- specie:Leanyer subspc:Leanyer Leanyer virus isolate AusN16701 segment S, complete sequence
+CTTTATCTATGATGATAGACCTGCAGCAGTCTCAAGC-ACATTTAATCCTGAAAAAGGATACATGGATTTTATCACTGCA
+TACGGAAAGAAC---ATCAATGCAGATAATGTTAGGATCTTCTTTCTTAATCACAAGAAGGCCAAGGATTCTCTCAAGGG
+-TTCACCTAAGGTCGAGGTCGACCTTCAATTTGGAACTCTCAGA--GTCAAGGTTGTTAATAACCATAATCCACGCAACA
+GGGACAACCCTGTTGCAGACAATGCCATTACAC
+>NC_043598 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Buttonwillow Buttonwillow virus isolate BFS 5002 nucleocapsid protein gene, complete cds
+GTTCATCTTTAATGATGTACCT-CAACGGTCTACATCCACGTTTGACCCGGAGGCAGCATATGTGGCATTTGAAGCTCAG
+TACAG--AGCAAGC-CTCAGCGTTAGTGTCGCTAGAATTTTCTTCCTCAACCAGAAGAAGGCCAAGGATCGTC-TACGTC
+AGACGTCACAACCAAATGTCAATCTTACTTTTGGCCAG-TC-AGTCTTTCCAGTGGTTAATAACCATTTTCCACAATTCC
+AGTCAAATCCGGTGCCAGATAACGGTCTTACCC
+>MH507153 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Cat Que Cat Que virus strain JM1 segment S, complete sequence
+GATAGTTTTCAATGATGTACCT-CAGCGGGCTCAATCTACGTTTGATCCGGAGGCACAATATGTGGCATTTGAAAATACA
+TACAGAGCAAAC---CTCACTGTTAACACCGCTCGAGTTTTCTTCCTCAATCAGAAGAGAGCCAAAGATACTC-TACGTC
+AGACGCCGAGGCCCAATGTTAATCTTACTTTTGGACAGTGCACA--TTTCCAGTGGTTAATAACCATTTTCCACAATTCC
+AATCGAATCCGGTTAACGATACAGCCCTTACCT
+>JQ675600 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Cat Que Cat Que Virus strain VN04-2108 nucleoprotein gene, complete cds
+GATAGTTTTCAATGATGTACCT-CAGCGGGCTCAATCTACGTTTGATCCGGAGGCACAATATGTGGCATTTGAAAATACA
+TACAGGGCAAAC---CTCACTGTTAACACCGCTCGAGTTTTCTTCCTCAATCAGAAGAGAGCCAAAGATACT-TTACGTC
+AGACGCCGAGGCCCAATGTTAATCTTACTTTTGGACAGTGCACA--TTTCCAGTGGTTAATAACCATTTTCCACAATTCC
+AATCGAATCCGGTTAACGATACAGCCCTTACCT
+>NC_043590 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Ingwavuma Ingwavuma virus isolate SA An 4165 nucleocapsid protein gene, complete cds
+GATAGTTTTCAATGATGTACCT-CAACGGACTCAATCTACGTTTGATCCGGAGGCACAATATGTGGTATTTGAAAATACA
+TACCGAGCAAAC---CTCACTGTTAACACCGCTCGAATTTTCTTCCTCAATCAGAAGAGAGCCAAGGATACT-TTACGTC
+AGACGCCGAGGCCCACTGTCAATCTTACTTTTGGACAGTGCACA--TTTCCAGTGGTTAATAACCATTATCCACAATTCC
+AATCAAATCCGGTTGATGATTCAGCCCTTACCC
+>KF697148 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Manzanilla Manzanilla virus isolate TRVL 3586 nucleocapsid protein gene, complete cds
+GATAGTTTTCAATGATGTACCT-CAACGGGCTCAATCTACGTTTGATCCGGAGGCACAATATGTGGTATTTGAAAATACA
+TACCGAGCAAAC---CTCACTATTAACACCGCTAGAATATTCTTCCTCAATCAGAAGAGAGCCAAAGATACT-TTACGTC
+AGACGCCGAGGCCCACTGTCAATCTTACTTTTGGACAGTGTACA--TTTCCAGTGGTTAATAACCATTTCCCACAATTCC
+AGTCAAATCCGGTTAGTGATACAGCCCTTACCT
+>KP016014 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Manzanilla Manzanilla virus strain DHL10M107 segment S nucleoprotein gene, complete cds
+GATAGTTTTCAACGATGTACCT-CAGCGGGCTCAATCTACGTTTGATCCGGAGGCACAATATGTGGCATTTGAAAATACA
+TACAGGGCAAAC---CTCACTGTTAACACCGCTCGAGTTTTCTTCCTCAATCAGAAGAGAGCCAAAGATACT-TTACGTC
+AGACGCCGAGGCCCAATGTTAATCTTACTTTTGGACAGTGCACA--TTTCCAGTGGTTAATAACCATTTTCCACAATTCC
+AGTCGAATCCGGTTAACGATACAGCCCTTACCT
+>NC_043593 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Mermet Mermet virus isolate AV 782 nucleocapsid protein gene, complete cds
+GATAGTTTTCAACGATGTACCT-CAACGGGCTCAATCTACGTTTGATCCGGAGGCACAATATGTGGTATTTGAAAATACA
+TACCGAGCAAAC---CTCACTATTAACACCGCTCGAATTTTCTTCCTCAATCAGAAGAGAGCCAAGGATACT-TTACGTC
+AGACGCCGAGGCCTACTGTCAATCTTACTTTTGGACAGTGTACA--TTTCCAGTGGTTAATAACCATTTTCCACAGTTCC
+AATCAAATCCGGTTGCAGATACAGCCCTTACCC
+>AB075611 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Oya Oya virus gene for Nucleoprotein, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------------------------GCCAAAGATACT-TTACGTC
+AGACGCCGAGGCCCAATGTTAATCTTACTTTTGGACAGTGCACA--TTTCCAGTGGTTAATAACCATTATCCACAATTCC
+AATCGAATCCGGTTAACGATACAGCCCTTACCC
+>KF697136 SeroGr:Simbu Clade:A specie:Oropouche subspc:Facey's Paddock Facey's Paddock virus isolate Aus Ch 16129 nucleocapsid protein gene, complete cds
+CTTTGTGTTCAACGATGTACCA-CAACGGGCTACGTCTACGTTTGATCCGGAGGCGGCATATGTGGCATTTGAAAATCGT
+TTCAGAGCGAAT---CTCACTGTTGATGTCGCTCGAATTTTCTTCCTCAACCAGAAGAAGGCCAAGGATCGTCTTGC-TA
+AGACGGCGAGAGCAACTGTTGATATTACGTTTGGAGGGGTCGTC--TTTCCAGTGGTTAACAACCATTATCCAGAATACC
+AACGGAATCCGGTGCCAGATGACGGCCTTACCT
+>KF697144 SeroGr:Simbu Clade:A specie:Oropouche subspc:Iquitos Iquitos virus isolate IQT9924 nucleocapsid protein gene, complete cds
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>KF150522 SeroGr:Simbu Clade:A specie:Oropouche subspc:Iquitos Iquitos virus strain IQE1005/PER/05 nucleoprotein gene, partial cds
+GTTCATTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGCGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>KJ866386 SeroGr:Simbu Clade:A specie:Oropouche subspc:Iquitos Iquitos virus strain MIS-0397 nucleocapsid protein and nonstructural protein genes, complete cds
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGCGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCAAATCCAGTGCCGGACAACGGTCTTACCC
+>NC_043576 SeroGr:Simbu Clade:A specie:Oropouche subspc:Jatobal Jatobal virus nucleocapsid protein and nonstructural protein genes, complete cds
+ATTCGTTTTCAATGATGTACCA-CAAAGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAAA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAGGAT-GTCTTACGTA
+AGACGTCGCGGCCCATGGTTGAACTTACTTTTGGAGGGGTTAAA--TTTACAATGGTTAATAACCATTTCCCACAATTCC
+AGGCAAATCCGGTGCCAGACAACGGTCTTACCT
+>KF697146 SeroGr:Simbu Clade:A specie:Oropouche subspc:Madre Madre de Dios virus isolate FMD 1303 nucleocapsid protein gene, complete cds
+GTTCATTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGGC---CAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAAAAGGCCAAAGAT-GTCTTACGTA
+AGACGTCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTGCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCAAATCCAGTGCCGGACAACGGTCTTACCT
+>MG100826 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche like virus isolate A12 nucleocapsid gene, partial cds
+--------------------------------------------------------------------------------
+-----------------------TGGTGTTGCTAGAGTCTTCTTCTCCCACCAAAAGATGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MG100825 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche like virus isolate A4 nucleocapsid gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------GTTGTAGTAGTCCTCC---GGCACGGTATGGCCAAAGACTG-CCTACGTG
+AGCAATGGATGCGTGAACTAGAAGTTGCTGTAAGTGAGATCCAA--TTTGCAATGGTTAATAACCAATTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MK643115 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche orthobunyavirus strain FCT00025/COL/2018 nucleoprotein (N) and nonstructural protein (NS) genes, complete cds
+GTTCATTTTCAACGATGTACCW-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACGTCGCGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AATCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MF620127 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus culture NCPV:1409261v segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAAGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AATCGAATCCAGTGCCGGACAACGGTCTTACCT
+>HM107840 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate AMLq13 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------GTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>HQ830448 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate AR366927 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GTTCTTTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCCAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCCAATCCAGTGCCGGACAACGGTCTTACCT
+>MF155931 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BA/BR/UFBA/LabViro/01 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------CAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MG747521 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAn 626990 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTAGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>MG747524 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAr 19886 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAAGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCCAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCCAATCCAGTGCCGGACAACGGTCTTACCC
+>MG747533 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 121923 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTTCATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTTGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGTGGCCCATGGTTGACCTTACTTTTGGTCGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTGCCC
+>MG747527 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 29086 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTTCATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGG
+TACGG---ACAAGTGCTCAATGCTTGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGTGGCCCATGGTCGACCTTACTTTTGGTCGGGTGCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTGCCC
+>MG747548 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 355173 segment S, complete sequence
+GTTCTTTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGG
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTCAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGACCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>MG747554 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 385591 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCCGCATATGTGTCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTCGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAGGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTCCCGGACAACGGTCTTACCC
+>MG747506 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 389865 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTCCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAGGAT-GTCTTACGAA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTGCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MG747518 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 421086 segment S, complete sequence
+GTTCCTTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAATCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAGGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTACAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MG747515 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 472435 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCTTATGTGTCATTTGAAGCTAGG
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGGGTCTTCTTCCTTAACCAAAAGAAGGCCAAGGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTCACTTTTGGTGGGGTCCAA--TTTGCAATGGTCAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTCCCGGACAACGGTCTTACCC
+>MG747602 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 498913 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGG
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGACCCATGGTTGACCTTACTTTTAGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>MG747605 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 505768 segment S, complete sequence
+GTTCTTTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGACCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>MG747557 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 532314 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGTCATTTGAAGCGAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAGGAT-GTCTTACGGA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTCAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MG747560 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 532422 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGTCCTTTGAAGCGAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAGGAT-GTCTTACGGA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTCAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MG747563 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 532490 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCCGCATATGTGTCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTCGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAGGAT-GTCTTACGTA
+AGACATCGAGCCCCATGGTTGACCTCACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTCCCGGACAACGGTCTTACCC
+>MG747566 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 532500 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCCGCATATGTCTCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTCGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAGGAT-GTCTTACGCA
+AGACATCGAGGCCCATGGTTGACCTCACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTCCCGGACAACGGTCTTACCC
+>MG747503 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 543100 segment S, complete sequence
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGACCCATGGTTGACCTTACTTTTAGTGGGGTTCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>MG747572 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 543629 segment S, complete sequence
+GTTCCTTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAGGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MG747578 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 543857 segment S, complete sequence
+GTTCCTTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MG747596 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 707287 segment S, complete sequence
+ATTCATTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>MG747599 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 708717 segment S, complete sequence
+ATTCATTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTCACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCCAATCCAGTGCCGGACAACGGTCTTACCT
+>KP691632 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH759146 segment S, complete sequence
+GTTCATTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>HQ830444 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H244576 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GTTCTTTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTCCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCCAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>HQ830447 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H356898 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCCGCATATGTGTCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTCGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAGGAT-GTCTTACGGA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCCAATCCAGTCCCGGACAACGGTCTTACCC
+>HQ830449 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H366781 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCCGCATATGTGTCATTTGAAGCTAGG
+TACGG---ACAAGTGCTCAATGCTGGTGTCGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAGGAT-GTCTTACGCA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTCCCGGACAACGGTCTTACCC
+>HQ830450 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H384192 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCTTATGTGTCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGGGTCTTCTTCCTTAACCAAAAGAAGGCCAAGGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTCACTTTTGGTGGGGTCCAA--TTTGCAATGGTCAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>HQ830458 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H505764 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGG
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAAGAT-GTCTTACGCA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTAGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>HQ830468 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H543638 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GTTCCTTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAGAAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>HQ830473 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H706890 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+ATTCATTTTCAATGATGTACCA-CAACGCACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTCAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCCAATCCAGTGCCGGACAACGGTCTTACCT
+>HQ830479 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H758669 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GTTCATTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATACTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>HQ830486 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759018 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GTTCATTTTCAATGATGTACCA-CAACGGACCACCTCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>HQ830480 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759525 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GTTCATTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAAGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAGGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>HQ830482 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759531 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GTTCATTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAGGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAG--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>KP347671 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate OROV/MT_CbaH282/2012 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------GGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTGGAATCCAGTGCCGGACAACGGTCTTACCC
+>KP347673 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate OROV/MT_NMH470/2012 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------AATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MG747581 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate PPS 522 H 669314 segment S, complete sequence
+GTTCATTTCCAACGATGTACCA-CATCGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>EF467368 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH 622544 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+GTTCATTTTCAGCGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAGGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>AF164534 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH379693 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+GGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>AF164547 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH543087 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGTCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTTAACCAAAAGAAGGCCAAGGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>EU561644 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BR/2004/Acre27 nucleocapsid protein (N) gene, partial cds
+---------------------------------------------------------------------TTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCCTACCC
+>AF164552 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain IQT4083 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GTTTATTTTCAATGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAATTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCT
+>KP310501 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV/MT_CbaAR1256/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------TGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>KP310506 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV/MT_CbaAR632/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------TATAGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTGGAATCCAGTGCCGGACAACGGTATTACCC
+>KP310507 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV/MT_CbaAR833/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------------------------GTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MH337272 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV_BR/MT_CbaH_1248/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------ATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>MH337271 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV_BR/MT_CbaH_1251/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------TTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>KP795083 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TVP-19254/GML-480914 structural nucleocapsid protein and non-structural protein genes, complete cds
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAGTGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGAGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTGCAATGGTTAATAACCATTTCCCACAGTTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>KP795086 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TVP-19256/IQE-7894 structural nucleocapsid protein and non-structural protein genes, complete cds
+GTTCATTTTCAACGATGTACCA-CAACGGACTACATCTACATTTGATCCGGAGGCAGCATATGTGGCATTTGAAGCTAGA
+TACGG---ACAAGTGCTCAATGCTGGTGTTGTTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAAGAT-GTCTTACGTA
+AGACATCGCGGCCCATGGTTGACCTTACTTTTGGTGGGGTCCAA--TTTACAATGGTTAATAACCATTTCCCACAATTCC
+AGTCGAATCCAGTGCCGGACAACGGTCTTACCC
+>NC_043596 SeroGr:Simbu Clade:A specie:Oropouche subspc:Utinga Utinga virus isolate Be An 84785 nucleocapsid protein gene, complete cds
+ATTTGTATTTAATGATGTCCCC-CAGAGGTCTACATCAACATTTGACCCAGAGGTGGCCTATGCTACTTTTGAAGCAGCA
+TTTCGC---CAGACTCTAAATGTCAATGTTGTTAGAGTGTTCTTTTTAAACCAAAAGAATGCTAAAAAT-GTTTTGAGAA
+AAACCTCAAGACCAAATGTGGACTTGACATTTG--GGGGTGCAACCTTTCCAATTGTCAACAACCATTTTCCTCAATTTC
+AATCAAATCCAGTCCCTGACAACGGACTCACTC
+>KF697158 SeroGr:Simbu Clade:A specie:Oropouche subspc:Utive Utive virus isolate Pan An 48878 nucleocapsid protein gene, complete cds
+ATTTGTATTCAATGATGTCCCC-CAGAGGTCTACATCAACATTTGACCCAGAGGTGGCCTATGCTACTTTTGAAGCAGCA
+TTTCGC---CAGACTCTAAATGTCAATGTTGTTAGAGTGTTCTTTTTAAACCAAAAGAATGCTAAAAAT-GTTTTGAGAA
+AAACCTCAAGACCAAATGTGGATTTGACATTTG--GGGGTGCAACCTTTCCAATTGTCAACAACCATTTTCCTCAATTTC
+AATCAAATCCAGTCCCTGATAATGGGCTCACTC
+>MH999470 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane orthobunyavirus strain Akabane#2Vero#3BHK_22:05:98 nucleocapsid protein gene, partial cds; and NSs gene, complete cds
+-------TTTCACGATGTTCCA-CAACGGAATGCAGCTACATTTAACCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+CATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCGGTGTCAGACACTGCCTTTACGC
+>MH999469 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane orthobunyavirus strain Cu170#1Vero_21:07:94 nucleocapsid protein and NSs genes, complete cds
+ATTTATCTTTGATGATGTTCCA-CAACGGAATGCAGCTACATTTAACCCGGACACGGGGTATGTGGCGTTTATCAGTAAG
+TATGGGCAACAT---CTCAACTTCACTGTTGCTCGAGTCTTCTTCCTCAACCAAAAGAAGGCCAAA-ATGGTCTTACATA
+AGACGGCACAACCAAGTGTCGACCTTACTTTTGGTGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAATACA
+TTGCAAATCCTGTGCCAGACACTGCCCTTACAC
+>AB244090 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus gene for nucleocapsid, partial cds, strain: Okayama 2001
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCAGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CTGCAAATCCGGTGTCAGACACTGCCTTTACGC
+>AB289321 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus genomic RNA, segment S, complete sequence, strain: Iriki
+ATTCATTTTCAATGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>AB289320 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus genomic RNA, segment S, complete sequence, strain: Okayama2004
+ATTCATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>MF278876 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate 13H22 nulecoprotein (NP) gene, complete cds
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CTGCAAATCCGGTGTCAGACACTGCCTTTACAC
+>MF278877 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate 93H78 nulecoprotein (NP) gene, complete cds
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>KU133231 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate Adana-15 polyprotein gene, partial cds
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAACAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACAC
+>FJ498795 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate AK7 nucleocapsid protein (N) gene, complete cds
+ATTCATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCGGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---TTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>JQ308774 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate AKAV-35/SKR/2010 nucleoprotein gene, complete cds
+ATTCATTTTCAATGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCATTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CTGCAAATCCGGTGTCAGACACTGCCTTTACGC
+>KU296969 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate Aksu-1 nucleoprotein (N) gene, partial cds
+-----------------------------------------------------------------------ATCAGTAAG
+TATGGGCAACAG---CTCAACTTTGCTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACAC
+>KU296970 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate Aksu-2 nucleoprotein (N) gene, partial cds
+--------------------------------------ACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAACAG---CTCAACTTTGCTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACAC
+>MH734940 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate B8935 segment S polymerase gene, complete cds
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAACCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+CATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCGGTGTCAGACACTGCCTTTACGC
+>MH734971 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate C1316 segment S polymerase gene, complete cds
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAACCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>MH734964 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS235 segment S polymerase gene, complete cds
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACGTTTAACCCGGATGCAGGGTATGTGGCTTTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>MH734947 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS710 segment S polymerase gene, complete cds
+ATTCATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACGTTTAATCCGGATGCAGGGTATGTGGCTTTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>MF278869 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate HL-3/AKA/M/12/TW nulecoprotein (NP) gene, complete cds
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATTAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CTGCAAATCCGGTGTCAGACACTGCCTTTACGC
+>MG731557 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate HN10169 nucleoprotein mRNA, complete cds
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAACCCAGTGTCAGACACTGCCTTTACGC
+>MG731558 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate HN10174 nucleoprotein mRNA, complete cds
+ATTTATTTTYAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGCTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAACCCAGTGTCAGACACTGCCTTTACGC
+>MF083649 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate KH-1/AKA/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------GAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>MF278878 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-2/AKA/C/15/TW nulecoprotein (NP) gene, complete cds
+ATTCATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACAC
+>MF278871 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-3/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGAATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTGGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CTGCAAATCCGGTGTCAGACACTGCCTTTACGC
+>KF676993 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-5/AKA/M/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------GAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAGGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTCCCCCAGTATA
+CTGCAAATCCGGTGTCAGACACTGCCTTTACGC
+>LC217468 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: ON-1/E/10
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATA
+CTGCAAATCCGGTGTCAGACACTGCCTTTACGC
+>LC113954 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non-structural protein, partial cds, strain: WJ-1SA/P/2014
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------CTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>AB232244 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: CB-2B98
+ATTCATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGCAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGATTAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>AB232286 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KM-7B01
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CAGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>AB232320 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: MP496
+ATTTGTTTTCAATGATGTTCCA-CAACGGAATGCAGCTACGTTTAACCCGGATATAGGGTATGTGGCATTTATTGCTAAA
+TATGGGCAACAT---CTCAACTTCAGTGTTGCTAGAGTCTTCTTCCTCAACCAAAAAAAGGCCAAA-ATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACATTTGGAGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAATACA
+CTGCAAATACAGTGTCAGACACTGCCCTTACCT
+>AB232291 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: MZ-6C01
+ATTTATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCAGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CAGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>AB232261 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1P98
+ATTCATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CTGCAAACCCAGTGTCAGACACTGCCTTTACGC
+>AB000867 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+ATTCATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAAGCCAA-GATGGTCTTACATA
+AGACGTCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>AB000861 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+ATTCATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTTAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTATA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>DQ993248 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain 93 FMX S protein mRNA, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------TGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>MG595766 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain ALT-10KLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------AAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACGC
+>MG595764 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain ALT-1KLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------AAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACAC
+>KP144999 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain DHL10M110 nucleoprotein gene, complete cds
+ATTCATTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGATGCAGGGTATGTGGCATTTATCAGTAAA
+TATGGGCAGCAG---CTCAACTTTACTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAACCCAGTGTCAGACACTGCCTTTACGC
+>KX944288 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain Urf-A-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+----------------------------------------------------------------AAGATGGTCTTACATA
+AGACGCCACAACCAAGTGTCGATCTTACTTTTGCAGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATCCAGTGTCAGACACTGCCTTTACAC
+>NC_043557 SeroGr:Simbu Clade:B specie:Akabane subspc:Sabo Sango virus N and NSs genes, segment S, genomic RNA, isolate An 5077
+ATTCATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTTGGGTATGTGGCATTTATTGCTAAA
+TATGGGGCCCAA---CTCAATTTTGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTGCTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGAGGCATCAAA--TTTACATTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>AF362402 SeroGr:Simbu Clade:B specie:Akabane subspc:Sabo Sango virus strain An5077 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+ATTCCTTTTTCAAGATGTTCCT-CAACGGAATTCTGCTACGTTTAACCCGGAGGTTGGGTATGTGGCATTTATTGCTAAA
+TATGGGGCCCAA---CTCAATTTTGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTGCTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGAGGCATCAAA--TTTACATTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>AF362392 SeroGr:Simbu Clade:B specie:Akabane subspc:Yaba-7 Yaba-7 virus strain Y-7 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+ATTTGTTTTCAACGATGTTCCA-CAACGGAATGCAGCTACATTTAATCCGGACACGGGGTATGTGGCATTTATCAGTAAG
+TATGGGCAACAT---CTCAACTTTTCTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAAGCCAA-GATGGTCCTACATA
+AGACGCCACAACCGAGTGTCGATCTTACATTTGCTGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAGTACA
+CTGCAAATACAGTGTCAGACACTGCCTTTACCC
+>MH734988 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Douglas Douglas virus isolate cs1059 segment S polymerase gene, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAATTTCAGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTGCATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATCACAC
+>MH734987 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Douglas Douglas virus isolate cs400 segment S polymerase gene, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAATTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATCACAC
+>AF362393 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Douglas Douglas virus strain CSIRO 150 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTTGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAATTTCAGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATCACAC
+>HE795104 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Sathuperi Sathuperi virus N and NSs genes, segment S, genomic RNA
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTTGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAGCAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATCACAC
+>AB698469 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Sathuperi Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: KSB-2/C/08, segment S
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAGCAA---CTCAACTTCAGTGTTGCTAGAGTCTTCTTCCTCAACCAAAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATCACAC
+>HE649914 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus genes for nucleocapsid protein and non-structural protein, segment S, genomic RNA, isolate BH80/11-4
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>KC108842 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH02/12-1 segment S nucleocapsid protein (N) gene, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTAAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACAGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>KC108862 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH198/12-5 segment S nucleocapsid protein (N) gene, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTAGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAAGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>KC108868 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH231/12-1 segment S nucleocapsid protein (N) gene, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTAGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>KC108870 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH233/12-1 segment S nucleocapsid protein (N) gene, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAGG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTACCAGACAATGCCATTACAC
+>KC108846 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH28/12-5 segment S nucleocapsid protein (N) gene, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTCAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTCCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>KC108852 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH77/12-1 segment S nucleocapsid protein (N) gene, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGAGTCAAA--TTTACAGTAGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>KY828200 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate PL_15_711_culic nucleocapsid and nonstructural protein genes, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCGACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACGC
+>KT795129 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate S11-1 nucleocapsid protein and nonstructural protein genes, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGATATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAACTTCGGCGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>KT795140 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate S11-2 nucleocapsid protein and nonstructural protein genes, complete cds
+ATTCACTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGCCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCGACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>KT795150 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate S12-4 nucleocapsid protein and nonstructural protein genes, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACAGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATGTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>KT795160 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-6 nucleocapsid protein and nonstructural protein genes, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTAGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTCACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>KT795146 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W13-3 nucleocapsid protein and nonstructural protein genes, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAA
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAGTCCTGTGCCAGACAATGCCATTATAC
+>LC309142 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1449/Norfolk/2017
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGCCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACGC
+>LC309146 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 184/SWWales/2017
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACAWA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGRTTAATAACCATTTTYCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACGC
+>LC309143 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 7754/Cornwall/2017
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACGC
+>LC309148 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 8095/NEWales/2017
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTYCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACGC
+>LC309144 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9321/Lancashire/2017
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAA
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTCACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACGC
+>LC309151 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9363/Shropshire/2017
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGATTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACGC
+>LC309152 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9877/PowysWales/2017
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTMAACCAGAAGAAGGCCAA-GATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACGC
+>KF314813 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain NO/13/04/7678 segment S nucleocapsid protein and non-structural protein genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------TCAAA--TTTACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>AB542965 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus genes for N protein, NSs protein, complete cds, strain: KSB-1/P/06
+ATTCATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+TATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTCCTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACATTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>AB542964 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus genes for N protein, NSs protein, complete cds, strain: ON-1/P/05
+ATTTATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATCGCTAAA
+TATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTCCTCAGTA
+AGACGGCACAACCAAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACATTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>MH734992 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus isolate cs245 segment S polymerase gene, complete cds
+ATTCATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+TATGGGGCCCAG---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTGCTCAGTA
+AGACGGCACAACCAAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACATTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>MH734993 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus isolate cs322 segment S polymerase gene, complete cds
+ATTCATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+TATGGGCACCAG---CTCAACTTCGATGTTGCTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTGCTCAGTA
+AGACGGCACAACCAAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACATTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>MH734994 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus isolate cs347 segment S polymerase gene, complete cds
+ATTCATTTTTCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+TATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTGCTCAGTA
+AGACGGCACAACCAAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACATTGGTTAATAACCATTTTCCCCAATACA
+CAACAAATCCTGTGCCAGACACTGCCCTCACTC
+>AB568273 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus N gene for nucleocapsid, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------ATTTGGTGGCATCAAA--TTTACATTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>MH331909 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus nucleocapsid protein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------TCTTACATTTGGTGGCATCAAA--TTTACATTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>AY048680 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus strain NS-3/P/99 nucleoprotein and non-structural protein genes, complete cds
+ATTTATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+TATAGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTCCTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACATTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>LC198185 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda orthobunyavirus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KS-1/P/15
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAA
+TATGGGCAACAA---CTCAATTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAAA-ATGGTCCTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>AF362404 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda virus strain An5550 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAAGGTGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAATTTCGGGGTTGCTAAAGTCTTCTTCCTCAACCAGAAGAAGGCCAAA-ATGGTCCTACATA
+AGACGGGACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCATTACAC
+>MH734984 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate cs1068 segment S polymerase gene, complete cds
+ATTCATTTTTGAAGATGTACCA-CAACGGAATGCAGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGGTAAG
+TATGGGCAACAA---CTCAACTTCGGTGTTGCTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTCTTACATA
+AGACGGCACAACCAAGTGTCGATCTTACTTTTGGTGGGGTCAAA--TTCACAGTGGTTAATAACCATTTTCCCCAATATG
+TCTCAAATCCTGTGCCAGACAATGCCCTCACTC
+>MH734981 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate cs296 segment S polymerase gene, complete cds
+ATTTATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACATTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+CATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTGCTCAGTA
+AGACGGCACAACCAAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>MH734982 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate cs655 segment S polymerase gene, complete cds
+ATTTATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGCTATGTGGCATTTATTGCTAAA
+CATAGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTACTCAGTA
+AGACGGCACAACCAAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACCC
+>HE795089 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N and NSs genes, segment S, genomic RNA, isolate 38K
+ATTTATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+CATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTACTCAGTA
+AGACGGCACAACCAAGTGTTGATCTTACATTTGGTGGCATCAAG--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>AB334154 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: B7974
+ATTCATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+TATGGGGCCCAA---CTCAATTTTGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTGCTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAACAAATCCTGTGCCAGACACTGCCCTCACTC
+>DQ993247 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus strain KSA 9910 S protein mRNA, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------TGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTTACTC
+>MH484299 SeroGr:Simbu Clade:B specie:Shuni subspc:Kaikalur Kaikalur virus strain VRC 713423-2 segment S, complete sequence
+ATTTATTTTTCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+CATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTACTCAGTA
+AGACGGCACAACCAAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>MF361846 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni orthobunyavirus isolate ISR-129/16 segment S, complete sequence
+GTTTATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+CATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTACTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>MH999473 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni orthobunyavirus strain Shuni#2BHK#2Vero_22:05:98 nucleocapsid protein and NSs genes, complete cds
+GTTTATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+TATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTACTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACCC
+>AF362405 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain An10107 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+GTTTATTTTCCAAAATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+CATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTCCTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACCC
+>NC_043698 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain SAE1809 nucleocapsid and nonstructural protein genes, complete cds
+GTTTATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+CATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAATCAGAAGAAGGCCAA-GATGGTACTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACATTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>KP900859 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/215/14 nucleocapsid protein gene, partial cds
+-TTTATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+CATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTACTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>KP900877 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/2504/1/14 nucleocapsid protein gene, partial cds
+GTTTATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTATTGCTAAA
+CATGGGGCCCAA---CTAAATTTCGATACCGTTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTACTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACATTGCCCTCACTC
+>KP900860 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/263/14 nucleocapsid protein gene, complete cds
+GTTTATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTRGCATTTATTGCTAAA
+CATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTACTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACACTRGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>KP900865 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/273/14 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+-----------------------CGATACCGTTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTACTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>KP900867 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/274/14 nucleocapsid protein gene, complete cds
+GTTTATTTTCCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTAGCATTTATTGCTAAA
+CATGGGGCCCAA---CTCAATTTCGATACCGTTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTACTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTAGTGGCATCAAA--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>KP900870 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/275/1/14 isolate 275/1/14 m nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+----------------------------CCGTTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAA-GATGGTACTCAGTA
+AGACGGCACAACCGAGTGTTGATCTTACATTTGGTGGCATCAAA--TTTACACTGGTTAATAACCATTTTCCCCAATACA
+CAGCAAATCCTGTGCCAGACACTGCCCTCACTC
+>MH999475 SeroGr:Simbu Clade:B specie:Simbu subspc:Simbu Simbu orthobunyavirus strain Ar53#2BHK_02:02:96 nucleocapsid protein gene, partial cds; and NSs gene, complete cds
+----ATTTTTGAGGATGTACCT-CAACGGAACTTATCTACATTTAGTCCGGAGGCAGGGTATGTGGCATTTATTGGTCGG
+TATGGGCAACAA---CTTAACTTCAGTGTTGTTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAAA-ATGGTCTTACATA
+AGACGGCACAACCAAATGTTGATCTTACTTTTGGAGGGGTCAAA--TTTACACTGGTTAATAACAATTTTCCCCAATACA
+CAGCTAATCCGGTGCCAGACAATGCCCTCACCC
+>HE795110 SeroGr:Simbu Clade:B specie:Simbu subspc:Simbu Simbu virus N and NSs genes, segment S, genomic RNA, isolate SA Ar 53
+ATTCATTTTTGAGGATGTACCT-CAACGGAACTTATCTACATTTAGTCCGGAGGCAGGGTATGTGGCATTTATTGGTCGG
+TATGGGCAACAA---CTTAACTTCAGTGTTGTTAGAGTCTTCTTCCTCAACCAGAAGAAGGCCAAA-ATGGTCTTACATA
+AGACGGCACAACCAAATGTTGATCTTACTTTTGGAGGGGTCAAA--TTTACACTGGTTAATAACAATTTTCCCCAATACA
+CAGCTAATCCGGTGCCAGACAATGCCCTCACCC
+>MH734995 SeroGr:Simbu Clade:B specie:Thimiri subspc:Thimiri Thimiri orthobunyavirus isolate cs0001 segment S polymerase gene, complete cds
+ATTCATTTTTCAAGATGTTCCT-CAACGGAATCTCGCTACGTTTAACCCGGAGGTCGGGTATGTGGCATTTACTGCTAAA
+TATGGGGCCCAA---CTCACTGTTGATACAGCTCGAGTGTTCTTCCTCAATCAGAAGCGCGCCAAGGATCGTC-TCCGTC
+AGACGTCGCAACCAGTTGTCGATCTTACATTTAACAAG--CACGTCTTTCGAGTGGTTAATAACCATTTTCCACAATTCC
+AGTCAAATCCTGTGCCAGACACTGCCCTCACTC
+>MH484338 SeroGr:Simbu Clade:B specie:Thimiri subspc:Thimiri Thimiri orthobunyavirus strain VRC 66414 segment S, complete sequence
+GTTTGTATTCGACGATGTACCT-CAACGGACTACATCTACATTTGATCCGGAGAAAGCATATGTGGCATTTGAAGCTGCA
+CACGG---ACAAGCTCTCACTGTTGACACAGCTCGAGTGTTCTTCCTCAATCAAAAGCGCGCCAAGGATCGTC-TCCGTC
+AGACGTCGCAACCAGTTGTCGATCTTACATTTAACAAG--CACGTCTTTCGAGTGGTTAATAACCATTTTCCACAATTCC
+AATCAAACCCGGTTGGTGATGCAGACCTTACCC
+>MH507156 SeroGr:Simbu Clade: specie:Balagodu subspc:Balagodu Balagodu virus strain PB1 segment S, complete sequence
+GATTGTTTTCAATGATGTACCT-CAACGGGCTCAATCTACATTTGATCCGGAGGCGCAATATGTGGCATTTGAAAATACA
+TACCGAGCAAAC---CTCACTGTTAACACCGCTCGAATTTTCTTCCTCAATCAGAAGAGAGCCAAAGATACTC-TACGTC
+AGACGCCGAGGCCCAATGTCAATCTTACTTTTGGGCAGTGCACA--TTTCCAGTGGTTAATAACCATTTTCCACAATTCC
+AATCAAATCCGGTTGCTGATACAGCCCTTACCC
diff --git a/ThDy/sequences/Virus/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu - serogroup -S.711.nt 140-420.fasta b/ThDy/sequences/Virus/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu - serogroup -S.711.nt 140-420.fasta
new file mode 100644
index 0000000..47df288
--- /dev/null
+++ b/ThDy/sequences/Virus/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu - serogroup -S.711.nt 140-420.fasta	
@@ -0,0 +1,1422 @@
+>NC_043562 SeroGr:Simbu Clade:- specie:Leanyer subspc:Leanyer Leanyer virus isolate AusN16701 segment S, complete sequence
+CUUUAUCUAUGAUGAUAGACCUGCAGCAGUCUCAAGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUGCAGAUAAUGUUAGGAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAGGUCGACCUUCAAUUUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGUUGCAGACAAUGCCAUUACAC
+>HM627177 SeroGr:Simbu Clade:- specie:Leanyer subspc:Leanyer Leanyer virus isolate AusN16701 segment S, complete sequence
+CUUUAUCUAUGAUGAUAGACCUGCAGCAGUCUCAAGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUGCAGAUAAUGUUAGGAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAGGUCGACCUUCAAUUUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGUUGCAGACAAUGCCAUUACAC
+>MH734989 SeroGr:Simbu Clade:- specie:Leanyer subspc:Leanyer Leanyer virus isolate cs0002 segment S polymerase gene, complete cds
+CUUUAUCUAUGAUGAUAGACCUGCAGCAGUCUCAAGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUGCAGAUAAUGUUAGGAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAGGUCGACCUUCAAUUUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGUUGCAGACAAUGCCAUUACAC
+>MH734990 SeroGr:Simbu Clade:- specie:Leanyer subspc:Leanyer Leanyer virus isolate cs0010 segment S polymerase gene, complete cds
+CUUUAUCUAUGAUGAUAGACCUGCAGCAGUCUCAAGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUGCAGAUAAUGUUAGGAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAGGUCGACCUUCAAUUUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGUUGCAGACAAUGCCAUUACAC
+>MH734991 SeroGr:Simbu Clade:- specie:Leanyer subspc:Leanyer Leanyer virus isolate cs503 segment S polymerase gene, complete cds
+CUUUAUCUAUGAUGAUAGACCUGCAGCAGUCUCAAGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUGCAGAUAAUGUUAGGAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAGGUCGACCUUCAAUUUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGUUGCAGACAAUGCCAUUACAC
+>NC_043598 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Buttonwillow Buttonwillow virus isolate BFS 5002 nucleocapsid protein gene, complete cds
+GUUCAUCUUUAAUGAUGUACCU-CAACGGUCUACAUCCACGUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCAGUACAGAGCA--AGCCUCAGCGUUAGUGUCGCUAGAAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUC-UACGUCAGACGUCACAACCAAA-----UGUCAAUCUUACUUUUGGCCAGUCAGUC-----UUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCGGUGCCAGAUAACGGUCUUACCC
+>KF697162 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Buttonwillow Buttonwillow virus isolate BFS 5002 nucleocapsid protein gene, complete cds
+GUUCAUCUUUAAUGAUGUACCU-CAACGGUCUACAUCCACGUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCAGUACAGAGCA--AGCCUCAGCGUUAGUGUCGCUAGAAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUC-UACGUCAGACGUCACAACCAAA-----UGUCAAUCUUACUUUUGGCCAGUCAGUC-----UUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCGGUGCCAGAUAACGGUCUUACCC
+>MH484293 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Buttonwillow Buttonwillow virus strain A 7956 segment S, complete sequence
+GUUCAUCUUUAAUGAUGUACCU-CAACGGUCUACAUCUACGUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCAGUACAGAGCA--AGCCUCAGCGUUAGUGUCGCUAGAAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUC-UACGUCAGACGUCACAACCAAA-----UGUCAAUCUUACUUUUGGCCAGUCAGUC-----UUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCGGUGCCAGAUAACGGUCUUACCC
+>AF362398 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Buttonwillow Buttonwillow virus strain A7956 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUCUUUAAUGAUGUACCU-CAACGGUCUACAUCCACGUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCAGUACAGAGCA--NGCCUCAGCGUUAGUGUCGCUAGAAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUC-UACGUCAGACGUCACAACCAAA-----UGUCAAUCUUACUUUUGGCCAGUCAGUC-----UUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCGGUGCCAGAUAACGGUCUUACCC
+>MH507153 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Cat Que Cat Que virus strain JM1 segment S, complete sequence
+GAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGAGCA--AACCUCACUGUUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCCCUUACCU
+>JQ675600 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Cat Que Cat Que Virus strain VN04-2108 nucleoprotein gene, complete cds
+GAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGGGCA--AACCUCACUGUUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCCCUUACCU
+>NC_043590 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Ingwavuma Ingwavuma virus isolate SA An 4165 nucleocapsid protein gene, complete cds
+GAUAGUUUUCAAUGAUGUACCU-CAACGGACUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUGUUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCCAC-----UGUCAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCAAAUCCGGUUGAUGAUUCAGCCCUUACCC
+>KF697141 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Ingwavuma Ingwavuma virus isolate SA An 4165 nucleocapsid protein gene, complete cds
+GAUAGUUUUCAAUGAUGUACCU-CAACGGACUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUGUUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCCAC-----UGUCAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCAAAUCCGGUUGAUGAUUCAGCCCUUACCC
+>AF362395 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Ingwavuma Ingwavuma virus strain An4165 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+GAUAGUUUUCAAUGAUGUACCU-CAACGGACUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUGUUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCCAC-----UGUCAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCAAAUCCGGUUGAUGAUUCAGCCCUUACCC
+>JQ029990 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Ingwavuma Ingwavuma virus strain NIV86208 nucleocapsid protein (N) gene, complete cds
+GAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGAGCA--AACCUCACUGUUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCCCUUACCU
+>JQ029991 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Ingwavuma Ingwavuma virus strain NIV86627 nucleocapsid protein (N) gene, complete cds
+GAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGAGCA--AACCUCACUGUUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCCCUUACCU
+>MH999476 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Manzanilla Manzanilla orthobunyavirus strain Ingwavuma#2BHK_02:02:96 nucleocapsid protein and NSs genes, complete cds
+GAUAGUUUUCAAUGAUGUACCU-CAACGGACUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUGUUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCCAC-----UGUCAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCAAAUCCGGUUGAUGAUUCAGCCCUUACCC
+>KF697148 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Manzanilla Manzanilla virus isolate TRVL 3586 nucleocapsid protein gene, complete cds
+GAUAGUUUUCAAUGAUGUACCU-CAACGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUAUUAACACCGCUAGAAUAUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAC-----UGUCAAUCUUACUUUUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCAAAUCCGGUUAGUGAUACAGCCCUUACCU
+>KP016014 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Manzanilla Manzanilla virus strain DHL10M107 segment S nucleoprotein gene, complete cds
+GAUAGUUUUCAACGAUGUACCU-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGGGCA--AACCUCACUGUUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCGAAUCCGGUUAACGAUACAGCCCUUACCU
+>NC_043593 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Mermet Mermet virus isolate AV 782 nucleocapsid protein gene, complete cds
+GAUAGUUUUCAACGAUGUACCU-CAACGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUAUUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCUAC-----UGUCAAUCUUACUUUUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUUCCACAGUUC-CAAUCAAAUCCGGUUGCAGAUACAGCCCUUACCC
+>KF697152 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Mermet Mermet virus isolate AV 782 nucleocapsid protein gene, complete cds
+GAUAGUUUUCAACGAUGUACCU-CAACGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUAUUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCUAC-----UGUCAAUCUUACUUUUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUUCCACAGUUC-CAAUCAAAUCCGGUUGCAGAUACAGCCCUUACCC
+>KY555813 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Mermet Mermet virus segment S nucleocapsid protein gene, complete cds
+GAUAGUUUUCAACGAUGUACCU-CAACGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUAUUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCUAC-----UGUCAAUCUUACUUUUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUUCCACAGUUC-CAAUCAAAUCCGGUUGCAGAUACAGCCCUUACCC
+>AF362399 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Mermet Mermet virus strain AV-782 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+GAUAGUUUUCAACGAUGUACCU-CAACGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUAUUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCUAC-----UGUCAAUCUUACUUUUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUUCCACAGUUC-CAAUCAAAUCCGGUUGCAGAUACAGCCCUUACCC
+>AB075611 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Oya Oya virus gene for Nucleoprotein, partial cds
+-------------------------------------------------------------------------------------------------------------------------------------------GCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCCCUUACCC
+>KY795950 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Oya Oya virus isolate NIV86209 segment S, complete sequence
+GAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGAGCA--AACCUCACUGUUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCCCUUACCU
+>JX983192 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Oya Oya virus strain SC0806 segment S, complete sequence
+GAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGGGCA--AACCUCACUGUUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCCCUUACCU
+>MH484317 SeroGr:Simbu Clade:A specie:Manzanilla subspc:Oya Oya virus strain VN04-2108 segment S, complete sequence
+GAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGGGCA--AACCUCACUGUUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCCCUUACCU
+>KF697136 SeroGr:Simbu Clade:A specie:Oropouche subspc:Facey's Paddock Facey's Paddock virus isolate Aus Ch 16129 nucleocapsid protein gene, complete cds
+CUUUGUGUUCAACGAUGUACCA-CAACGGGCUACGUCUACGUUUGAUCCGGAGGCGGCAUAUGUGGCAUUUGAAAAUCGUUUCAGAGC--GAAUCUCACUGUUGAUGUCGCUCGAAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUCUUGC-UAAGACGGCGAGAGCAAC-----UGUUGAUAUUACGUUUGGAGGGGUCGUC-----UUUCCAGUGGUUAACAACCAUUAUCCAGAAUACCAACG-GAAUCCGGUGCCAGAUGACGGCCUUACCU
+>AF362400 SeroGr:Simbu Clade:A specie:Oropouche subspc:Facey's Paddock Facey's Paddock virus strain Aus Ch 16129 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+CUUUGUGUUCAACGAUGUACCA-CAACGGGCUACGUCUACGUUUGAUCCGGAGGCGGCAUAUGUGGCAUUUGAAAAUCGUUUCAGAGC--GAAUCUCACUGUUGAUGUCGCUCGAAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUCUUGC-UAAGACGGCGAGAGCAAC-----UGUUGAUAUUACGUUUGGAGGGGUCGUC-----UUUCCAGUGGUUAACAACCAUUAUCCAGAAUACCAACG-GAAUCCGGUGCCAGAUGACGGCCUUACCU
+>KF697144 SeroGr:Simbu Clade:A specie:Oropouche subspc:Iquitos Iquitos virus isolate IQT9924 nucleocapsid protein gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KF150522 SeroGr:Simbu Clade:A specie:Oropouche subspc:Iquitos Iquitos virus strain IQE1005/PER/05 nucleoprotein gene, partial cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KF150523 SeroGr:Simbu Clade:A specie:Oropouche subspc:Iquitos Iquitos virus strain IQE1217/PER/05 nucleoprotein gene, partial cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KF150525 SeroGr:Simbu Clade:A specie:Oropouche subspc:Iquitos Iquitos virus strain IQE1704/PER/05 nucleoprotein gene, partial cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KF150535 SeroGr:Simbu Clade:A specie:Oropouche subspc:Iquitos Iquitos virus strain IQE3728/PER/06 nucleoprotein gene, partial cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KJ866386 SeroGr:Simbu Clade:A specie:Oropouche subspc:Iquitos Iquitos virus strain MIS-0397 nucleocapsid protein and nonstructural protein genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCAAAUCCAGUGCCGGACAACGGUCUUACCC
+>NC_043576 SeroGr:Simbu Clade:A specie:Oropouche subspc:Jatobal Jatobal virus nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCGUUUUCAAUGAUGUACCA-CAAAGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAAAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACGUCGCGGCCCAU-----GGUUGAACUUACUUUUGGAGGG---GUUA--AAUUUACAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGGCAAAUCCGGUGCCAGACAACGGUCUUACCU
+>JQ675601 SeroGr:Simbu Clade:A specie:Oropouche subspc:Jatobal Jatobal virus nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCGUUUUCAAUGAUGUACCA-CAAAGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAAAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACGUCGCGGCCCAU-----GGUUGAACUUACUUUUGGAGGG---GUUA--AAUUUACAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGGCAAAUCCGGUGCCAGACAACGGUCUUACCU
+>AF312382 SeroGr:Simbu Clade:A specie:Oropouche subspc:Jatobal Jatobal virus nucleoprotein (N) gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KF697146 SeroGr:Simbu Clade:A specie:Oropouche subspc:Madre Madre de Dios virus isolate FMD 1303 nucleocapsid protein gene, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGCCAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAAGAU-GUCUUACGUAAGACGUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCAAAUCCAGUGCCGGACAACGGUCUUACCU
+>KJ866389 SeroGr:Simbu Clade:A specie:Oropouche subspc:Madre Madre de Dios virus strain INHRR 17a-10 structural nucleocapsid protein and nonstructural protein genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGCCAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAAGAU-GUCUUACGUAAGACGUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCAAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG100826 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche like virus isolate A12 nucleocapsid gene, partial cds
+------------------------------------------------------------------------------------------------------UGGUGUUGCUAGAGUCUUCUUCUCCCACCAAAAGAUGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG100825 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche like virus isolate A4 nucleocapsid gene, partial cds
+-------------------------------------------------------------------------------------------------------------GUUGUAGUAGUCCUCCGG---CACGGUAUGGCCAAAGACUG-CCUACGUGAGCAAUGGAUGCGUGA-----ACUAGAAGUUGCUGUAAGUGAG---AUCC--AAUUUGCAAUGGUUAAUAACCAAUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MK643115 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche orthobunyavirus strain FCT00025/COL/2018 nucleoprotein (N) and nonstructural protein (NS) genes, complete cds
+GUUCAUUUUCAACGAUGUACCW-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACGUCGCGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAAUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MF620127 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus culture NCPV:1409261v segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM107840 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate AMLq13 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM107841 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate AMLq14 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM107842 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate AMLq16 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830443 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate AR136921 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830448 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate AR366927 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>MF155931 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BA/BR/UFBA/LabViro/01 polyprotein gene, partial cds
+------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY993909 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAn 206119 nucleocapsid protein and non-structural protein mRNAs, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747539 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAn 206119 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY993910 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAn 208402 nucleocapsid protein and non-structural protein mRNAs, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747542 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAn 208402 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY993911 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAn 208819 nucleocapsid protein and non-structural protein mRNAs, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747545 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAn 208819 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY993912 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAn 208823 nucleocapsid protein and non-structural protein mRNAs, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747521 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAn 626990 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG747536 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAr 136921 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG747524 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAr 19886 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747551 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeAr 366927 segment S, complete sequence
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG747533 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 121923 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUUGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----GGUUGACCUUACUUUUGGUCGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUGCCC
+>MG747527 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 29086 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUUGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----GGUCGACCUUACUUUUGGUCGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUGCCC
+>MG747530 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 29090 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUUGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----GGUUGACCUUACUUUUGGUCGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUGCCC
+>MG747548 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 355173 segment S, complete sequence
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUCAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG747554 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 385591 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>MG747506 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 389865 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGAAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747509 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 390242 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUGCGAAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747518 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 421086 segment S, complete sequence
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAUCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUACAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747512 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 472433 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG747515 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 472435 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>MG747602 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 498913 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG747605 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 505768 segment S, complete sequence
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG747557 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 532314 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCAUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747560 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 532422 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCCUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747563 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 532490 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGCCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>MG747566 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 532500 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>MG747569 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 541140 segment S, complete sequence
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG747503 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 543100 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUUUUAGUGGG---GUUC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG747572 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 543629 segment S, complete sequence
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747575 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 543760 segment S, complete sequence
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747578 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 543857 segment S, complete sequence
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747596 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 707287 segment S, complete sequence
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG747593 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 708139 segment S, complete sequence
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCAAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG747599 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH 708717 segment S, complete sequence
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>KP691632 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH759146 segment S, complete sequence
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KP691623 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate BeH759620 segment S, complete sequence
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830444 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H244576 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830445 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H271078 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830447 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H356898 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCCAAUCCAGUCCCGGACAACGGUCUUACCC
+>HQ830449 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H366781 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>HQ830450 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H384192 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830451 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H384193 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830452 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H385591 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>HQ830453 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H389865 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGAAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830454 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H390242 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUGCGAAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830455 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H472433 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830456 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H472435 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>HQ830457 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H498913 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830458 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H505764 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830459 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H505768 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830460 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H505805 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830461 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H532314 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCAUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830462 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H532422 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCCUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830463 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H532490 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGCCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>HQ830464 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H532500 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>HQ830465 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H543091 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>HQ830466 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H543100 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUUUUAGUGGG---GUUC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830467 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H543629 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830468 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H543638 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGAAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830469 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H543639 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830470 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H543760 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830471 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H543857 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830472 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H543880 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HQ830473 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H706890 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGCACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUCAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830474 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H706893 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGCACUACAUCCACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUCAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830476 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H707157 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAC-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830475 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H708139 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCAAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830477 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H708717 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830479 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H758669 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUACUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830478 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H758687 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830486 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759018 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACCACCUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830487 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759023 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830484 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759038 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830488 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759041 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830489 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759042 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830491 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759044 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830480 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759525 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAGGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830482 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759531 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAGGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AGUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830481 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759541 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830483 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H75955 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HQ830485 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate H759562 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KP347671 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate OROV/MT_CbaH282/2012 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUGGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KP347673 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate OROV/MT_NMH470/2012 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747587 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate PMOH 682426 segment S, complete sequence
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747590 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate PMOH 682431 segment S, complete sequence
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>MG747581 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate PPS 522 H 669314 segment S, complete sequence
+GUUCAUUUCCAACGAUGUACCA-CAUCGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MG747584 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus isolate PPS 523 H 669315 segment S, complete sequence
+GUUCAUUUCCAACGAUGUACCA-CAUCGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY237111 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164553 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain 01-812-98 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>AY117135 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeAn 626990 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KP052852 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeAn19991 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164532 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeAn19991 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470111 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeAr136921 nucleocapsid protein gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470107 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeAr19886 nucleocapsid protein gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470113 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeAr271708 nucleocapsid protein gene, partial cds
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGCAAGACAUCCAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470117 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeAr366927 nucleocapsid protein gene, partial cds
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>AF164539 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeAr473358 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY704559 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH 521086 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAUCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUACAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY704563 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH 543629 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY704564 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH 543638 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY704562 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH 543639 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY704560 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH 543733 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY704561 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH 543745 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGAAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY704568 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH 543760 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY704567 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH 543790 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY704566 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH 543857 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AY704565 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH 543880 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+GUUCCUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>EF467368 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH 622544 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAGCGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470110 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH121923 nucleocapsid protein gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUUGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----GGUUGACCUUACUUUUGGUCGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUGCCC
+>HM470112 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH244576 nucleocapsid protein gene, partial cds
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>AF164533 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH271815 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470108 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH29086 nucleocapsid protein gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUUGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----GGUCGACCUUACUUUUGGUCGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUGCCC
+>HM470109 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH29090 nucleocapsid protein gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUUGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----GGUUGACCUUACUUUUGGUCGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUGCCC
+>HM470114 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH355173 nucleocapsid protein gene, partial cds
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUCAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470115 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH355186 nucleocapsid protein gene, complete cds
+GUUCAUUUUCAGCGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470116 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH356898 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCCAAUCCAGUCCCGGACAACGGUCUUACCC
+>HM470118 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH366781 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>AF164534 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH379693 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAGGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164535 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH381114 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470119 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH384192 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470120 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH384193 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470121 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH385591 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>HM470103 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH389865 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGAAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164536 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH390233 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470104 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH390242 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUGCGAAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164537 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH472200 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164538 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH472204 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470105 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH472433 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470106 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH472435 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>AF164540 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH475248 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470139 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH498913 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>AF164541 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH504514 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAGCGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164542 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH505442 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>AF164543 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH505663 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470140 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH505764 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470141 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH505768 nucleocapsid protein gene, partial cds
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470142 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH505805 nucleocapsid protein gene, partial cds
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470122 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH532314 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCAUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470123 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH532422 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCCUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470124 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH532490 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGCCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>HM470125 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH532500 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>HM470126 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH541140 nucleocapsid protein gene, partial cds
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>AF164544 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH541863 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAGCGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164545 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH543033 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164547 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH543087 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470101 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH543091 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGUCUUACCC
+>HM470102 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH543100 nucleocapsid protein gene, partial cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUUUUAGUGGG---GUUC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>AF164548 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH543618 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164546 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH544552 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>HM470133 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH706890 nucleocapsid protein gene, complete cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGCACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUCAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470134 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH706893 nucleocapsid protein gene, complete cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGCACUACAUCCACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUCAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470136 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH707157 nucleocapsid protein gene, complete cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAC-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470137 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH707287 nucleocapsid protein gene, partial cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470135 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH708139 nucleocapsid protein gene, partial cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCAAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>HM470138 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BeH708717 nucleocapsid protein gene, complete cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGUCUUACCU
+>EU561644 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain BR/2004/Acre27 nucleocapsid protein (N) gene, partial cds
+---------------------------------------------------------------------UUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCCUACCC
+>AF164551 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain DEI209 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>AF164555 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain GML444477 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KC759130 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain GML-444479 segment S nucleocapsid protein (N) and nonstructural protein (NS) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164556 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain GML444911 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164557 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain GML445252 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>AF164558 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain GML450093 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KC759127 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain IQT-1690 segment S nucleocapsid protein (N) and nonstructural protein (NS) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>AF164549 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain IQT1690 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>AF164552 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain IQT4083 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUUAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>AF164554 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain IQT7085 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCUUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>AF164550 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain MD023 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUUAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>MF926352 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV/EC/Esmeraldas/087/2016 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACGUCGCGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAAUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KP310500 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV/MT_CbaAR1229/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KP310501 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV/MT_CbaAR1256/2013 polyprotein gene, partial cds
+------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KP310502 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV/MT_CbaAR1458/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KP310504 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV/MT_CbaAR549/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KP310506 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV/MT_CbaAR632/2013 polyprotein gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAUAGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUGGAAUCCAGUGCCGGACAACGGUAUUACCC
+>KP310507 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV/MT_CbaAR833/2013 polyprotein gene, partial cds
+------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MH337272 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV_BR/MT_CbaH_1248/2015 nucleoprotein gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MH337271 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV_BR/MT_CbaH_1251/2015 nucleoprotein gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MH331012 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV_BR/MT_CbaH_1256/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MH337270 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV_BR/MT_CbaH_1279/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MH337268 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV_BR/MT_CbaH_1292/2015 nucleoprotein gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUGAUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MH337267 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV_BR/MT_CbaH_1293/2015 nucleoprotein gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>MH337269 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain OROV_BR/MT_VGH_1303/2015 nucleoprotein gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>EF467371 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain PMOH 682426 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+AUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>EF467372 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain PMOH 682431 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>EF467370 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain PPS 522 H 669314 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUCCAACGAUGUACCA-CAUCGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>EF467369 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain PPS 523 H 669315 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+GUUCAUUUCCAACGAUGUACCA-CAUCGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KC759124 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TRVL-9760 segment S nucleocapsid protein (N) and nonstructural protein (NS) genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KP026181 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TRVL9760 segment S, complete sequence
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>AF164531 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TRVL9760 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KP795074 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TVP-19244/DEI-216 structural nucleocapsid protein and non-structural protein genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KP795077 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TVP-19249/GML-444672 structural nucleocapsid protein and non-structural protein genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KP795080 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TVP-19250/GML-444839 structural nucleocapsid protein and non-structural protein genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KP795083 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TVP-19254/GML-480914 structural nucleocapsid protein and non-structural protein genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAGUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KP795086 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TVP-19256/IQE-7894 structural nucleocapsid protein and non-structural protein genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUACAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KP795089 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TVP-19257/IQT-1690 structural nucleocapsid protein and non-structural protein genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KP795092 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TVP-19258/IQT-4083 structural nucleocapsid protein and non-structural protein genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KP795095 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TVP-19259/IQT-7085 structural nucleocapsid protein and non-structural protein genes, complete cds
+GUUUAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KP795098 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TVP-19260/MD-203 structural nucleocapsid protein and non-structural protein genes, complete cds
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>KP795104 SeroGr:Simbu Clade:A specie:Oropouche subspc:Oropouche Oropouche virus strain TVP-19264/PAN-481126 structural nucleocapsid protein and non-structural protein genes, complete cds
+GUUCAUUUUCAACGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAGUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCC
+>KP691629 SeroGr:Simbu Clade:A specie:Oropouche subspc:Perdoes Perdoes virus isolate BeAn790177 segment S, complete sequence
+GUUCAUUUUCAAUGAUGUACCA-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGUCUUACCU
+>NC_043596 SeroGr:Simbu Clade:A specie:Oropouche subspc:Utinga Utinga virus isolate Be An 84785 nucleocapsid protein gene, complete cds
+AUUUGUAUUUAAUGAUGUCCCC-CAGAGGUCUACAUCAACAUUUGACCCAGAGGUGGCCUAUGCUACUUUUGAAGC--AGCAUUUCGCCAGACUCUAAAUGUCAAUGUUGUUAGAGUGUUCUUUUUAAACCAAAAGAAUGCUAAAAAU-GUUUUGAGAAAAACCUCAAGACCAAA-----UGUGGACUUGACAUUUGGGGG-----UGCAACCUUUCCAAUUGUCAACAACCAUUUUCCUCAAUUU-CAAUCAAAUCCAGUCCCUGACAACGGACUCACUC
+>KF697156 SeroGr:Simbu Clade:A specie:Oropouche subspc:Utinga Utinga virus isolate Be An 84785 nucleocapsid protein gene, complete cds
+AUUUGUAUUUAAUGAUGUCCCC-CAGAGGUCUACAUCAACAUUUGACCCAGAGGUGGCCUAUGCUACUUUUGAAGC--AGCAUUUCGCCAGACUCUAAAUGUCAAUGUUGUUAGAGUGUUCUUUUUAAACCAAAAGAAUGCUAAAAAU-GUUUUGAGAAAAACCUCAAGACCAAA-----UGUGGACUUGACAUUUGGGGG-----UGCAACCUUUCCAAUUGUCAACAACCAUUUUCCUCAAUUU-CAAUCAAAUCCAGUCCCUGACAACGGACUCACUC
+>KF697158 SeroGr:Simbu Clade:A specie:Oropouche subspc:Utive Utive virus isolate Pan An 48878 nucleocapsid protein gene, complete cds
+AUUUGUAUUCAAUGAUGUCCCC-CAGAGGUCUACAUCAACAUUUGACCCAGAGGUGGCCUAUGCUACUUUUGAAGC--AGCAUUUCGCCAGACUCUAAAUGUCAAUGUUGUUAGAGUGUUCUUUUUAAACCAAAAGAAUGCUAAAAAU-GUUUUGAGAAAAACCUCAAGACCAAA-----UGUGGAUUUGACAUUUGGGGG-----UGCAACCUUUCCAAUUGUCAACAACCAUUUUCCUCAAUUU-CAAUCAAAUCCAGUCCCUGAUAAUGGGCUCACUC
+>MH999470 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane orthobunyavirus strain Akabane#2Vero#3BHK_22:05:98 nucleocapsid protein gene, partial cds; and NSs gene, complete cds
+-------UUUCACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MH999469 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane orthobunyavirus strain Cu170#1Vero_21:07:94 nucleocapsid protein and NSs genes, complete cds
+AUUUAUCUUUGAUGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUCACUGUUGCUCGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGACCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGUGCCAGACACUGCCCUUACAC
+>MH999468 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane orthobunyavirus strain Sabo#2Vero#1BHK_03:08:94 nucleocapsid protein and NSs genes, complete cds
+AUUUAUCUUUGAUGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUCACUGUUGCUCGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGACCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGUGCCAGACACUGCCCUUACAC
+>AB244090 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus gene for nucleocapsid, partial cds, strain: Okayama 2001
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCAGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>AB289321 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus genomic RNA, segment S, complete sequence, strain: Iriki
+AUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB289319 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus genomic RNA, segment S, complete sequence, strain: Okayama2001
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCAGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>AB289320 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus genomic RNA, segment S, complete sequence, strain: Okayama2004
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB968527 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus genomic RNA, segment S, complete sequence, strain: TS-C2
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000851 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus genomic RNA, viral-complementary sequence of S RNA segment, complete sequence
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MF278881 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate 08H65-1 nulecoprotein (NP) gene, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MF278880 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate 08H65-2 nulecoprotein (NP) gene, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MF278873 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate 12H37 nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MF278876 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate 13H22 nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACAC
+>MF278872 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate 13H33 nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MF278875 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate 13H35 nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACAC
+>FJ498797 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate 93FMX nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACACCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MF278877 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate 93H78 nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>KU133231 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate Adana-15 polyprotein gene, partial cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAACAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>FJ498795 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate AK7 nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCGGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGU-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>JQ308772 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate AKAV-17/SKR/2010 nucleoprotein gene, complete cds
+AUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>JQ308773 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate AKAV-32/SKR/2010 nucleoprotein gene, complete cds
+AUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>JQ308774 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate AKAV-35/SKR/2010 nucleoprotein gene, complete cds
+AUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAUUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>JQ308771 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate AKAV-7/SKR/2010 nucleoprotein gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>KU296969 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate Aksu-1 nucleoprotein (N) gene, partial cds
+-----------------------------------------------------------------------AUCAGUAAGUAU-GGGCAACAGC-UCAACUUUGCUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>KU296970 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate Aksu-2 nucleoprotein (N) gene, partial cds
+--------------------------------------ACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAACAGC-UCAACUUUGCUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>MH734940 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate B8935 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MH734971 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate C1316 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734941 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS0016 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734942 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS0221 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734951 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS1209 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734972 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS1383 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734952 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS1416 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734973 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS1586 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734953 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS1711 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734954 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS1776 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734955 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS1777 segment S polymerase gene, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734956 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS1778 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734974 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS1796 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734957 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS1798 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734960 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS215 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734961 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS228 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734962 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS231 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734963 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS233 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734964 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS235 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734965 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS236 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734966 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS241 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734943 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS294 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734944 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS396 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734967 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS502 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734945 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS505 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734968 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS506 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734969 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS661 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734946 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS700 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734947 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS710 segment S polymerase gene, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACGUUUAAUCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734948 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS744 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734949 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS749 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734950 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS951 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734970 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate CS979 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734958 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate DPP231 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734975 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate DPP232 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734976 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate DPP237 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734977 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate DPP240 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH734978 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate DPP261 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MF278868 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate HL-1/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MF278869 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate HL-3/AKA/M/12/TW nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MG731557 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate HN10169 nucleoprotein mRNA, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCCUUUACGC
+>MG731558 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate HN10174 nucleoprotein mRNA, complete cds
+AUUUAUUUUYAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGCUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCCUUUACGC
+>MF083649 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate KH-1/AKA/C/13/TW nucleoprotein (NP) gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MF278882 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate KH-1/AKA/C/13/TW nulecoprotein (NP) gene, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MF083650 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate KH-1/AKA/M/14/TW nucleoprotein (NP) gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MF278870 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate PT-1/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MH734959 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate R7949 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---AUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MF278879 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate Tainan/17H8 nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MF083654 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate TN-1/AKA/M/15/TW nucleoprotein (NP) gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGAGUCAGACACUGCCUUUACGC
+>MF083655 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate TN-2/AKA/M/15/TW nucleoprotein (NP) gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACGACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>KF676987 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-1/AKA/C/12/TW nucleocapsid protein (NP) gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MF278866 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-1/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MF083648 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-1/AKA/M/14/TW nucleoprotein (NP) gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MF083651 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-1/AKA/M/15/TW nucleoprotein (NP) gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MF278874 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-1/AKA/M/15/TW nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>KF676988 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-2/AKA/C/12/TW nucleocapsid protein (NP) gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MF278867 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-2/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MF083652 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-2/AKA/C/15/TW nucleoprotein (NP) gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>MF278878 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-2/AKA/C/15/TW nulecoprotein (NP) gene, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>MF278871 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-3/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGAAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUGGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>MF083653 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-3/AKA/M/15/TW nucleoprotein (NP) gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>KF676993 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-5/AKA/M/12/TW nucleocapsid protein (NP) gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAGG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>KF676994 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus isolate YL-6/AKA/C/12/TW nucleocapsid protein (NP) gene, partial cds
+---------------------------------------------------------------------------------------------------------------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAGG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>LC217478 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: EH-1/P/11
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>LC217480 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: EH-3/Br/11
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>LC217469 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: HG-1/P/10
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>LC217474 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: HS-1/Br/11
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>LC217483 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KM-1/B/13
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUCACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCCUUUACGC
+>LC217464 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KM-2/B/08
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>LC217486 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KSB-2/P/13
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUCACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCCUUUACGC
+>LC217466 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KSB-3/P/08
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>LC217468 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: ON-1/E/10
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>LC217482 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: ON-1/P/12
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>LC217470 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: ON-5/E/10
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>LC217460 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: OY-1/P/08
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUCACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>LC217472 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: OY-2/B/11
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>LC217459 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: TT-1/E/08
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>LC217458 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: YG-1/Br/07
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>LC113954 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleocapsid, non-structural protein, partial cds, strain: WJ-1SA/P/2014
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232244 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: CB-2B98
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGCAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---AUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232319 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: CY-77
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232175 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: Iriki956-5-A
+AUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232284 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KM-3B01
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232286 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KM-7B01
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232228 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KS-94P97
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232214 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-1C94
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232313 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-2E03
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>AB232305 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-33C01
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232222 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-4P95
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232223 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-5E95
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232245 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KT-1S98
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCAGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232320 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: MP496
+AUUUGUUUUCAAUGAUGUUCCA-CAACGGAAUGCAGCUACGUUUAACCCGGAUAUAGGGUAUGUGGCAUUUAUUGCUAAAUAU-GGGCAACAUC-UCAACUUCAGUGUUGCUAGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACAUUUGGAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-ACUGCAAAUACAGUGUCAGACACUGCCCUUACCU
+>AB232268 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: MZ-1C00
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232291 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: MZ-6C01
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCAGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232209 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1E91
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAAUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232260 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1E98
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232213 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1P93
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232261 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1P98
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAACCCAGUGUCAGACACUGCCUUUACGC
+>AB232218 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-2E94
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232207 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-3E90
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232211 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-3E91
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAAUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232240 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-3F97
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232264 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-5B98
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232310 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-8B01
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB232176 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: YG-1E85
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAC-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>AB232196 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: YG-88-2
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AY383717 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus nucleocapsid protein (N) mRNA, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000854 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>AB000853 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>AB000864 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000867 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAAGCCAA-GAUGGUCUUACAUAAGACGUCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000858 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000855 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000852 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000857 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000862 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000860 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000868 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---AUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000866 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---AUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000861 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000859 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000863 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus RNA for nucleoprotein, complete cds
+AUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB426271 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KM-1/Br/06
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>AB426272 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KM-2/Br/06
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>AB426273 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KM-3/Ce/06
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>AB373232 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KS-2/Mo/06
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>AB426280 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KSB-3/P/06
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>AB373234 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus S segment N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: KS-1/P/06
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-ACUGCAAAUCCGGUGUCAGACACUGCCUUUACGC
+>DQ993248 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain 93 FMX S protein mRNA, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595766 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain ALT-10KLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595764 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain ALT-1KLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>MG595767 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain ALT-3CKLOK-TR2016 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595768 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain ALT-6CKLOK-TR2016 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595765 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain ALT-6KLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595774 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain ANT-Clng21-TR2015 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595760 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain ANT-S174LOK-TR2016 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595761 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain ANT-S175LOK-TR2016 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595758 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain ANT-S47LOK-TR2015 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595762 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain CYR-S230LOK-TR2017 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595763 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain CYR-S235LOK-TR2017 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>KP144999 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain DHL10M110 nucleoprotein gene, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAAUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCCUUUACGC
+>KY284023 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain DHL10M110 segment S, complete sequence
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAAUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCCUUUACGC
+>KY385908 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain GXLCH01 segment S nucleocapsid protein gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAC-ACUGCAAACCCAGUGUCAGACACUGCCUUUACGC
+>KY381272 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain GXLCH02 segment S nucleocapsid protein gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCCUUUACGC
+>KY381273 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain GXLCH04 segment S nucleocapsid protein gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCCUUUACGC
+>KY381274 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain GXLCH16-70 segment S nucleocapsid protein gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCCUUUACGC
+>AF034941 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain Iriki nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+AUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AY378155 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain ISR-01 nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AF034939 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain Jagar-39 nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>KR260714 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain JaLAB39 segment S, complete sequence
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>DQ973189 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain K-9 nucleocapsid protein (N) and nonstructural protein (NS) mRNAs, complete cds
+AUUCAUUUCCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG764556 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain KMR-21Cl-TR2016 nucleocapsid protein gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595772 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain KRK-Cs34E-TR2015 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595770 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain KRK-Cs34F-TR2015 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>MG595769 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain KRK-Cs34G-TR2015 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>MG595771 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain KRK-Cs34I-TR2015 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595773 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain KRK-Cs34J-TR2015 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>DQ973188 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain KV0505 nucleocapsid protein (N) and nonstructural protein (NS) mRNAs, complete cds
+AUUCAUUUCCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>KU375444 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain NM/BS/1 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCCUUUACGC
+>AF529883 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain NT-14 nucleoprotein and nonstructural protein genes, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AF034942 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain Obe-1 nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AF034940 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain PT-17 nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+AUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MG595759 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain SDG-S114LOK-TR2015 nucleocapsid protein (N) gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>KX944288 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain Urf-A-Coty-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>MG764559 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain URF-D4cot-TR2015 nucleocapsid protein gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>KX944289 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain Urf-D-Coty-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>KX944293 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain Urf-F-Coty-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>MG764558 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain URF-G1cot-TR2015 nucleocapsid protein gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>KX944290 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain Urf-G-Coty-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>MG764557 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain URF-I2Pcot-TR2015 nucleocapsid protein gene, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>KX944291 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain Urf-I-Coty-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>KX944292 SeroGr:Simbu Clade:B specie:Akabane subspc:Akabane Akabane virus strain Urf-K-Coty-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCCUUUACAC
+>NC_043554 SeroGr:Simbu Clade:B specie:Akabane subspc:Sabo Sabo virus N and NSs genes, segment S, genomic RNA, isolate IB AN 9398
+AUUUAUCUUUGAUGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUCACUGUUGCUCGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGACCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGUGCCAGACACUGCCCUUACAC
+>HE795098 SeroGr:Simbu Clade:B specie:Akabane subspc:Sabo Sabo virus N and NSs genes, segment S, genomic RNA, isolate IB AN 9398
+AUUUAUCUUUGAUGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUCACUGUUGCUCGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGACCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGUGCCAGACACUGCCCUUACAC
+>AF362396 SeroGr:Simbu Clade:B specie:Akabane subspc:Sabo Sabo virus strain An9398 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+AUUUAUCUUUGAUGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUCACUGUUGCUCGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGACCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGUGCCAGACACUGCCCUUACAC
+>NC_043557 SeroGr:Simbu Clade:B specie:Akabane subspc:Sabo Sango virus N and NSs genes, segment S, genomic RNA, isolate An 5077
+AUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUUGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGAGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>HE795101 SeroGr:Simbu Clade:B specie:Akabane subspc:Sabo Sango virus N and NSs genes, segment S, genomic RNA, isolate An 5077
+AUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUUGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGAGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AF362402 SeroGr:Simbu Clade:B specie:Akabane subspc:Sabo Sango virus strain An5077 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+AUUCCUUUUUCAAGAUGUUCCU-CAACGGAAUUCUGCUACGUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUUGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGAGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH734996 SeroGr:Simbu Clade:B specie:Akabane subspc:Tinaroo Tinaroo virus isolate cs153 segment S polymerase gene, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AB000819 SeroGr:Simbu Clade:B specie:Akabane subspc:Tinaroo Tinaroo virus RNA for two overlapping orfs, complete cds
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>MH484341 SeroGr:Simbu Clade:B specie:Akabane subspc:Tinaroo Tinaroo virus strain CSIRO 153 segment S, complete sequence
+AUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCCUUUACGC
+>AF362392 SeroGr:Simbu Clade:B specie:Akabane subspc:Yaba-7 Yaba-7 virus strain Y-7 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+AUUUGUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGACACGGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUUUCUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAAGCCAA-GAUGGUCCUACAUAAGACGCCACAACCGAG-----UGUCGAUCUUACAUUUGCUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUACAGUGUCAGACACUGCCUUUACCC
+>MH484350 SeroGr:Simbu Clade:B specie:Akabane subspc:Yaba-7 Yaba-7 virus strain Yaba 7 segment S, complete sequence
+AUUUGUUUUCAACGAUGUUCCA-CAACGGAAUGCAGCUACAUUUAAUCCGGACACGGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUUUCUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAAGCCAA-GAUGGUCCUACAUAAGACGCCACAACCGAG-----UGUCGAUCUUACAUUUGCUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUACAGUGUCAGACACUGCCUUUACCC
+>MH734988 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Douglas Douglas virus isolate cs1059 segment S polymerase gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCAGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUGCAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUCACAC
+>MH734987 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Douglas Douglas virus isolate cs400 segment S polymerase gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUCACAC
+>HE795092 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Douglas Douglas virus N and NSs genes, segment S, genomic RNA, isolate 93-6
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCAGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGGG---UCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUCACAC
+>AF362393 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Douglas Douglas virus strain CSIRO 150 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCAGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUCACAC
+>HE795104 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Sathuperi Sathuperi virus N and NSs genes, segment S, genomic RNA
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUCACAC
+>AB125371 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Sathuperi Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCGGUGUUGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUCACAC
+>AB698469 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Sathuperi Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: KSB-2/C/08, segment S
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCAGUGUUGCUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUCACAC
+>AB698468 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Sathuperi Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: OI-3/P/07, segment S
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUCACAC
+>AB698467 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Sathuperi Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: ON-1/P/06, segment S
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUCACAC
+>AF362403 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Sathuperi Sathuperi virus strain I-11155 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUCACAC
+>HE649914 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus genes for nucleocapsid protein and non-structural protein, segment S, genomic RNA, isolate BH80/11-4
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108842 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH02/12-1 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUAAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACAGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108854 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH127/12-16 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108856 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH148/12-9 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108860 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH197/12-3 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGAAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108862 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH198/12-5 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAAGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108864 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH199/12-5 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCGCAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108866 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH200/12-2 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACCUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108868 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH231/12-1 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUAGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108870 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH233/12-1 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAGGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUACCAGACAAUGCCAUUACAC
+>KC108872 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH237/12-4 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108874 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH248/12-1 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108846 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH28/12-5 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUCAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108878 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH336/12-1 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108848 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH37/12-2 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUAAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KP731865 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH619/12 segment S nucleocapsid protein (N) and nonstructural protein (N) genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC108852 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate BH77/12-1 segment S nucleocapsid protein (N) gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGA---GUCA--AAUUUACAGUAGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KP731867 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate D495/12-1 segment S nucleocapsid protein (N) and nonstructural protein (N) genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>NC_043582 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate F6 segment S, complete sequence
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>JX853181 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate Germany segment S, complete sequence
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC355456 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate HL1 segment S, complete sequence
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCAGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KY828206 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate PL_12_1018-08_bos nucleocapsid and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KY828196 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate PL_12_25_culic nucleocapsid and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KY828197 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate PL_12_27_culic nucleocapsid and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KY828201 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate PL_12_28_culic nucleocapsid and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCGACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KY828203 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate PL_12_36_culic nucleocapsid and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KY828202 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate PL_12_38_culic nucleocapsid and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KY828204 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate PL_13_130-11_ovis nucleocapsid and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUACCAGACAAUGCCAUUACAC
+>KY828205 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate PL_13_130-6_ovis nucleocapsid and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KY828198 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate PL_13_356-2_ovis nucleocapsid and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KY828199 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate PL_14_962_culic nucleocapsid and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>KY828200 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate PL_15_711_culic nucleocapsid and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCGACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>KT795129 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate S11-1 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGCGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795140 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate S11-2 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCACUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGCCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCGACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795157 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate S11-3 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-CCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795145 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate S12-1 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795150 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate S12-4 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACAGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUGUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795124 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate S12-5-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGCGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795134 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate S12-6b-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGCGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC986389 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate TR3 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>KT795147 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-10-1/3 nucleocapsid protein and truncated nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAUGUCUU-AAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795111 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-10-2/3 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795153 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-10-3/3 nucleocapsid protein and truncated nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUAGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795149 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-12-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795135 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-13 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795156 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-16-2/3 nucleocapsid protein and truncated nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUAAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795151 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-17-2/2 nucleocapsid protein and truncated nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGAUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795133 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-19 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGCGUUGCUAGAGCCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795142 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-3 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795154 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-4 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCAG--AUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795160 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-6 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUCACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795158 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-7 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795159 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W12-9-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795144 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W13-1 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAGCCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KT795146 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W13-3 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAGUCCUGUGCCAGACAAUGCCAUUAUAC
+>KT795141 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus isolate W13-4-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC309150 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1309/Lancashire/2017
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>LC309156 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 138/IsleofWight/2012
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC309142 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1449/Norfolk/2017
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGCCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>LC309158 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 174/Kent/2012
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC309159 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 182/EastSussex/2012
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCUAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC309162 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1833/Devon/2012
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC309146 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 184/SWWales/2017
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAWAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGRUUAAUAACCAUUUUYCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>LC309165 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1892/Oxfordshire/2012
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGAUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC309166 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1916/Dorset/2012
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCCAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC309147 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 2179/Lancashire/2017
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>LC309155 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 239/Devon/2012
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUAGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC309160 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 242/Warickshire/2012
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAUGUCUU-AAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC309141 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 5082/Shropshire/2017
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>LC309143 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 7754/Cornwall/2017
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>LC309153 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 777/Norfolk/2012
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUGCAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC309148 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 8095/NEWales/2017
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUYCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>LC309149 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 838/Cumbria/2017
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>LC309161 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 901/Dorset/2012
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC309144 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9321/Lancashire/2017
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUCACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>LC309151 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9363/Shropshire/2017
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGAUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>LC309145 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9594/Yorkshire/2017
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>LC309152 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9877/PowysWales/2017
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUMAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>MH160002 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain 522SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MH160003 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain 525SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MH160004 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain 526SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MH160005 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain 529SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MH160006 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain 532SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MH160007 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain 533SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MH160008 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain 534SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MH160009 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain 535SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MH160010 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain 537SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MG640115 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain ALT-11GLOK-TR2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MG640114 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain ALT-12GLOK-TR2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MG640113 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain ALT-2GLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MG640109 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain ALT-61GLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MG640110 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain ALT-62GLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MG640116 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain ALT-6GLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>KX609704 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain HTY-10CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>KX609698 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain HTY-1CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>KX609699 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain HTY-2CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>KX590714 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain HTY-3CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>KX590715 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain HTY-4CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>KX609700 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain HTY-6CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>KX609701 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain HTY-7CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>KX609702 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain HTY-8CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>KX609703 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain HTY-9CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MG640111 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain KRK-34VS-TR2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MG640112 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain KRK-37VS-TR2016 nucleocapsid protein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>KC139376 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain Na1 isolate Na1-CNS N protein and Nss protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGCGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KC139379 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain Na2 isolate Na2-CNS N protein and Nss protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KF314813 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain NO/13/04/7678 segment S nucleocapsid protein and non-structural protein genes, partial cds
+--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KX384858 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain SBV-Hun1 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>KX384861 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain SBV-Hun2 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KX384864 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain SBV-Hun3 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>KX384867 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain SBV-Hun4 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>KX384870 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain SBV-Hun5 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACGC
+>KX384876 SeroGr:Simbu Clade:B specie:Sathuperi subspc:Schmallenberg Schmallenberg virus strain SBV-Hun7 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+AUUCAUUUUCGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>AB542965 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus genes for N protein, NSs protein, complete cds, strain: KSB-1/P/06
+AUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB542964 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus genes for N protein, NSs protein, complete cds, strain: ON-1/P/05
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUCGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB542963 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus genes for N protein, NSs protein, complete cds, strain: ON-10/E/01
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB542962 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus genes for N protein, NSs protein, complete cds, strain: OYE-56-8
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH734992 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus isolate cs245 segment S polymerase gene, complete cds
+AUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH734993 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus isolate cs322 segment S polymerase gene, complete cds
+AUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAU-GGGCACCAGC-UCAACUUCGAUGUUGCUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH734994 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus isolate cs347 segment S polymerase gene, complete cds
+AUUCAUUUUUCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KF676999 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus isolate YL-1/PEA/C/12/TW nucleocapsid protein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083682 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus isolate YL-1/PEA/C/13/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083684 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus isolate YL-1/PEA/C/15/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083683 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus isolate YL-2/PEA/C/13/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>NC_043549 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus N and NSs genes, segment S, genomic RNA, isolate CSIRO 110
+AUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>HE795095 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus N and NSs genes, segment S, genomic RNA, isolate CSIRO 110
+AUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB568273 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus N gene for nucleocapsid, partial cds
+------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH331909 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus nucleocapsid protein (N) and non-structural protein (NSs) genes, partial cds
+------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AF362401 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus strain CSIRO 110 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+AUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH484320 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus strain CSIRO 110 segment S, complete sequence
+AUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AY048678 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus strain CSIRO110 nucleoprotein and non-structural protein genes, complete cds
+AUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAU-GGGCCCCAGC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AY048679 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus strain MZ-4/C/99 nucleoprotein and non-structural protein genes, complete cds
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AY048680 SeroGr:Simbu Clade:B specie:Shamonda subspc:Peaton Peaton virus strain NS-3/P/99 nucleoprotein and non-structural protein genes, complete cds
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUAGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>LC198185 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda orthobunyavirus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KS-1/P/15
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC198186 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda orthobunyavirus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KS-2/P/15
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>LC198187 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda orthobunyavirus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KSB-1/C/15
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>MH999471 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda orthobunyavirus strain Shamonda#1Vero_21:01:94 nucleocapsid protein and NSs genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>HE795107 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda virus N and NSs genes, segment S, genomic RNA, isolate Ib An 5550
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>AB183278 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain:KSB-6/C/02 
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>AB183279 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain:MZ-3/P/02 
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>AB183282 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain:MZ-6/P/02 
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>AB183283 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain:MZ-7/P/02 
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>AB698470 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: ON-3/P/07, segment S
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>AF362404 SeroGr:Simbu Clade:B specie:Shamonda subspc:Shamonda Shamonda virus strain An5550 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAAGGUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGGGUUGCUAAAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGGACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUUACAC
+>MH734979 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate B7974 segment S polymerase gene, complete cds
+AUUCAUUUUUCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH734984 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate cs1068 segment S polymerase gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCCUCACUC
+>MH734985 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate cs1574 segment S polymerase gene, complete cds
+AUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCCAUCACAC
+>MH734980 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate cs276 segment S polymerase gene, complete cds
+AUUCAUUUUUCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH734981 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate cs296 segment S polymerase gene, complete cds
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH734986 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate cs378 segment S polymerase gene, complete cds
+AUUCAUUUUUCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH734982 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate cs655 segment S polymerase gene, complete cds
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGCUAUGUGGCAUUUAUUGCUAAACAUAGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACCC
+>MH734983 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate cs990 segment S polymerase gene, complete cds
+AUUCAUUUUUCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MF083626 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate CY-1/AI/C/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083643 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate KH-1/AI/C/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083644 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate KH-2/AI/C/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083642 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate PT-1/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083633 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate TN-1/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083647 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate TN-1/AI/M/15/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083634 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate TN-2/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083635 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate TN-3/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083636 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate TN-4/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083637 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate TN-5/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083638 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate TN-6/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083639 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate TN-7/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083640 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate TN-8/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083641 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate TN-9/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083618 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-1/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083627 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-1/AI/C/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>KF676998 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-1/AINO/C/12/TW nucleocapsid protein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083619 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-2/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083628 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-2/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083620 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-3/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083629 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-3/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083621 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-4/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083630 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-4/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083622 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-5/AI/M/13/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083631 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-5/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083623 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-6/AI/M/13/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083632 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-6/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083624 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-7/AI/M/13/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083645 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-7/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083625 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-8/AI/M/13/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>MF083646 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus isolate YL-8/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>HE795089 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N and NSs genes, segment S, genomic RNA, isolate 38K
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AGUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB334154 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: B7974
+AUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUUGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB334173 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: HG-1/B/95
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB334174 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: HG-2/B/95
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB334178 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: KS-1/P/98
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB334155 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: KSB-2/C/86
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB334176 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: KSB-3/P/95
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB334164 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: MZ-1/P/88
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB334168 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: ON-2/B/88
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB334180 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: SG-2/E/02
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AB334177 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: YG-3/P/98
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AINSRNA SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus S protein and N protein RNA
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAUUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AGUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH484278 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus strain JaNAr 28 segment S, complete sequence
+AUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AGUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>DQ993247 SeroGr:Simbu Clade:B specie:Shuni subspc:Aino Aino virus strain KSA 9910 S protein mRNA, partial cds
+----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUUACUC
+>MH484299 SeroGr:Simbu Clade:B specie:Shuni subspc:Kaikalur Kaikalur virus strain VRC 713423-2 segment S, complete sequence
+AUUUAUUUUUCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>AF362394 SeroGr:Simbu Clade:B specie:Shuni subspc:Kaikalur Kaikalur virus strain VRC713423-2 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+UUUUAUUUUUCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MF361846 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni orthobunyavirus isolate ISR-129/16 segment S, complete sequence
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MF361852 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni orthobunyavirus isolate ISR-2067/16 segment S, complete sequence
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MF361855 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni orthobunyavirus isolate ISR-2162/16 segment S, complete sequence
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MF361849 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni orthobunyavirus isolate ISR-242/16 segment S, complete sequence
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH999473 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni orthobunyavirus strain Shuni#2BHK#2Vero_22:05:98 nucleocapsid protein and NSs genes, complete cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACCC
+>KU937313 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus isolate 2504/3/14 segment S, complete sequence
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>JQ726395 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus isolate MVA1110 nucleoprotein-like gene, partial sequence
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>JQ726398 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus isolate MVA3510 nucleoprotein gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>JQ726397 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus isolate MVA4310 nucleoprotein-like gene, partial sequence
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>HQ610143 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus isolate SAE10910 nucleoprotein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>HQ610137 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus isolate SAE1809 nucleoprotein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>HQ610139 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus isolate SAE2710 nucleoprotein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>HQ610140 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus isolate SAE3810 nucleoprotein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>HQ610141 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus isolate SAE3910 nucleoprotein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>HQ610138 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus isolate SAE7209 nucleoprotein (N) gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>HE800143 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus N and NSs genes, segment S, genomic RNA, isolate Ib An 10107
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACCC
+>AF362405 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain An10107 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+GUUUAUUUUCCAAAAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACCC
+>KC525996 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain SAE1511 nucleocapsid gene, partial cds
+-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
+>NC_043698 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain SAE1809 nucleocapsid and nonstructural protein genes, complete cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900859 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/215/14 nucleocapsid protein gene, partial cds
+-UUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900872 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/2417/1/14 nucleocapsid protein gene, complete cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900877 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/2504/1/14 nucleocapsid protein gene, partial cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UAAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACAUUGCCCUCACUC
+>KP900878 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/2504/2/14 nucleocapsid protein gene, complete cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900883 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/2504/3/14 isolate 2504/3/14 m nucleocapsid protein gene, complete cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900882 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/2504/3/14 isolate 2504/3/14 v nucleocapsid protein gene, partial cds
+-UUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900860 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/263/14 nucleocapsid protein gene, complete cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGURGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACURGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900861 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/267/2/14 nucleocapsid protein gene, partial cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900862 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/267/4/14 nucleocapsid protein gene, partial cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900865 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/273/14 nucleocapsid protein gene, partial cds
+------------------------------------------------------------------------------------------------------CGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900867 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/274/14 nucleocapsid protein gene, complete cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUAGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900870 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/275/1/14 isolate 275/1/14 m nucleocapsid protein gene, partial cds
+-----------------------------------------------------------------------------------------------------------CCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900869 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/275/1/14 nucleocapsid protein gene, partial cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KP900871 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain Shuni/275/2/14 nucleocapsid protein gene, partial cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KT946780 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain SHUV/ISR-2417/2/14 nucleocapsid protein and nonstructural protein genes, complete cds
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUWGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>KT946781 SeroGr:Simbu Clade:B specie:Shuni subspc:Shuni Shuni virus strain SHUV/ISR-2504/3/14 nucleocapsid protein gene, partial cds; and nonstructural protein-like gene, complete sequence
+GUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH999475 SeroGr:Simbu Clade:B specie:Simbu subspc:Simbu Simbu orthobunyavirus strain Ar53#2BHK_02:02:96 nucleocapsid protein gene, partial cds; and NSs gene, complete cds
+----AUUUUUGAGGAUGUACCU-CAACGGAACUUAUCUACAUUUAGUCCGGAGGCAGGGUAUGUGGCAUUUAUUGGUCGGUAU-GGGCAACAAC-UUAACUUCAGUGUUGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAA-----UGUUGAUCUUACUUUUGGAGGGG---UCA--AAUUUACACUGGUUAAUAACAAUUUUCCCCAAUAC-ACAGCUAAUCCGGUGCCAGACAAUGCCCUCACCC
+>HE795110 SeroGr:Simbu Clade:B specie:Simbu subspc:Simbu Simbu virus N and NSs genes, segment S, genomic RNA, isolate SA Ar 53
+AUUCAUUUUUGAGGAUGUACCU-CAACGGAACUUAUCUACAUUUAGUCCGGAGGCAGGGUAUGUGGCAUUUAUUGGUCGGUAU-GGGCAACAAC-UUAACUUCAGUGUUGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAA-----UGUUGAUCUUACUUUUGGAGGGG---UCA--AAUUUACACUGGUUAAUAACAAUUUUCCCCAAUAC-ACAGCUAAUCCGGUGCCAGACAAUGCCCUCACCC
+>AF362397 SeroGr:Simbu Clade:B specie:Simbu subspc:Simbu Simbu virus strain SA Ar53 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+AUUCAUUUUUGAGGAUGUACCU-CAACGGAACUUAUCUACAUUUAGUCCGGAGGCAGGGUAUGUGGCAUUUAUUGGUCGGUAU-GGGCAACAAC-UUAACUUCAGUGUUGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAA-----UGUUGAUCUUACUUUUGGAGGGG---UCA--AAUUUACACUGGUUAAUAACAAUUUUCCCCAAUAC-ACAGCUAAUCCGGUGCCAGACAAUGCCCUCACCC
+>MH734995 SeroGr:Simbu Clade:B specie:Thimiri subspc:Thimiri Thimiri orthobunyavirus isolate cs0001 segment S polymerase gene, complete cds
+AUUCAUUUUUCAAGAUGUUCCU-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUACUGCUAAAUAUGGGGCC-CAAC-UCACUGUUGAUACAGCUCGAGUGUUCUUCCUCAAUCAGAAGCGCGCCAAGGAUCGUC-UCCGUCAGACGUCGCAACCAGU-----UGUCGAUCUUACAUUUAACAAGCACGUC-----UUUCGAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCUGUGCCAGACACUGCCCUCACUC
+>MH484338 SeroGr:Simbu Clade:B specie:Thimiri subspc:Thimiri Thimiri orthobunyavirus strain VRC 66414 segment S, complete sequence
+GUUUGUAUUCGACGAUGUACCU-CAACGGACUACAUCUACAUUUGAUCCGGAGAAAGCAUAUGUGGCAUUUGAAGCUGCACAC-GGACAAGCUC-UCACUGUUGACACAGCUCGAGUGUUCUUCCUCAAUCAAAAGCGCGCCAAGGAUCGUC-UCCGUCAGACGUCGCAACCAGU-----UGUCGAUCUUACAUUUAACAAGCACGUC-----UUUCGAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCAAACCCGGUUGGUGAUGCAGACCUUACCC
+>MH507156 SeroGr:Simbu Clade: specie:Balagodu subspc:Balagodu Balagodu virus strain PB1 segment S, complete sequence
+GAUUGUUUUCAAUGAUGUACCU-CAACGGGCUCAAUCUACAUUUGAUCCGGAGGCGCAAUAUGUGGCAUUUGAAAAUACAUACCGAGCA--AACCUCACUGUUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----UGUCAAUCUUACUUUUGGGCAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCAAAUCCGGUUGCUGAUACAGCCCUUACCC
diff --git a/ThDy/sequences/Virus/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu - serogroup -S.711.sequence alignment.fasta b/ThDy/sequences/Virus/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu - serogroup -S.711.sequence alignment.fasta
new file mode 100644
index 0000000..86f2cb8
--- /dev/null
+++ b/ThDy/sequences/Virus/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu - serogroup -S.711.sequence alignment.fasta	
@@ -0,0 +1,10665 @@
+>HE795110 Simbu virus N and NSs genes, segment S, genomic RNA, isolate SA Ar 53
+--------------------------------------------------------------------------------
+------CUCCACUAUUAACUAUAU-----UAUUAA-------AUGGC------AAACCAAUUCAUUUUUGAGGAUGUACC
+U-CAACGGAACUUAUCUACAUUUAGUCCGGAGGCAGGGUAUGUGGCAUUUAUUGGUCGGUAU-GGGCAACAAC-UUAACU
+UCAGUGUUGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAA-----U
+GUUGAUCUUACUUUUGGAGGGG---UCA--AAUUUACACUGGUUAAUAACAAUUUUCCCCAAUAC-ACAGCUAAUCCGGU
+GCCAGACAAUGCCCUCACCCUCCACAGGCUCUCUGGAUAUCUAGCUAGAUGGAC---AGCAGAGCAAGUUAA---GAACA
+AU---CAAGUGAAACUUGCUGAAGCUACUGCUGCAAUUGUU-AUGCCUCUGGCUGAAGUCAAAGGAUGCACCUGGAAUGA
+UGGCUAUACCAUGUAUCUUGGAUUUGCACCAGGAGCGGAAAUGUUUCUAGAG-ACA--UUUGAAUUUUUCCCUCUUGUCA
+UCGAUAUGCAUAGAGUUUUAAAAGAUGGCAUGGAUGUAAACUUUAUGCGGAAAGCUCUUCGCCAGAGGUAUGGGCUGCUU
+ACUGCAGAACAAUGGAUGACUCAAAAGAUUGUUGAAG-UCAAAGCAGCAUUCGAUGCAGUUGGGCAAAUAGCUUGGGCU-
+AAAUCUGGCUUCUCCCCUGCUGCUAGAG-CCUUCCUGCAGCAGUUUGGUAUCACUGUGUAAACUUUCCAAAAAAUCU--U
+AUCAUCCUCUCAUUUUCAUCCUUUCACUUCCUAGUACAACAUGUCUAUGUGUUGUACGCCAUUUCAGCAGCUUGUAUCUU
+CAUUAUCUGUAUAGUUAAUUAGUGGAGCACACUACUG-------------------------------------------
+---------------------------------------------------------------
+>AF362397 Simbu virus strain SA Ar53 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CUAUUAACUAUAUUAUUAA----------A-------------UGGC------AAACCAAUUCAUUUUUGAGGAUGUACC
+U-CAACGGAACUUAUCUACAUUUAGUCCGGAGGCAGGGUAUGUGGCAUUUAUUGGUCGGUAU-GGGCAACAAC-UUAACU
+UCAGUGUUGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAA-----U
+GUUGAUCUUACUUUUGGAGGGG---UCA--AAUUUACACUGGUUAAUAACAAUUUUCCCCAAUAC-ACAGCUAAUCCGGU
+GCCAGACAAUGCCCUCACCCUCCACAGGCUCUCUGGAUAUCUAGCUAGAUGGAC---AGCAGAGCAAGUUAA---GAACA
+AU---CAAGUGAAACUUGCUGAAGCUACUGCUGCAAUUGUU-AUGCCUCUGGCUGAAGUCAAAGGAUGCACCUGGAAUGA
+UGGCUAUACCAUGUAUCUUGGAUUUGCACCAGGAGCGGAAAUGUUUCUAGAG-ACA--UUUGAAUUUUUCCCUCUUGUCA
+UCGAUAUGCAUAGAGUUUUAAAAGAUGGCAUGGAUGUAAACUUUAUGCGGAAAGCUCUUCGCCAGAGGUAUGGGCUGCUU
+ACUGCAGAACAAUGGAUGACUCAAAAGAUUGUUGAAG-UCAAAGCAGCAUUCGAUGCAGUUGGGCAAAUAGCUUGGGCU-
+AAAUCUGGCUUCUCCCCUGCUGCUAGAG-CCUUCCUGCAGCAGUUUGGUUUCACUGGGUAA---CUUUCCAAAAAAUCUU
+AUCAUCCUCUCAUUUUCAUCCUUUCACUUCCUAGUACAACAUGUCUAUGUGUUGUACGCCAUUUCAGCAGCUUGUAUCUU
+CAUUAUCUGUAUAGUUAAAUAGUGGAGUACACUAC---------------------------------------------
+---------------------------------------------------------------
+>MH999475 Simbu orthobunyavirus strain Ar53#2BHK_02:02:96 nucleocapsid protein gene, partial cds; and NSs gene, complete cds
+--------------------------------------------------------------------------------
+---------------------------------------------------------------AUUUUUGAGGAUGUACC
+U-CAACGGAACUUAUCUACAUUUAGUCCGGAGGCAGGGUAUGUGGCAUUUAUUGGUCGGUAU-GGGCAACAAC-UUAACU
+UCAGUGUUGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAA-----U
+GUUGAUCUUACUUUUGGAGGGG---UCA--AAUUUACACUGGUUAAUAACAAUUUUCCCCAAUAC-ACAGCUAAUCCGGU
+GCCAGACAAUGCCCUCACCCUCCACAGGCUCUCUGGAUAUCUAGCUAGAUGGAC---AGCAGAGCAAGUUAA---GAACA
+AU---CAAGUGAAACUUGCUGAAGCUACUGCUGCAAUUGUU-AUGCCUCUGGCUGAAGUCAAAGGAUGCACCUGGAAUGA
+UGGCUAUACCAUGUAUCUUGGAUUUGCACCAGGAGCGGAAAUGUUUCUAGAG-ACA--UUUGAAUUUUUCCCUCUUGUCA
+UCGAUAUGCAUAGAGUUUUAAAAGAUGGCAUGGAUGUAAACUUUAUGCGGAAAGCUCUUCGCCAGAGGUAUGGGCUGCUU
+ACUGCAGAACAAUGGAUGACUCAAAAGAUUGUUGAAG-UCAAAGCAGCAUUCGAUGCAGUUGGGCAAAUAGCUUGGGCU-
+AAAUCUGGCUUCUCCCCUGCUGCUAGAG-CCUUCCUGCAGCAGUUUGGUAUCACUGUGUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB289320 Akabane virus genomic RNA, segment S, complete sequence, strain: Okayama2004
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACGCAUUGCA----------A-------------UGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+AU---CAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAAGCUUAACUGAUCCUCCAGU
+UUUCU--CUUCUUUUUUUCUUUUUUCCUUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAG-CUGCUUGGAU
+UUUAUUGUUUAUAGUUAAUUAGUGGAGAACACUACU--------------------------------------------
+---------------------------------------------------------------
+>AB968527 Akabane virus genomic RNA, segment S, complete sequence, strain: TS-C2
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACGCAUUGCA----------A-------------UGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+AU---CAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAGCUUAACUGAUUCUCCAGU
+UUUUCUUUUUUCUCUU------------CCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAG-CUGCUUGGAU
+UUUAUUGUUUAUAGUUAAUUAGUGGAGAACACUACU--------------------------------------------
+---------------------------------------------------------------
+>AB000851 Akabane virus genomic RNA, viral-complementary sequence of S RNA segment, complete sequence
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACGCAUUGCA----------A-------------UGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+AU---CAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAGCUUAACUGAUUCUCCAGU
+UUUUUCUUUUUUCUCU-----------UCCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAG-CUGCUUGGAU
+UUUAUUGUUUAUAGUUAAUUAGUGGAGCACACUACU--------------------------------------------
+---------------------------------------------------------------
+>LC217464 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KM-2/B/08
+--------------------------------------------------------------------------------
+----------------------UA-----ACUACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+AU---CAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAAGCUUAACUGAUCCUCCAGU
+UUUCU--CUUCUUUUUUUCUUUUUUCCUUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>LC217460 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: OY-1/P/08
+--------------------------------------------------------------------------------
+----------------------UA-----AUUACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UCACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+AU---CAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAAGCUUAACUGAUCCUCCAGU
+UUUCU--CUUCUUUUUUUCUUUUUUCCUUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>KR260714 Akabane virus strain JaLAB39 segment S, complete sequence
+---------------------------------------------------------------------AGUGAACUCCA
+CUAUUAACUACGCAUUGCA----------A-------------UGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+AU---CAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAUCUUAACUGAUUCUCCAGU
+UUUCUUUCUUCUCUUC---------C----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUU
+UUAUUGUUUAUAGUUAAUUAGUGGAGGACAC-------------------------------------------------
+---------------------------------------------------------------
+>HE795092 Douglas virus N and NSs genes, segment S, genomic RNA, isolate 93-6
+--------------------------------------------------------------------------------
+-----------------------U-----UCACUACUGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUU
+UCAGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGGG---UCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUCACACUCCACAGGAUGUCAGGAUACUUAGCGCGGUGGG---UAGCUGACA-CAUGCAA--AGCUA
+GUGUUC---UCAAACUAGCUGAAGCAAGUGCACAGAUUGUU-AUGCCUCUUGCUGAGGUUAAGGGCUGCACCUGGGCUGA
+UGGCUAUACAAUGUAUCUUGGAUUUGCACCUGGAGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUACCCACUGGUCA
+UUGAGAUGCAUAGAGUCCUCAAAGAUAAUAUGGAUGUGAACUUCAUGAAGAAAGUCCUUCGCCAACGUUACGGCACAAUG
+ACUGCAGAAGAAUGGAUGACUCAAAAAAUAACAGAAA-UAAAGGCAGCAUUCAAUUCUGUUGGGCAACUGGCUUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGCAUCAACAUCUAAACCUCUCCGUUAUAACCCU
+UUACUUUCCGUGCAAUAUG----UCUAUGUAUUGCACACCAUUAUACUGCAAAGCUUCUAUUAAAAUAGUUAAUAAGUGG
+AG------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC217466 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KSB-3/P/08
+--------------------------------------------------------------------------------
+------------------------UUACGCAUUGCA------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+AU---CAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAAGCUUAACUGAUCCUCCAGU
+UUUCU--CUUCUUUUUUUCUUUUUUCCUUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>LC217459 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: TT-1/E/08
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAAGCUUAACUGAUCCUCCAGU
+UUUCU--CUUCUUUUUUUCUUUUUUCCUUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>LC217469 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: HG-1/P/10
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAAGCUUAACUGAUCCUCCAGU
+UUUCU--CUUCUUUUUUUCUUUUUUUCUUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUU
+UUAUUGUUUAUAUUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>MH734985 Aino virus isolate cs1574 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUCACACUCCACAGGAUGUCAGGAUACUUAGCGCGGUGGG---UAGCUGACA-CAUGCAAA--GCUA
+GUGUUC---UCAAGCUGGCUGAAGCAAGUGCACAGAUUGUC-AUGCCUCUUGCUGAGGUUAAGGGCUGCACCUGGGCUGA
+UGGCUAUACAAUGUAUCUUGGAUUUGCACCUGGAGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUACCCACUGGUCA
+UUGAGAUGCAUAGAGUCCUCAAAGAUAAUAUGGAUGUGAAUUUCAUGAAGAAAGUCCUUCGCCAGCGUUACGGCACAAUG
+ACUGCAGAAGAAUGGAUGACUCAAAAAAUAACAGAAA-UAAAGGCAGCAUUCAAUUCUGUUGGGCAACUGGCUUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGCAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF362393 Douglas virus strain CSIRO 150 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+------------------------------------------------------------------AGUAGUGUNCUCCA
+CUAUUAACUACUGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUU
+UCAGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUCACACUCCACAGGAUGUCAGGAUACUUAGCGCGGUGGG---UAGCUGACA-CAUGCAAA--GCUA
+GUGUUC---UCAAACUAGCUGAAGCAAGUGCACAGAUUGUU-AUGCCUCUUGCUGAGGUUAAGGGCUGCACCUGGGCUGA
+UGGCUAUACAAUGUAUCUUGGAUUUGCACCUGGAGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUACCCACUGGUCA
+UUGAGAUGCAUAGAGUCCUCAAAGAUAAUAUGGAUGUGAACUUCAUGAAGAAAGUCCUUCGCCAACGUUACGGCACAAUG
+ACUGCAGAAGAAUGGAUGACUCAAAAAAUAACAGAAA-UAAAGGCAGCAUUCAAAUUCGUUGGGCAACUGGCUUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGUAAGA-ACUUUCUUGCAGGAAUUCGGUAUCAACAUCUAAACCUCUCCGUUAUAACCCU
+UUACUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAAGCUUCUANAAAAAUAGUUAAUAUGUGG
+AGCCACACUACU--------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000819 Tinaroo virus RNA for two overlapping orfs, complete cds
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACGCAUUGCA------A-----------------UGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGGUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCC-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAAUCUUAACUGAUUCUCCAGU
+CUUCUGUCUUCUCUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCAUACCUUUAUUCAGCUGCUUGGAUU
+UUAUUGUUUAUAGUUAAUUAGUGGAGCACACUACU---------------------------------------------
+---------------------------------------------------------------
+>KU375444 Akabane virus strain NM/BS/1 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACUCAUUGCA------A-----------------UGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGACGGGAUGGAUGUCAACUUCAUGAGGAAAGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUACAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGU
+UUUCUUACUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCGGAUU
+UUAUUGUUUAUAGUUAAUUAGUGGAGCACACUACU---------------------------------------------
+---------------------------------------------------------------
+>MH734987 Douglas virus isolate cs400 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUCACACUCCACAGGAUGUCAGGAUACUUAGCGCGGUGGG---UAGCUGACA-CAUGCAAA--GCUA
+GUGUUC---UCAAGCUGGCUGAAGCAAGUGCACAGAUUGUC-AUGCCUCUUGCUGAGGUUAAGGGCUGCACCUGGGCUGA
+UGGCUAUACAAUGUAUCUUGGAUUUGCACCUGGAGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUACCCACUGGUCA
+UUGAGAUGCAUAGAGUCCUCAAAGACAAUAUGGAUGUGAAUUUCAUGAAGAAAGUCCUUCGCCAGCGUUACGGCACAAUG
+ACUGCAGAAGAAUGGAUGACUCAAAAAAUAACAGAAA-UAAAGGCAGCAUUCAAUUCUGUUGGGCAACUGGCUUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGCAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734984 Aino virus isolate cs1068 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCCUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAA
+A---CCAGAUAAAAUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGA
+AGGACUAACUAUGUAUUUAGGUUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUA
+UUGAUAUGCAUAGAGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUG
+ACUGCAGAGCAAUGGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB289319 Akabane virus genomic RNA, segment S, complete sequence, strain: Okayama2001
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACGCAUUGCA------A-----------------UGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCAGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAAAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGACCUAAUCUUUGCUGAUUCUCCAGU
+UUCCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUAGUGGAGAACACUACU---------------------------------------------
+---------------------------------------------------------------
+>AB232240 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-3F97
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232228 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KS-94P97
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734988 Douglas virus isolate cs1059 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUU
+UCAGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUGCAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUCACACUCCACAGGAUGUCAGGAUACUUAGCGCGGUGGG---UAGCUGACA-CAUGCAAA--GCUA
+GUGUUC---UCAAGCUAGCUGAAGCAAGUGCACAGAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGA
+AGGACUAACUAUGUAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUA
+UUGAUAUGCAUAGAGUACUAAAAGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUG
+ACUGCAGAAGAAUGGAUGACUCAAAAAAUAACAGAAA-UAAAGGCAGCAUUCAAUUCUGUUGGGCAACUGGCUUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGCAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH484350 Yaba-7 virus strain Yaba 7 segment S, complete sequence
+----------------------------------------------------------------GUAGUAGUGAACUCCA
+CUAUUAACUACUUAUUGCA------A-----------------UGGC------AAAUCAAUUUGUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGACACGGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACU
+UUUCUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAAGCCAA-GAUGGUCCUACAUAAGACGCCACAACCGAG-----U
+GUCGAUCUUACAUUUGCUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUACAGU
+GUCAGACACUGCCUUUACCCUCCACCGCAUCUCAGGGUAUCUAGCAAGAUGGG---UUGCUGAGC-AAUGCAA--GGGCA
+A---CCAGAUUAAGCUAGCUGAGGCAGCUGCGACUAUUGUU-AUGCCACUGGCUGAGAUCAAGGGCUGCACAUGGAAUGA
+UGGUUAUACCAUGUAUCUGGGUUUCGCUCCUGGGGCAGAAAUGUUCCUAGAG-ACC--UUUGAGUUCUACCCACUUGUCA
+UAGACAUGCAUCGCGUCUUAAAAGACGGAAUGGAUGUGAACUUCAUGAGAAAGGUCUUACGCCAGAGAUAUGGUCAGCUC
+ACAGCGGAAGAAUGGAUGACAACUAAGGUUGAUGCAG-UGAAGGCAGCAUUUGGAUCUGUUGCCCAGAUAUCUUGGGCC-
+AAAUCCGGAUUCUCCCCUGCAGCACGUG-CUUUCCUUACUCAGUUUGGCAUCCAGAUCUAGGCACCUCUUCCAGUCUUUU
+CCUAAUUUUCCCUCUUAGUGUACCAUGUCUAUGUGGUACACGCCAUUUCAGCAGUAUUGAUUCUUCAUUCAUAGUUAAUU
+AGUGGAGAACACUAC-----------------------------------------------------------------
+---------------------------------------------------------------
+>MH484341 Tinaroo virus strain CSIRO 153 segment S, complete sequence
+----------------------------------------------------------------GUAGUAGUGAACUCCA
+CUAUUAACUACGCAUUGCA------A-----------------UGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGGUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCC-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAAUCUUAACUGAUUCUCCAGU
+CUUCUGUCUUCUCUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCAUACCUUUAUUCAGCUGCUUGGAUU
+UUAUUGUUUAUAGUUAAUUAGUGGAGAACA--------------------------------------------------
+---------------------------------------------------------------
+>AB000854 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---CCAGAUCAAACUUGCUGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGA
+UGGGUAUGCAAUGUAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGGUGAAGGAUGGAAUGGAUGUCAACUUUAUGAGGAAAGUGCUACGCCAGAGAUAUGGGCAGUUA
+ACUGCUGAGGAGUGGAUGACAUCAAAGUUGGACGCAG-UCAAAGCUGCAUACGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAGUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000853 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GUCCA
+A---CCAGAUCAAACUUGCUGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGA
+UGGGUAUGCAAUGUAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGGUGAAGGAUGGAAUGGAUGUCAACUUUAUGAGGAAAGUACUACGCCAGAGAUAUGGGCAGUUA
+ACUGCUGAGGAGUGGAUGACAUCAAAGUUGGACGCAG-UCAAAGCUGCAUACGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAGUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY284023 Akabane virus strain DHL10M110 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACGCAUUGCA------A-----------------UGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAAUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAAAUCAAGCUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUCUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGACGGAAUGGAUGUUAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGU
+UUUUUCUUACUUCUAU-----------UUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCGGAUU
+UUAUUGUUUAUAGUUAAUUAGUGGAGCACACUACU---------------------------------------------
+---------------------------------------------------------------
+>AB232245 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KT-1S98
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCAGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232196 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: YG-88-2
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000864 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734940 Akabane virus isolate B8935 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GUCCA
+A---CCAGAUCAAACUUGCUGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGA
+UGGGUAUGCAAUGUAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGGUGAAGGAUGGAAUGGAUGUCAACUUUAUGAGGAAAGUACUACGCCAGAGAUAUGGGCAGUUA
+ACUGCUGAGGAGUGGAUGACAUCAAAGUUGGACGCAG-UCAAAGCUGCAUACGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAGUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF362392 Yaba-7 virus strain Y-7 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CUAUUAACUACUUAUUGCA------A-----------------UGGC------AAAUCAAUUUGUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGACACGGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACU
+UUUCUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAAGCCAA-GAUGGUCCUACAUAAGACGCCACAACCGAG-----U
+GUCGAUCUUACAUUUGCUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUACAGU
+GUCAGACACUGCCUUUACCCUCCACCGCAUCUCAGGGUAUCUAGCAAGAUGGG---UUGCUGAGC-AAUGCAA--GGGCA
+A---CCAGAUUAAGCUAGCUGAGGCAGCUGCGACUAUUGUU-AUGCCACUGGCUGAGAUCAAGGGCUGCACAUGGAAUGA
+UGGUUAUACCAUGUAUCUGGGUUUCGCUCCUGGGGCAGAAAUGUUCCUAGAG-ACC--UUUGAGUUCUACCCACUUGUCA
+UAGACAUGCAUCGCGUCUUAAAAGACGGAAUGGAUGUGAACUUCAUGAGAAAGGUCUUACGCCAGAGAUAUGGUCAGCUC
+ACAGCGGAAGAAUGGAUGACAACUAAGGUUGAUGCAG-UGAAAGCAGCAUUUGGAUCUGUUGCCCAGAUAUCUUGGGCC-
+AAAUCCGGAUUCUCCCCUGCAGCACGUG-CUUUCCUUACUCAGUUUGGCAUCCAGAUCUAGGCACCUCUUCCAGUCUUUU
+CCUAAUUUUCCCUCUUAGUGUACCAUGUCUAUGUGAUACACGCCAUUUCAGCAGUAUUGAUUAUUCAUUCAUAGUUAAAU
+AGUGGAGUACACUACU----------------------------------------------------------------
+---------------------------------------------------------------
+>AB289321 Akabane virus genomic RNA, segment S, complete sequence, strain: Iriki
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACGCAUUGCA------A-----------------UGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGU
+UUCCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUU
+UUAUUGUUUAUAGUUAAUUAGUGGAGAACACUACU---------------------------------------------
+---------------------------------------------------------------
+>LC217486 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KSB-2/P/13
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UCACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAAA--GCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGACGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGU
+UUUCUUACUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>LC217483 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KM-1/B/13
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UCACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAAA--GCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGACGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGU
+UUUCUUACUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>AB232211 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-3E91
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAAUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUAAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232209 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1E91
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAAUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000867 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAAGCCAA-GAUGGUCUUACAUAAGACGUCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734959 Akabane virus isolate R7949 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---AUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GUCCA
+A---CCAGAUCAAACUUGCUGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGA
+UGGGUAUGCAAUGUAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGGUGAAGGAUGGAAUGGAUGUCAACUUUAUGAGGAAAGUACUACGCCAGAGAUAUGGGCAGUUA
+ACUGCUGAGGAGUGGAUGACAUCAAAGUUGGACGCAG-UCAAAGCUGCAUACGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAGUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734993 Peaton virus isolate cs322 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUCAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAU-GGGCACCAGC-UCAACU
+UCGAUGUUGCUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCGGGAUAUCUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAGAUAAAACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGCUGUACCUGGACUGA
+AGGCUAUACUAUGUAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUA
+UUGAUAUGCAUAGAGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUG
+ACUGCAGAGCAAUGGAUGACAUCAAAGUUGGACGCAG-UCAAAGCUGCAUACGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAGUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF034942 Akabane virus strain Obe-1 nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+--------------------------------------------------------------------------------
+----------------------------------GCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAGCUUAACUGAUUCUCCAGU
+UUUUUCUUUUUUCUCU-----------UCCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUU
+UUAUUGUUUAUA--------------------------------------------------------------------
+---------------------------------------------------------------
+>AF034939 Akabane virus strain Jagar-39 nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+--------------------------------------------------------------------------------
+-------------------------------UACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAUCUUAACUGAUUCUCCAGU
+UUUCUUUCUUCUCUUC--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUU
+UUAUUGUUUAUA--------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232218 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-2E94
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGAUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCAUCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAACUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGCUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232214 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-1C94
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUCA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734947 Akabane virus isolate CS710 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACGUUUAAUCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGUACUUGGAGUGA
+UGGGUAUGCAAUGUAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734941 Akabane virus isolate CS0016 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAACUUGCUGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGA
+UGGGUAUGCAAUGUAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGAUAUGGGCAGUUA
+ACUGCUGAGGAGUGGAUGACAUCAAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC217468 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: ON-1/E/10
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUGCAAUCGUC-AUGCCGCUGGCUGAAGUGAAAGGCUGCACAUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGU
+UUCCUUGAUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>AB232223 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-5E95
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGUCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGAUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCAUCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAACUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGCUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAAUCUGGCUUCUCGCCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232222 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-4P95
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGUCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGAUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCAUCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAACUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGCUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC217458 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: YG-1/Br/07
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUCCUGGAA-ACC--UUUGAAUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUA
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGAUGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGU
+UUCCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>LC217470 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: ON-5/E/10
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUGCAAUCGUC-AUGCCGCUGGCUGAAGUGAAAGGCUGCACAUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGU
+UUCCUUGAUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>KX384864 Schmallenberg virus strain SBV-Hun3 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+---------------------------------------------------------------------------CUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUUGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCU---------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP731867 Schmallenberg virus isolate D495/12-1 segment S nucleocapsid protein (N) and nonstructural protein (N) genes, complete cds
+---------------------------------------------------------------------------CUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGGCAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGG
+AGAACACUACU---------------------------------------------------------------------
+---------------------------------------------------------------
+>KC139379 Schmallenberg virus strain Na2 isolate Na2-CNS N protein and Nss protein genes, complete cds
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGG
+AGAACACUACU---------------------------------------------------------------------
+---------------------------------------------------------------
+>HE795104 Sathuperi virus N and NSs genes, segment S, genomic RNA
+------------------------------------------------------CUGACAUAUUUCAGUAGUUAAUAGUG
+GAAUACACUACUGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUCACACUUCACAGGAUGUCGGGAUAUCUAGCGCGAUGGG---UUGCUGACA-CAUGCAA--GGCUA
+GU-GUCC--UUAAGUUGGCUGAAGCAAGUGCUCAGAUUGUC-AUGCCUCUUGCUGAAGUUAAAGGUUGCACUUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUCGCACCUGGGGCAGAAAUGUUCCUUGAU-GCU--UUUGACUUCUACCCACUGGUUA
+UCGAGAUGCACAGGGUUCUCAAAGAUAAUAUGGAUGUAAAUUUCAUGAAAAAAGUCCUUCGCCAGCGCUACGGAACAAUG
+ACUGCAGAAGAAUGGAUGACUCAAAAAAUAACAGAAA-UUAAGGCUGCGUUCAACUCCGUUGGACAACUUGCUUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCCAGA-ACUUUCUUGCAGCAAUUUGGUAUCAACAUCUAAACCUCUCCAUUACAAACUC
+UUAAAUUUCCGUGCAAUAUGUCU---AUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUGAGAUAGUUAAUAAGUGG
+AG------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF362403 Sathuperi virus strain I-11155 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUCACACUUCACAGGAUGUCGGGAUAUCUAGCGCGAUGGG---UUGCUGACA-CAUGCAA--GGCUA
+GU-GUCC--UUAAGUUGGCUGAAGCAAGUGCUCAGAUUGUC-AUGCCUCUUGCUGAAGUUAAAGGUUGCACUUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUCGCACCUGGGGCAGAAAUGUUCCUUGAU-GCU--UUUGACUUCUACCCACUGGUUA
+UCGAGAUGCACAGGGUUCUCAAAGAUAAUAUGGAUGUAAAUUUCAUGAAAAAAGUCCUUCGCCAGCGCUACGGAACAAUG
+ACUGCAGAAGAAUGGAUGACUCAAAAAAUAACAGAAA-UUAAGGCUGCGUUCAACUCCGUUGGACAACUUGCUUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCCAGA-ACUUUCUUGCAGCAAUUUGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000858 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAGCUUA--------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB373234 Akabane virus S segment N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: KS-1/P/06
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCAUUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGU
+UUUCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>AB000855 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000852 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY381272 Akabane virus strain GXLCH02 segment S nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------UGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGGUCAAACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUAUCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGACGGGAUGGAUGUCAACUUCAUGCGGAAAGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGU
+UUUCUUACUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCG----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB698468 Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: OI-3/P/07, segment S
+--------------------------------------------------------------------------------
+-----------------------------UAACUACUGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUCACACUUCACAGGAUGUCGGGAUAUCUAGCACGAUGGG---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UUAAGUUGGCUGAAGCAAGUGCUCAGAUUGUC-AUGCCUCUUGCUGAAGUUAAAGGUUGCACUUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCAGGGGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUAUCCGCUGGUUA
+UUGAAAUGCACAGGGUUCUCAAAGACAAUAUGGAUGUAAAUUUCAUGAAAAAAGUCCUUCGCCAGCGCUAUGGAACAAUG
+ACUGCAGAAGAAUGGAUGACUCAAAAAAUAACAGAAA-UUAAGGCUGCAUUCAACUCUGUUGGACAGCUUGCUUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCCAGAG-CUUUCUUGCAGCAAUUCGGUAUUAACAUCUAAACCUCUCCGUUACAUACUC
+UUUAAUUUCCGUGCAAUAUGUCU---AUGUAUUGCACACCAUCAUACUGCAAGGCUUCUGUUGAAAUAGUUAAUAA----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB698467 Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: ON-1/P/06, segment S
+--------------------------------------------------------------------------------
+-----------------------------UAACUACUGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUCACACUUCACAGGAUGUCGGGAUAUCUAGCACGAUGGG---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UUAAGUUGGCUGAAGCAAGUGCUCAGAUUGUC-AUGCCUCUUGCUGAAGUUAAAGGUUGCACUUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCAGGGGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUAUCCGCUGGUUA
+UCGAAAUGCACAGGGUUCUCAAAGACAAUAUGGAUGUAAAUUUCAUGAAAAAAGUCCUUCGCCAGCGCUAUGGAACAAUG
+ACCGCAGAAGAAUGGAUGACUCAAAAAAUAACAGAAA-UUAAGGCUGCAUUCAACUCUGUUGGACAGCUUGCUUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCCAGAG-CUUUCUUGCAGCAAUUCGGUAUUAACAUCUAAACCUCUCCGUUACAUACUC
+UUUAAUUUCCGUGCAAUAUGUCU---AUGUAUUGCACACCAUCAUACUGCAAGGCUUCUGUUGAAAUAGUUAAUAA----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>NC_043582 Schmallenberg virus isolate F6 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGG
+AGAACACUACU---------------------------------------------------------------------
+---------------------------------------------------------------
+>MH999470 Akabane orthobunyavirus strain Akabane#2Vero#3BHK_22:05:98 nucleocapsid protein gene, partial cds; and NSs gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------------------------------UUUCACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GUCCA
+A---CCAGAUCAAACUUGCUGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGA
+UGGGUAUGCAAUGUAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGGUGAAGGAUGGAAUGGAUGUCAACUUUAUGAGGAAAGUACUACGCCAGAGAUAUGGGCAGUUA
+ACUGCUGAGGAGUGGAUGACAUCAAAGUUGGACGCAG-UCAAAGCUGCAUACGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAGUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX384870 Schmallenberg virus strain SBV-Hun5 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+---------------------------------------------------------------------------CUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCU---------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX384867 Schmallenberg virus strain SBV-Hun4 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+---------------------------------------------------------------------------CUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCU---------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX384858 Schmallenberg virus strain SBV-Hun1 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+---------------------------------------------------------------------------CUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUACAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCU---------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC355456 Schmallenberg virus isolate HL1 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCAGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAGACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGG
+AGAACACUACU---------------------------------------------------------------------
+---------------------------------------------------------------
+>JX853181 Schmallenberg virus isolate Germany segment S, complete sequence
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGG
+AGAACACUACU---------------------------------------------------------------------
+---------------------------------------------------------------
+>HE649914 Schmallenberg virus genes for nucleocapsid protein and non-structural protein, segment S, genomic RNA, isolate BH80/11-4
+---------------------------------------------------------------------------CUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGG
+AGAACACUACU---------------------------------------------------------------------
+---------------------------------------------------------------
+>LC217480 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: EH-3/Br/11
+--------------------------------------------------------------------------------
+---------------------------UAANUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCAUCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCCUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAACUUUGCUGAUCCUCCAGU
+UUCCUUGCUUCUAUCU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>LC217478 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: EH-1/P/11
+--------------------------------------------------------------------------------
+------------------------------UUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCAUCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCCUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAACUUUGCUGAUCCUCCAGU
+UUCCUUGCUUCUAUCU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>LC217474 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: HS-1/Br/11
+--------------------------------------------------------------------------------
+---------------------------UAAUUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCAUCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCCUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAACUUUGCUGAUCCUCCAGU
+UUCCUUGCUUCUAUCU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>LC217472 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: OY-2/B/11
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCAUCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCCUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAACUUUGCUGAUCCUCCAGU
+UUCCUUGCUUCUAUCU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>MH734966 Akabane virus isolate CS241 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734960 Akabane virus isolate CS215 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCAUUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HE795107 Shamonda virus N and NSs genes, segment S, genomic RNA, isolate Ib An 5550
+------------------------------------------------------------------AGUAGUGAA-UCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGCUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGUACCUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUAUCCGCUAGUUA
+UCGAAAUGCAUAGGGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGG
+AGAACACUACUGCCCAGGCAUAGUUCACCAUCUUUCGGGUCCUAACGCAUGCGCUCGUGCUCCACCUCCCCGACGCGGUC
+GGGUCGUAGUACGGGCCGGU-------------------------------------------
+>AB426280 Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KSB-3/P/06
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAAUUUUACCCAUUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGU
+UUCCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>AB426271 Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KM-1/Br/06
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAAGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCAUUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGU
+UUCCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>DQ973189 Akabane virus strain K-9 nucleocapsid protein (N) and nonstructural protein (NS) mRNAs, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUCCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000857 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAAAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUUCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB698469 Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: KSB-2/C/08, segment S
+--------------------------------------------------------------------------------
+-----------------------------UAACUACUGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACU
+UCAGUGUUGCUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUCACACUUCACAGGAUGUCGGGAUAUCUAGCACGAUGGG---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UUAAGUUGGCUGAAGCAAGUGCUCAGAUUGUC-AUGCCUCUUGCUGAAGUUAAAGGUUGCACUUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCAGGGGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUAUCCGCUAGUUA
+UCGAAAUGCACAGGGUUCUCAAAGACAAUAUGGAUGUAAAUUUCAUGAAAAAAGUCCUUCGCCAGCGCUAUGGAACAAUG
+ACCGCAGAAGAAUGGAUGACUCAAAAAAUAACAGAAA-UUAAGGCUGCAUUCAACUCUGUUGGACAGCUUGCUUGGGCU-
+AAAUCUGGAUUCUCACCUGCCGCCAGAG-CUUUCUUGCAGCAAUUCGGUAUUAACAUCUAAACCUCUCCGUUACAUACUC
+UUUAAUUUCCGUGCAAUAUGUCU---AUGUAUUGCACACCAUCAUACUGCAAGGCUUCUGUUGAAAUAGUUAAUAA----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB334168 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: ON-2/B/88
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---UCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB125371 Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds
+--------------------------------------------------------------------------------
+-----------------------------UAACUACUGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACU
+UCGGUGUUGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUCACACUUCAUAGGAUGUCGGGAUAUCUAGCACGAUGGG---UUGCUGAUA-CGUGCAA--GGCUA
+GU-GUCC--UUAAGUUGGCUGAAGCAAGUGCUCAGAUUGUC-AUGCCUCUUGCUGAGGUUAAAGGUUGUACUUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUCGCACCAGGGGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUACCCGCUGGUUA
+UCGAAAUGCACAGGGUUCUCAAAGACAAUAUGGAUGUAAAUUUCAUGAAAAAAGUCCUUCGCCAGCGCUAUGGAACAAUG
+ACUGCAGAAGAAUGGAUGACUCAAAAAAUAACAGAAA-UUAAGGCUGCGUUCAACUCUGUUGGACAGCUUGCUUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCCAGAG-CUUUCUUGCAGCAAUUUGGUAUUAACAUCUAAACCUCUCCGUUACACACUC
+UUAAAUUUCCGUGCAAUAUGUCU---AUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUGAAAUAGUUAAUAA----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309149 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 838/Cumbria/2017
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCUGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX384876 Schmallenberg virus strain SBV-Hun7 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+---------------------------------------------------------------------------CUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUCGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCU---------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX384861 Schmallenberg virus strain SBV-Hun2 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+---------------------------------------------------------------------------CUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCU---------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795141 Schmallenberg virus isolate W13-4-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGGACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC139376 Schmallenberg virus strain Na1 isolate Na1-CNS N protein and Nss protein genes, complete cds
+------------------------------------------------------------------AGUAGUGAACUCCA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGCGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGG
+AGAACACUACU---------------------------------------------------------------------
+---------------------------------------------------------------
+>KP731865 Schmallenberg virus isolate BH619/12 segment S nucleocapsid protein (N) and nonstructural protein (N) genes, complete cds
+------------------------------------------------------------------------------CA
+CUAUUAACUACAGAAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGG
+AGAACACUA-----------------------------------------------------------------------
+---------------------------------------------------------------
+>AY048678 Peaton virus strain CSIRO110 nucleoprotein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUCAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAU-GGGCCCCAGC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCGGGAUAUCUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAGAUAAAACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGCUGACUAUGUAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUA
+UCGACAUGCAUAGAGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUGCUCCGCCAACGUUAUGGUACAUUA
+ACUGCAGAGCAAUGGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAAACUUCUAAAAAAACCCCAC
+UCCCUCCCUAGUAUGGUGUU-----CCACAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUUUAUUGAUUGUU
+CUAU----------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734996 Tinaroo virus isolate cs153 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGGUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCC-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734969 Akabane virus isolate CS661 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734968 Akabane virus isolate CS506 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734967 Akabane virus isolate CS502 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734965 Akabane virus isolate CS236 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCAGGUGCUGAGAUGUUCCUUGAG-ACC--UUUGAGUUCUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734964 Akabane virus isolate CS235 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCAGGUGCUGAGAUGUUCCUUGAG-ACC--UUUGAGUUCUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734963 Akabane virus isolate CS233 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734962 Akabane virus isolate CS231 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734961 Akabane virus isolate CS228 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGGUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCC-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734957 Akabane virus isolate CS1798 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGGAUGCAAUGUACUUGGGAUUUGCCCCAGGGGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCAUUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734954 Akabane virus isolate CS1776 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUGGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUA
+UAGACAUGCACCGUGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734952 Akabane virus isolate CS1416 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCAUUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734946 Akabane virus isolate CS700 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCAUUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB373232 Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KS-2/Mo/06
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCAUUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGU
+UUCCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>AF034940 Akabane virus strain PT-17 nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+--------------------------------------------------------------------------------
+-------------------------------UACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGU
+UUCCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUU
+UUAUUGUUUAUA--------------------------------------------------------------------
+---------------------------------------------------------------
+>MH484278 Aino virus strain JaNAr 28 segment S, complete sequence
+-------------------------------------------------------------------GUAGUGUACUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AGUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGUAAA--ACGA
+A---UCAGAUUAAAUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUGGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGGCUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUUUUAGAA-ACA--UUUGAAUUCUACCCUUUGGUUA
+UUGAUAUGCACAGAGUGCUGAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUUCGCCAGCGCUACGGCACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCUAGAG-CCUUCCUUGCCCAAUUUGGCAUAAACAUCUAAAUUCCUGUAAAACCCCA--
+---CCCCUUCCCCCAGUAUGGUGUUCCAAAACACCAUACGCCAUUCCUGCAGCAUUGUUUAUUUCUUUCUAUUGAUUGUU
+CUAUGUGGAGCACA------------------------------------------------------------------
+---------------------------------------------------------------
+>HE795089 Aino virus N and NSs genes, segment S, genomic RNA, isolate 38K
+---------------------------------------------------------------------------CUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AGUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGUAAA--ACGA
+A---UCAGAUUAAAUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUGGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGGCUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUUUUAGAA-ACA--UUUGAAUUCUACCCUUUGGUUA
+UUGAUAUGCACAGAGUGCUGAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUUCGCCAGCGCUACGGCACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCUAGAG-CCUUCCUUGCCCAAUUUGGCAUAAACAUCUAAAUUCCUGUAAAACCCCA--
+---CCCCUUCCCCCAGUAUGGUGUUCCAAAACACCAUACGCCAUUCCUGCAGCAUUGUUUAUUUCUUUCUAUUGAUUGUU
+CUAUGUGGAGCAC-------------------------------------------------------------------
+---------------------------------------------------------------
+>FJ498795 Akabane virus isolate AK7 nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCGGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGU-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGCUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCGCUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB426272 Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KM-2/Br/06
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAAGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCAUUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGU
+UUCCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUU----------------------------------------------------------------------
+---------------------------------------------------------------
+>DQ973188 Akabane virus strain KV0505 nucleocapsid protein (N) and nonstructural protein (NS) mRNAs, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUCCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUCCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUACCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000862 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000860 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUCGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG731557 Akabane virus isolate HN10169 nucleoprotein mRNA, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGACGGGAUGGAUGUCAACUUCAUGAGGAAAGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUCCAAAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY381273 Akabane virus strain GXLCH04 segment S nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------UGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAACUUGCAGAGGCAGCUACUACAAUUGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGGUUCGCUCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGACGGGAUGGAUGUUAACUUCAUGAGGAAAGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCCAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGU
+UUUCUUACUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCG----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB334177 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: YG-3/P/98
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---UCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+GGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGUUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAACUAAGUUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB334164 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: MZ-1/P/88
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---UCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734953 Akabane virus isolate CS1711 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUAUUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278878 Akabane virus isolate YL-2/AKA/C/15/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY828205 Schmallenberg virus isolate PL_13_130-6_ovis nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309156 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 138/IsleofWight/2012
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAGAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309147 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 2179/Lancashire/2017
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309165 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1892/Oxfordshire/2012
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGAUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGGUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGAGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309161 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 901/Dorset/2012
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AUAUCC---UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAGAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795145 Schmallenberg virus isolate S12-1 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGUAA--GGCUA
+GU-GUCC--UUAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795135 Schmallenberg virus isolate W12-13 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309162 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1833/Devon/2012
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232319 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: CY-77
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232313 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-2E03
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUA
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY383717 Akabane virus nucleocapsid protein (N) mRNA, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734978 Akabane virus isolate DPP261 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGUACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCAGGUGCUGAGAUGUUCCUUGAG-ACC--UUUGAGUUCUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734977 Akabane virus isolate DPP240 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGUACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCAGGUGCUGAGAUGUUCCUUGAG-ACC--UUUGAGUUCUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734975 Akabane virus isolate DPP232 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGUACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCAGGUGCUGAGAUGUUCCUUGAG-ACC--UUUGAGUUCUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734955 Akabane virus isolate CS1777 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUA
+UAGACAUGCACCGUGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG731558 Akabane virus isolate HN10174 nucleoprotein mRNA, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUYAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGCUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGACGGGAUGGAUGUCAACUUCAUGAGGAAAGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC217482 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: ON-1/P/12
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCGGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGU
+UUCCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>AB426273 Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KM-3/Ce/06
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGCGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCAUUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGU
+UUCCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUU
+UUAUUGUUUAUAGUUAAUUA------------------------------------------------------------
+---------------------------------------------------------------
+>LC309145 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9594/Yorkshire/2017
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+RU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>FJ498797 Akabane virus isolate 93FMX nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACACCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGUUGAGGUGAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AINSRNA Aino virus S protein and N protein RNA
+------------------------------------------------------------------AGUAGUGUACUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAUUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AGUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGUAAA--ACGA
+A---UCAGAUUAAAUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUGGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGGCUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUUUUAGAA-ACA--UUUGAAUUCUACCCUUUGGUUA
+UUGAUAUGCACAGAGUGCUGAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUUCGCCAGCGCUACGGCACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCUAGAG-CCUUCCUUGCCCAAUUUGGCAUAAACAUCUAAAUUCCUGUAAAACCCCA--
+---CCCCUUCCCCCAGUAUGGUGUUCCAAAACACCAUACGCCAUUCCUGCAGCAUUGUUUAUUUCUUUCUAUUGAUUGUU
+CUAUGUGGAGCCACACUACU------------------------------------------------------------
+---------------------------------------------------------------
+>MH734981 Aino virus isolate cs296 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---UCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734958 Akabane virus isolate DPP231 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGAUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCUCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734950 Akabane virus isolate CS951 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGAUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCUCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY385908 Akabane virus strain GXLCH01 segment S nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------UGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAC-ACUGCAAACCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCUACAAUCGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGGUUCGCUCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGACGGGAUGGAUGUUAACUUCAUGAGGAAAGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGU
+UUUCUUACCUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCG----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY381274 Akabane virus strain GXLCH16-70 segment S nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------UGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACUUAGGGUUCGCUCCUGGUGCCGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGACGGGAUGGAUGUUAACUUCAUGAGGAAAGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGU
+UUUCUUACUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCG----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB334180 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: SG-2/E/02
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---UCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCCGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAACUAAGUUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB334178 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: KS-1/P/98
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---UCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUAUCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAACUAAGUUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB334176 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: KSB-3/P/95
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---UCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB334173 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: HG-1/B/95
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---UCAGAUCAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB334155 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: KSB-2/C/86
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---UCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGUACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF529883 Akabane virus strain NT-14 nucleoprotein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUCCUCCAGU
+UUCCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCA------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734971 Akabane virus isolate C1316 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH999471 Shamonda orthobunyavirus strain Shamonda#1Vero_21:01:94 nucleocapsid protein and NSs genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGCUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGUACCUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUAUCCGCUAGUUA
+UCGAAAUGCAUAGGGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278882 Akabane virus isolate KH-1/AKA/C/13/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUAAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278880 Akabane virus isolate 08H65-2 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUAAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278877 Akabane virus isolate 93H78 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY828206 Schmallenberg virus isolate PL_12_1018-08_bos nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY828203 Schmallenberg virus isolate PL_12_36_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY828196 Schmallenberg virus isolate PL_12_25_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309158 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 174/Kent/2012
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGAUAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309153 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 777/Norfolk/2012
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUGCAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309151 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9363/Shropshire/2017
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGAUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309142 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1449/Norfolk/2017
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GCCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309141 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 5082/Shropshire/2017
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCCGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795142 Schmallenberg virus isolate W12-3 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGGACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGAAUC-UUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795140 Schmallenberg virus isolate S11-2 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCACUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGCCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCGACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795111 Schmallenberg virus isolate W12-10-2/3 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108874 Schmallenberg virus isolate BH248/12-1 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108872 Schmallenberg virus isolate BH237/12-4 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108870 Schmallenberg virus isolate BH233/12-1 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAGGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+ACCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108864 Schmallenberg virus isolate BH199/12-5 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCGCAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108860 Schmallenberg virus isolate BH197/12-3 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGAAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGCUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108856 Schmallenberg virus isolate BH148/12-9 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGAGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUUUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>JQ308773 Akabane virus isolate AKAV-32/SKR/2010 nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCGGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>JQ308772 Akabane virus isolate AKAV-17/SKR/2010 nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232310 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-8B01
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCCGAAGUGAAGGGCUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGUCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232305 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-33C01
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCCGAAGUGAAGGGCUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUCA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGUCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232260 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1E98
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUCAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCGCCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232176 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: YG-1E85
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAC-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGUAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF362404 Shamonda virus strain An5550 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAAGGUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUU
+UCGGGGUUGCUAAAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGGACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGCUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAAAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGUACCUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUAUCCGCUAGUUA
+UCGAAAUGCAUAGGGUCCUUAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUACCAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAACUUGCCUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUUGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309148 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 8095/NEWales/2017
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUYCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+RU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000868 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+---------------------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---AUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCCGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGGUAUGGGCAGUUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAAGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAGCUUA--------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734976 Akabane virus isolate DPP237 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGUACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCAGGUGCUGAGAUGUUCCUUGAG-ACC--UUUGAGUUCUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGUCU-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>NC_043549 Peaton virus N and NSs genes, segment S, genomic RNA, isolate CSIRO 110
+------------------------------------------------------------------AGUAGUGUACUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAAUUCAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCGGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAGAUAAAACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGCUGACUAUGUAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUA
+UCGACAUGCAUAGAGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUACUCCGCCAACGUUAUGGUACAUUA
+ACUGCAGAGCAAUGGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGACAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAAACUUCUAAAAAACCCCACU
+CCCU------CCCUAGUAUGGUGUUCCACAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUUUAUUGAUUGUU
+CUAUGUGGAGCACACUACUAGC----------------------------------------------------------
+---------------------------------------------------------------
+>LC309152 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9877/PowysWales/2017
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUMAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HE795095 Peaton virus N and NSs genes, segment S, genomic RNA, isolate CSIRO 110
+------------------------------------------------------------------AGUAGUGUACUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAAUUCAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCGGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAGAUAAAACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGCUGACUAUGUAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUA
+UCGACAUGCAUAGAGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUACUCCGCCAACGUUAUGGUACAUUA
+ACUGCAGAGCAAUGGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGACAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAAACUUCUAAAAAACCCCACU
+CCCU------CCCUAGUAUGGUGUUCCACAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUUUAUUGAUUGUU
+CUAUGUGGAGCACACUACUAGC----------------------------------------------------------
+---------------------------------------------------------------
+>AB232320 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: MP496
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUGUUUUCAAUGAUGUUCC
+A-CAACGGAAUGCAGCUACGUUUAACCCGGAUAUAGGGUAUGUGGCAUUUAUUGCUAAAUAU-GGGCAACAUC-UCAACU
+UCAGUGUUGCUAGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACAUUUGGAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-ACUGCAAAUACAGU
+GUCAGACACUGCCCUUACCUUGCAUCGUAUCUCAGGAUACUUAGCUAGAUGGG---UUGCUGAGC-AAUGCAAAGGG--A
+A---UCAGCUAAAGAUUGCAGAGGCAGCUGCAGUCAUUGUA-AUGCCCUUGGCUGAGAUUAAAGGAUGCACAUGGAAUGA
+UGGAUACACCAUGUAUCUUGGCUUUGCACCUGGGGCAGAGAUGUUUCUUGAG-ACC--UUUGAAUUCUAUCCACUAGUAA
+UUGAUAUGCAUCGUGUACUCAAAGACGGAAUGGAUGUAAACUUUAUGAGGAAAGUCUUGCGCCAGAGAUAUGGCCAAUUA
+ACAGCAGAACAAUGGAUGACUUCCAAGAUCGAUGAAG-UAAAGGCUGCAUUUGGAUCUGUCGCUCAGAUAUCCUGGGCC-
+AAAUCUGGUUUCUCACCUGCAGCUCGCG-CUUUCCUCACUCAAUUUGGAAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232213 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1P93
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCCGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUAGUUA
+UCGACAUGCACCGUGUAAUAAAGGACGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734972 Akabane virus isolate CS1383 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAAGAAGGUCCUACGCCAGAGAUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734949 Akabane virus isolate CS749 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAA-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGAUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734948 Akabane virus isolate CS744 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAA-ACA--UUUGAGUUCUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGAUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB334174 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: HG-2/B/95
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUUCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---UCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278881 Akabane virus isolate 08H65-1 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUAAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUAGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278879 Akabane virus isolate Tainan/17H8 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY828204 Schmallenberg virus isolate PL_13_130-11_ovis nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+ACCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY828202 Schmallenberg virus isolate PL_12_38_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUCGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY828200 Schmallenberg virus isolate PL_15_711_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCGACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY828199 Schmallenberg virus isolate PL_14_962_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUACGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY828198 Schmallenberg virus isolate PL_13_356-2_ovis nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY828197 Schmallenberg virus isolate PL_12_27_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAGUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH484320 Peaton virus strain CSIRO 110 segment S, complete sequence
+--------------------------------------------------------------UAGUAGUAGUGUAUUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAAUUCAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCGGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAGAUAAAACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGCUGACUAUGUAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUA
+UCGACAUGCAUAGAGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUACUCCGCCAACGUUAUGGUACAUUA
+ACUGCAGAGCAAUGGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGACAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAAACUUCUAAAAAAACCCCAC
+UCCCUCCCUAGUAUGGUGUU-----CCACAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUUUAUUGAUUGUU
+CUAUGUGGAGCACACUACUAGGGAG-------------------------------------------------------
+---------------------------------------------------------------
+>LC309155 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 239/Devon/2012
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUAGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309150 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1309/Lancashire/2017
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCAUAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309144 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9321/Lancashire/2017
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUCACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309143 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 7754/Cornwall/2017
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309166 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1916/Dorset/2012
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCCAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309160 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 242/Warickshire/2012
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAUGUCUU-AAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309159 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 182/EastSussex/2012
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCUAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCAUAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795159 Schmallenberg virus isolate W12-9-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAUGCC---UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795158 Schmallenberg virus isolate W12-7 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795156 Schmallenberg virus isolate W12-16-2/3 nucleocapsid protein and truncated nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUAAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795154 Schmallenberg virus isolate W12-4 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCAG--AUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795153 Schmallenberg virus isolate W12-10-3/3 nucleocapsid protein and truncated nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUAGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795151 Schmallenberg virus isolate W12-17-2/2 nucleocapsid protein and truncated nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGAUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795149 Schmallenberg virus isolate W12-12-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795147 Schmallenberg virus isolate W12-10-1/3 nucleocapsid protein and truncated nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAUGUCUU-AAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795124 Schmallenberg virus isolate S12-5-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGCGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108878 Schmallenberg virus isolate BH336/12-1 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108866 Schmallenberg virus isolate BH200/12-2 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACCUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAGAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108854 Schmallenberg virus isolate BH127/12-16 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUUUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUACAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108848 Schmallenberg virus isolate BH37/12-2 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUAAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>JQ308771 Akabane virus isolate AKAV-7/SKR/2010 nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232284 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KM-3B01
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCCGAAGUGAAGGGCUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGUCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232268 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: MZ-1C00
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCCGAAGUGAAGGGCUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGUCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232264 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-5B98
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCCGAAGUGAAGGGCUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232261 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1P98
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAACCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACU--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUCAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCGCCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>NC_043554 Sabo virus N and NSs genes, segment S, genomic RNA, isolate IB AN 9398
+--------------------------------------------------------------------------------
+--------------------CCACUAUUAACUACGUAUCUCUAUGGC------AAGCCAAUUUAUCUUUGAUGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACU
+UCACUGUUGCUCGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----U
+GUCGACCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGU
+GCCAGACACUGCCCUUACACUCCAUAGGAUGUCAGGGUAUCUAGCCAGAUGGG---UUGCUGAGC-UCUGCC---GAGGA
+AA--CCAAAUUAAACUAGCGGAGGCAGCAACAUUGAUUGUC-AUGCCAUUAGCAGAGGUCAAGGGUUGCACCUGGAACGA
+UGGGUACACAAUGUACCUAGGAUUUGCCCCAGGUGCAGAAAUGUUCUUAGAG-ACA--UUCGAAUUUUACCCGCUUGUUA
+UUGAUAUGCACAGAGUUUUGAAGGAUGGGAUGGAUGUCAACUUCAUGCGGAAAGUACUCCGCCAGCGUUAUGGGACACUG
+ACUGCAGAGGAGUGGAUGACAACUAAGAUAGAAGCAG-UCAGGGCUGCAUUCAACUCUGUUGCUCAGAUCUCUUGGGCU-
+AAGACUGGAUUCUCUCCUGCUGCAAGAG-CCUUCCUUGCCAACUUUGGAAUCCAAAUCUAAAAAUAUACCAGUUUCAAAG
+UUCCCUUUUACCUUUCUU---------UUCUUUGUGUAUCAUGUCUAUGUGAUACACGCCAAUUCUGCUGCUUGUGAGAU
+CUAAGCACAGUGGGGCAUUUAUCUUCCCUUGUUGGCAUGGUGAGAAUUUGCAAGUAUAGUUAAUUAGUGGAGAACACUAC
+---------------------------------------------------------------
+>NC_043698 Shuni virus strain SAE1809 nucleocapsid and nonstructural protein genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---UCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGUUGACCAUGUAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUYCUUCGCCAACGCUAUGGGACAUUG
+ACUGCAGAACAAUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACUUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUCAAAACAAUCCCA-
+--CCCCUUUCCCCCAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUCAUCUCUAUUAAUUGUU
+CUAUGUGGAGCACACUACU-------------------------------------------------------------
+---------------------------------------------------------------
+>HE795098 Sabo virus N and NSs genes, segment S, genomic RNA, isolate IB AN 9398
+--------------------------------------------------------------------------------
+--------------------CCACUAUUAACUACGUAUCUCUAUGGC------AAGCCAAUUUAUCUUUGAUGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACU
+UCACUGUUGCUCGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----U
+GUCGACCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGU
+GCCAGACACUGCCCUUACACUCCAUAGGAUGUCAGGGUAUCUAGCCAGAUGGG---UUGCUGAGC-UCUGCC---GAGGA
+AA--CCAAAUUAAACUAGCGGAGGCAGCAACAUUGAUUGUC-AUGCCAUUAGCAGAGGUCAAGGGUUGCACCUGGAACGA
+UGGGUACACAAUGUACCUAGGAUUUGCCCCAGGUGCAGAAAUGUUCUUAGAG-ACA--UUCGAAUUUUACCCGCUUGUUA
+UUGAUAUGCACAGAGUUUUGAAGGAUGGGAUGGAUGUCAACUUCAUGCGGAAAGUACUCCGCCAGCGUUAUGGGACACUG
+ACUGCAGAGGAGUGGAUGACAACUAAGAUAGAAGCAG-UCAGGGCUGCAUUCAACUCUGUUGCUCAGAUCUCUUGGGCU-
+AAGACUGGAUUCUCUCCUGCUGCAAGAG-CCUUCCUUGCCAACUUUGGAAUCCAAAUCUAAAAAUAUACCAGUUUCAAAG
+UUCCCUUUUACCUUUCUU---------UUCUUUGUGUAUCAUGUCUAUGUGAUACACGCCAAUUCUGCUGCUUGUGAGAU
+CUAAGCACAGUGGGGCAUUUAUCUUCCCUUGUUGGCAUGGUGAGAAUUUGCAAGUAUAGUUAAUUAGUGGAGAACACUAC
+---------------------------------------------------------------
+>AF362396 Sabo virus strain An9398 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CUAUUAACUACGUACCUCU------A-----------------UGGC------AAGCCAAUUUAUCUUUGAUGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACU
+UCACUGUUGCUCGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----U
+GUCGACCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGU
+GCCAGACACUGCCCUUACACUCCAUAGGAUGUCAGGGUAUCUAGCCAGAUGGG---UUGCUGAGC-UCUGCC---GAGGA
+AA--CCAAAUUAAACUAGCGGAGGCAGCAACAUUGAUUGUC-AUGCCAUUAGCAGAGGUCAAGGGUUGCACCUGGAACGA
+UGGGUACACAAUGUACCUAGGAUUUGCCCCAGGUGCAGAAAUGUUCUUAGAG-ACA--UUCGAAUUUUACCCGCUUGUUA
+UUGAUAUGCACAGAGUUUUGAAGGAUGGGAUGGAUGUCAACUUCAUGCGGAAAGUACUCCGCCAGCGUUAUGGGACACUG
+ACUGCAGAGGAGUGGAUGACAACUAAGAUAGAAGCAG-UCAGGGCUGCAUUCAACUCUGUUGCUCAGAUCUCUUGGGCU-
+AAGACUGGAUUCUCUCCUGCUGCAAGAG-CCUUCUUUGCCAACUUUGGAAUCCAAAUCUAAA-AAAU------AUACCAG
+UUUCAAAGUUCCCUUUUACCUUUCUUUUUCUUUGUGUAUCAUGUCUAUGUGAGACACGCCAAUUCUGCUGCUUGUGAGAU
+CUAAGCACAGUGGGGCAUUUAUCUUCCCUUGUUGGCAUGGUGAGAAUUUGCAAGUAUAGUUAAAUAGCGGAGUACACUAC
+U--------------------------------------------------------------
+>MH734974 Akabane virus isolate CS1796 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUA
+UAGACAUGCACCGUGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734973 Akabane virus isolate CS1586 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUA
+UAGACAUGCACCGUGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734970 Akabane virus isolate CS979 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUA
+UAGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734956 Akabane virus isolate CS1778 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUA
+UAGACAUGCACCGUGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734951 Akabane virus isolate CS1209 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUA
+UAGACAUGCACCGUGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734945 Akabane virus isolate CS505 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUA
+UAGACAUGCACCGUGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734944 Akabane virus isolate CS396 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUA
+UAGACAUGCACCGUGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734943 Akabane virus isolate CS294 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUA
+UAGACAUGCACCGUGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734942 Akabane virus isolate CS0221 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAGUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGA
+UGGGUAUGCAAUGUACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUA
+UAGACAUGCACCGUGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-
+AAGUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF034941 Akabane virus strain Iriki nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+--------------------------------------------------------------------------------
+-------------------------------UACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGU
+UUCCUUGCUUCUAUUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUU
+UUAUUGUUUAUA--------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000866 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---AUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCCGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGGUAUGGGCAGUUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAAGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000861 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000859 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCCGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGGUAUGGGCAGUUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH999469 Akabane orthobunyavirus strain Cu170#1Vero_21:07:94 nucleocapsid protein and NSs genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAGCCAAUUUAUCUUUGAUGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACU
+UCACUGUUGCUCGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----U
+GUCGACCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGU
+GCCAGACACUGCCCUUACACUCCAUAGGAUGUCAGGGUAUCUAGCCAGAUGGG---UUGCUGAGC-UCUGCC---GAGGA
+AA--UCAAAUUAAACUAGCAGAGGCAGCAACAUUGAUUGUC-AUGCCACUGGCAGAGGUCAAGGGUUGCACCUGGAACGA
+UGGGUACACAAUGUACUUAGGAUUUGCCCCAGGUGCAGAAAUGUUCUUAGAG-ACA--UUCGAAUUCUACCCGCUUGUUA
+UUGACAUGCACAGAGUUUUGAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAAGUACUUCGCCAGCGUUAUGGGACUCUG
+ACUGCAGAGGAGUGGAUGACAACUAAGAUAGAAGCAG-UCAGGGCUGCAUUCAACUCUGUUGCUCAGAUCUCUUGGGCU-
+AAGACUGGAUUCUCUCCUGCUGCAAGAG-CCUUCCUUGCCAACUUUGGAAUCCAAAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278876 Akabane virus isolate 13H22 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUUGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUAAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278875 Akabane virus isolate 13H35 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUUGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUAAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278870 Akabane virus isolate PT-1/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCCGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278866 Akabane virus isolate YL-1/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY828201 Schmallenberg virus isolate PL_12_28_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCGACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGGUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP144999 Akabane virus strain DHL10M110 nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAAUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAAAUCAAGCUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUCUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGACGGAAUGGAUGUUAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795160 Schmallenberg virus isolate W12-6 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUCACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795157 Schmallenberg virus isolate S11-3 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-CCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--CUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795150 Schmallenberg virus isolate S12-4 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACAGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUGUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795134 Schmallenberg virus isolate S12-6b-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGCGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCGCCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795129 Schmallenberg virus isolate S11-1 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGCGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACCGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HE800143 Shuni virus N and NSs genes, segment S, genomic RNA, isolate Ib An 10107
+------------------------------------------------------------------AGUAGUGUAUUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACCCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUGAAAGGUUGUACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACA--UUUGAGUUCUACCCUCUGGUCA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUAUGGGACAUUG
+ACUGCAGAACAGUGGAUGACGCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAGUCAGGAUUCUCACCAGCUGCUAGA-ACUUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAAUAAUCCCA-
+--CCCCUUUCCCCCAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCCGCAGCAUUGUUCAUUUAUCUCUAUUAAUUGUU
+CUAUGUGGAGCACACUAC--------------------------------------------------------------
+---------------------------------------------------------------
+>KC108868 Schmallenberg virus isolate BH231/12-1 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUAGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108862 Schmallenberg virus isolate BH198/12-5 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAAGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108852 Schmallenberg virus isolate BH77/12-1 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGA---GUCA--AAUUUACAGUAGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108846 Schmallenberg virus isolate BH28/12-5 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUCAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUACAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KC108842 Schmallenberg virus isolate BH02/12-1 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUAAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACAGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232291 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: MZ-6C01
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCAGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCCGAAGUGAAGGGCUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGUCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232286 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KM-7B01
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCCGAAGUGAAGGGCUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGUCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232207 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-3E90
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC309146 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 184/SWWales/2017
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAWAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGRUUAAUAACCAUUUUYCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+RU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGRUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGARAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB000863 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH484299 Kaikalur virus strain VRC 713423-2 segment S, complete sequence
+---------------------------------------------------------------AGUAGUAGUGUACUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAAUUUAUUUUUCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAGAUGGG---UUGCAGACC-AGUGCAAA--ACAA
+A---UCAGAUUAAAUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCCGAAGUGAAAGGUUGCACCUGGACCGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCGGGUGCUGAAAUGUUUUUAGAA-ACA--UUCGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAGGACGGGAUGGAUGUCAACUUUAUGAGGAAGGUCCUUCGCCAGCGCUAUGGCACAUUG
+ACUGCAGAGCAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAAAUUCCUAUAAAACCCCA--
+---CCCCUUUCCCCAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUUCUUUCUAUUAAUUGUU
+CUAUGUGGAGCACA------------------------------------------------------------------
+---------------------------------------------------------------
+>LC198187 Shamonda orthobunyavirus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KSB-1/C/15
+--------------------------------------------------------------------------------
+-----------------------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAAUU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUA
+GU-GUCC--UCAAGCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUAUCCACUAGUUA
+UCGAAAUGCAUAGGGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGGACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUUAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC198186 Shamonda orthobunyavirus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KS-2/P/15
+--------------------------------------------------------------------------------
+-----------------------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAAUU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUA
+GU-GUCC--UCAAGCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUAUCCACUAGUUA
+UCGAAAUGCAUAGGGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGGACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUUAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>LC198185 Shamonda orthobunyavirus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KS-1/P/15
+--------------------------------------------------------------------------------
+-----------------------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAAUU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUA
+GU-GUCC--UCAAGCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUAUCCACUAGUUA
+UCGAAAUGCAUAGGGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGGACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUUAACAUUUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH999468 Akabane orthobunyavirus strain Sabo#2Vero#1BHK_03:08:94 nucleocapsid protein and NSs genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAGCCAAUUUAUCUUUGAUGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACU
+UCACUGUUGCUCGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----U
+GUCGACCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGU
+GCCAGACACUGCCCUUACACUCCAUAGGAUGUCAGGGUAUCUAGCCAGAUGGG---UUGCUGAGC-UCUGCC---GAGGA
+AA--CCAAAUUAAACUAGCGGAGGCAGCAACAUUGAUUGUC-AUGCCAUUAGCAGAGGUCAAGGGUUGCACCUGGAACGA
+UGGGUACACAAUGUACCUAGGAUUUGCCCCAGGUGCAGAAAUGUUCUUAGAG-ACA--UUCGAAUUUUACCCGCUUGUUA
+UUGAUAUGCACAGAGUUUUGAAGGAUGGGAUGGAUGUCAACUUCAUGCGGAAAGUACUCCGCCAGCGUUAUGGGACACUG
+ACUGCAGAGGAGUGGAUGACAACUAAGAUAGAAGCAG-UCAGGGCUGCAUUCAACUCUGUUGCUCAGAUCUCUUGGGCU-
+AAGACUGGAUUCUCUCCUGCUGCAAGAG-CCUUCCUUGCCAACUUUGGAAUCCAAAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278874 Akabane virus isolate YL-1/AKA/M/15/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUAAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCGGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278873 Akabane virus isolate 12H37 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUAAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278872 Akabane virus isolate 13H33 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUAAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUAAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278869 Akabane virus isolate HL-3/AKA/M/12/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCCGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGAGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCCGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278868 Akabane virus isolate HL-1/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGUUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCCG
+A-AUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF278867 Akabane virus isolate YL-2/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCGUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795146 Schmallenberg virus isolate W13-3 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAGUCCUGU
+GCCAGACAAUGCCAUUAUACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795133 Schmallenberg virus isolate W12-19 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGCGUUGCUAGAGCCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+AU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACCGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB698470 Shamonda virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: ON-3/P/07, segment S
+--------------------------------------------------------------------------------
+-----------------------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUA
+GU-GUCC--UCAAGCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUCGAUUUCUAUCCACUAGUUA
+UCGAAAUGCAUAGGGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCAUAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232175 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: Iriki956-5-A
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGACAGCUG
+ACUGCAGAGGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB183283 Shamonda virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain:MZ-7/P/02
+--------------------------------------------------------------------------------
+-----------------------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUA
+GU-GUCC--UCAAGCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUCGAUUUCUAUCCACUGGUUA
+UCGAAAUGCAUAGGGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUCCGUGCAAUAU-----GUCUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB183282 Shamonda virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain:MZ-6/P/02
+--------------------------------------------------------------------------------
+-----------------------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUA
+GU-GUCC--UCAAGCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUCGAUUUCUAUCCACUAGUUA
+UCGAAAUGCAUAGGGUCCUUAAGGACAAUAUGGAUGUCAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB183279 Shamonda virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain:MZ-3/P/02
+--------------------------------------------------------------------------------
+-----------------------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUA
+GU-GUCC--UCAAGCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUCGAUUUCUAUCCACUGGUUA
+UCGAAAUGCAUAGGGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB183278 Shamonda virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain:KSB-6/C/02
+--------------------------------------------------------------------------------
+-----------------------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUA
+GU-GUCC--UCAAGCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUCGAUUUCUAUCCACUAGUUA
+UCGAAAUGCAUAGGGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCU
+UCAAUUUCCGUGCAAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA----
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB244090 Akabane virus gene for nucleocapsid, partial cds, strain: Okayama 2001
+--------------------------------------------------------------------------------
+------------------------------------------------------AAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCAGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAAAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAU------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB232244 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: CB-2B98
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGCAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---AUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCCGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGGUAUGGGCAGUUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAAGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUUCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734994 Peaton virus isolate cs347 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUCAUUUUUCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUUUCGGGAUAUUUAGCUAAAUGGG---UCGCAGAUC-AAUGCAAA--ACAA
+A---CCAGAUAAAACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACUUGGACUGA
+GGGGCUGACUAUGUAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUA
+UCGACAUGCAUAGAGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUACUUCGCCAACGUUAUGGUACAUUA
+ACUGCAGAGCAAUGGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUAAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734982 Aino virus isolate cs655 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGCUAUGUGGCAUUUAUUGCUAAACAUAGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACCCUCCACCGUCUUUCAGGAUAUCUAGCAAGAUGGG---UUGCAGACC-AGUGCAAA--ACAA
+A---UCAGAUUAAAUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGCACCUGGACUGA
+AGGAUUGACUAUGUAUCUGGGAUUUGCACCGGGUGCUGAAAUGUUUUUAGAA-ACA--UUCGAAUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAGGAUGGAAUGGAUGUCAAUUUUAUGAGGAAGGUCCUUCGCCAGCGCUAUGGCACACUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCCGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT795144 Schmallenberg virus isolate W13-1 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACU
+UCGGUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----U
+GUCGAUCUUACUUUUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAGCCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUUUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUG
+GU-GUCC--UCAAAUUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-
+AAAUCUGGAUUCUCUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB334154 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: B7974
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUCAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UUGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAA
+A---CCAGAUAAAAUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUAAAAGGCUGUACCUGGACUGA
+AGGACUGACUAUGUAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUA
+UUGAUAUGCAUAGAGUACUAAAAGAUGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUG
+ACUGCAGAGCAAUGGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734986 Aino virus isolate cs378 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUCAUUUUUCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAA
+A---CCAGAUAAAAUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGA
+AGGACUAACUAUGUAUUUAGGUUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUA
+UUGAUAUGCAUAGAGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUG
+ACUGCAGAGCAAUGGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734983 Aino virus isolate cs990 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUCAUUUUUCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAA
+A---CCAGAUAAAAUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGA
+AGGACUAACUAUGUAUUUAGGUUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUA
+UUGAUAUGCAUAGAGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUG
+ACUGCAGAGCAAUGGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734980 Aino virus isolate cs276 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUCAUUUUUCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAA
+A---CCAGAUAAAAUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGA
+AGGACUAACUAUGUAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUA
+UUGAUAUGCAUAGAGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUG
+ACUGCAGAGCAAUGGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734979 Aino virus isolate B7974 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUCAUUUUUCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAA
+A---CCAGAUAAAAUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGA
+AGGACUAACUAUGUAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUA
+UUGAUAUGCAUAGAGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUG
+ACUGCAGAGCAAUGGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY378155 Akabane virus strain ISR-01 nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUCGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGCUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUGCGCCAGAGGUACGGGCAGCUG
+ACUGCAGAGGAGUGGAUGACAUCUAAGUUGGAUGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGUUUCUCACCUGCAGCAAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH999473 Shuni orthobunyavirus strain Shuni#2BHK#2Vero_22:05:98 nucleocapsid protein and NSs genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACCCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+GGGGUUGACCAUGUACCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACA--UUUGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUAUGGGACAUUG
+ACUGCAGAACAGUGGAUGACGCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAGUCAGGAUUCUCACCAGCUGCCAGA-ACUUUCCUUGCCCAAUUCGGUAUAAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KU133231 Akabane virus isolate Adana-15 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+---------------------------------------------GC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAACAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGAUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUG
+ACUGCAGAGGAGUGGAUGACAUCUAAGUUGGAUGCAG-UUAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCAAGAG-CUUUCCUGGCUCAAUUCGGU-------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>JQ308774 Akabane virus isolate AKAV-35/SKR/2010 nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAUUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGA
+UGGGUAUGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGCCUUACGCCAGACAUAUGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-
+ACAUCUCGCUUCUCACCUGCCGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF362394 Kaikalur virus strain VRC713423-2 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AACCCAUUUUAUUUUUCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAGAUGGG---UUGCAGACC-AGUGCAAA--ACAA
+A---UCAGAUUAAAUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCCGAAGUGAAAGGUUGCACCUGGACCGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCGGGUGCUGAAAUGUUUUUAGAA-ACA--UUCGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAGGACGGGAUGGAUGUCAACUUUAUGAGGAAGGUCCUUCGCCAGCGCUAUGGCACAUUG
+ACUGCAGAGCAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAAAUUCCUAUAAAACCCCA--
+---CCCCUUUCCCCAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUUCUUUCUAUUAAUUGUU
+CUAUGUGGAGCCACACUACU------------------------------------------------------------
+---------------------------------------------------------------
+>MF278871 Akabane virus isolate YL-3/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCC
+A-CAACGGAAUGCAGCUACAUUUAAUCCGAAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACU
+UUACUGUUGCUGGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUAAAGGGCUGCACCUGGAGUGA
+UGGGUACGCAAUGUACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UUGACAUGCACCGUGUAAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUG
+ACUGCAGAAGAAUGGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-
+AAAUCUGGCUUCUCACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734992 Peaton virus isolate cs245 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUCAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCGGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAGAUAAAACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGCUGACUAUGUAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUA
+UCGACAUGCAUAGAGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUACUCCGCCAACGUUAUGGUACAUUA
+ACUGCAGAGCAAUGGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGACAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF362401 Peaton virus strain CSIRO 110 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUCAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCGGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAGAUAAAACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGCUGACUAUGUAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUA
+UCGACAUGCAUAGAGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUACUCCGCCAACGUUAUGGUACAUUA
+ACUGCAGAGCAAUGGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGACAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>NC_043557 Sango virus N and NSs genes, segment S, genomic RNA, isolate An 5077
+----------------------------------------------------------------------GUGUACUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAAUUCAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UUGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGAGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCAGGCUAUCUAGCUAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAAAUCAAACUAGCGGAAGCUAUGGAAAAAAUCGUC-AUGCCACUUGCUGAAGUGAAAGGCUGCACUUGGACUGA
+AGGGCUGACUAUGUAUCUGGGAUUUGCACCUGGUGCAGAAAUGUUCCUGGAA-ACA--UUUGAAUUCUACCCUUUGGUUA
+UUGACAUGCAUAGAGUGCUAAAGGACGGAAUGGAUGUCAACUUUAUGAGAAAAGUCCUCCGUCAGCGUUACGGCACAUUG
+ACUGCAGAGCAAUGGAUGACUCAAAAAAUAGAUGCUG-UUCGCGCAGCUUUUAAUGCUGUUGGCCAAUUGAGCUGGGCC-
+AAAUCUGGAUUCUCACCAGCAGCCAG-GACCUUCCUUGCCCAAUUUGGUAUCAAUAUCUAAAUUCAUAAAAGAAUCC---
+-CACCCUUUCCCCCAGUAUGGUGUUUCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUU
+CUAUGUGGAGC---------------------------------------------------------------------
+---------------------------------------------------------------
+>HE795101 Sango virus N and NSs genes, segment S, genomic RNA, isolate An 5077
+----------------------------------------------------------------------GUGUACUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAAUUCAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UUGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGAGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCAGGCUAUCUAGCUAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAAAUCAAACUAGCGGAAGCUAUGGAAAAAAUCGUC-AUGCCACUUGCUGAAGUGAAAGGCUGCACUUGGACUGA
+AGGGCUGACUAUGUAUCUGGGAUUUGCACCUGGUGCAGAAAUGUUCCUGGAA-ACA--UUUGAAUUCUACCCUUUGGUUA
+UUGACAUGCAUAGAGUGCUAAAGGACGGAAUGGAUGUCAACUUUAUGAGAAAAGUCCUCCGUCAGCGUUACGGCACAUUG
+ACUGCAGAGCAAUGGAUGACUCAAAAAAUAGAUGCUG-UUCGCGCAGCUUUUAAUGCUGUUGGCCAAUUGAGCUGGGCC-
+AAAUCUGGAUUCUCACCAGCAGCCAG-GACCUUCCUUGCCCAAUUUGGUAUCAAUAUCUAAAUUCAUAAAAGAAUCC---
+-CACCCUUUCCCCCAGUAUGGUGUUUCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUU
+CUAUGUGGAGC---------------------------------------------------------------------
+---------------------------------------------------------------
+>KP900872 Shuni virus strain Shuni/2417/1/14 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------CACUAUAGAACAAAGCUUUUGAAUGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UYCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGUGGAGCA--------------------------------------------------------------------
+---------------------------------------------------------------
+>KP900878 Shuni virus strain Shuni/2504/2/14 nucleocapsid protein gene, complete cds
+-------------------------------------------------------------------------UAUUCCA
+CUAUAGAACAAAGCUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGCCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGU--------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF362405 Shuni virus strain An10107 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAGUUUAUUUUCCAAAAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACCCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUGAAAGGUUGUACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACA--UUUGAGUUCUACCCUCUGGUCA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUAUGGGACAUUG
+ACUGCAGAACAGUGGAUGACCCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAAGUAAACUGGGCCA
+AAAUCAGGAUUUU-ACCAGCUGCUAGA-ACUUUCCUUGCCCAAUUCGGUAUAAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF361849 Shuni orthobunyavirus isolate ISR-242/16 segment S, complete sequence
+--------------------------------------------------------------------------------
+----------------UUCCCACUAUAGAACAAAGCUUUUAAAUGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGACGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGUGGAG----------------------------------------------------------------------
+---------------------------------------------------------------
+>KP900860 Shuni virus strain Shuni/263/14 nucleocapsid protein gene, complete cds
+-------------------------------------------------------------------------UAUUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGURGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACURGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGUGGAGCACACUACA-------------------------------------------------------------
+---------------------------------------------------------------
+>KU937313 Shuni virus isolate 2504/3/14 segment S, complete sequence
+-----------------------------------------------------------------CAGUAGUGUACUCCA
+CUAUAGAACAAAGCUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGUGGAGCACACUACU-------------------------------------------------------------
+---------------------------------------------------------------
+>KP900883 Shuni virus strain Shuni/2504/3/14 isolate 2504/3/14 m nucleocapsid protein gene, complete cds
+------------------------------------------------------------------------GUACUCCA
+CUAUAGAACAAAGCUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGUGGAGCC--------------------------------------------------------------------
+---------------------------------------------------------------
+>KT946780 Shuni virus strain SHUV/ISR-2417/2/14 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------CACUAUAGAACAAAGCUUUUGAAUGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUWGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UYCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACYUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGUGGAGCA--------------------------------------------------------------------
+---------------------------------------------------------------
+>KP900869 Shuni virus strain Shuni/275/1/14 nucleocapsid protein gene, partial cds
+-------------------------------------------------------------------------UAUUCCA
+CUAUAGAACAAAGCUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACUUUCCUUGCCCAAUUCG---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF361855 Shuni orthobunyavirus isolate ISR-2162/16 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------UAUUCCCACUAUAGAACAAAGCUUUUAAAUGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGACGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGUGGAG----------------------------------------------------------------------
+---------------------------------------------------------------
+>MF361846 Shuni orthobunyavirus isolate ISR-129/16 segment S, complete sequence
+--------------------------------------------------------------------------------
+-------------------------UAGAACAAAGCUUUUAAAUGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUAGUUA
+UUGACAUGCACAGAGUGCUAAAAGACGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGAAUC-UUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGUGGAGCACACCUACA------------------------------------------------------------
+---------------------------------------------------------------
+>AB542963 Peaton virus genes for N protein, NSs protein, complete cds, strain: ON-10/E/01
+--------------------------------------------------------------------------------
+--------------------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCUGGCUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGUAA--GACUA
+A---CCAAAUCAAACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACUGA
+AGGACUCACCAUGUACCUAGGCUUUGCACCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUA
+ACUGCAGAGCAGUGGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCCUUUAAUGCUGUUGGUCAACUAAGCUGGGCC-
+AAGUCAGGAUUCUCACCGGCAGCUAG-GACCUUCCUUGCCCAGUUUGGUAUAAACAUUUAAACAAAGAAAAAUCCC----
+-UACCCUUUUCCCCAGUAUGGUGUUUCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUUAUCUCUAUUGAUUGUU
+CUAU----------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP900867 Shuni virus strain Shuni/274/14 nucleocapsid protein gene, complete cds
+-------------------------------------------------------------------------UAUUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUAGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UYCGUGCAGCAUUCAAUGCUAUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGUGGAGCACACUACA-------------------------------------------------------------
+---------------------------------------------------------------
+>MF361852 Shuni orthobunyavirus isolate ISR-2067/16 segment S, complete sequence
+--------------------------------------------------------------------------AUUCCA
+CUAUAGAACAAAGCUUUUAA-----A-----------------UGCC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAGUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGACGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGUGGAGCACAACUACA------------------------------------------------------------
+---------------------------------------------------------------
+>AF362402 Sango virus strain An5077 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUCCUUUUUCAAGAUGUUCC
+U-CAACGGAAUUCUGCUACGUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UUGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGAGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCAGGCUAUCUAGCUAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAAAUCAAACUAGCGGAAGCUAUGGAAAAAAUCGUC-AUGCCACUUGCUGAAGUGAAAGGCUGCACUUGGACUGA
+AGGGCUGACUAUGUAUCUGGGAUUUGCACCUGGUGCAGAAAUGUUCCUGGAA-ACA--UUUGAAUUCUACCCUUUGGUUA
+UUGACAUGCAUAGAGUGCUAAAGGACGGAAUGGAUGUCAACUUUAUGAGAAAAGUCCUCCGUCAGCGUUACGGCACAUUG
+ACUGCAGAGCAAUGGAUGACUCAAAAAAUAGAUGCUG-UUCGCGCAGCUUUUAAUGCUGUUGGCCAAUUGAGCUGGGCC-
+AAAUCUGGAUUCUCACCAGCAGCCAG-GACCUUCCUUGCCCAAUUUGGUAUCAAUAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KT946781 Shuni virus strain SHUV/ISR-2504/3/14 nucleocapsid protein gene, partial cds; and nonstructural protein-like gene, complete sequence
+--------------------------------------------------------------------------------
+------------------------------------------------------AACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UYCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGUGGAGCACACUACA-------------------------------------------------------------
+---------------------------------------------------------------
+>KP900859 Shuni virus strain Shuni/215/14 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------------------------UUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UYCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAU------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB542965 Peaton virus genes for N protein, NSs protein, complete cds, strain: KSB-1/P/06
+--------------------------------------------------------------------------------
+--------------------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUCAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCCGGCUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUA
+A---CCAAAUCAAACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGA
+GGGACUCACCAUGUACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUA
+ACUGCAGAGCAGUGGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUUAAUGCUGUUGGUCAACUAAGCUGGGCC-
+AAGUCAGGAUUCUCACCAGCAGCUAGA-ACCUUCCUUGCCCAGUUUGGUAUAAACAUUUAAACAAGAAAAAAUCCC----
+-UACCCUUUUCCCCAGUAUGGUGUUUCAGAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUU
+CUAU----------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP900882 Shuni virus strain Shuni/2504/3/14 isolate 2504/3/14 v nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------------------------UUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UYCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA-
+--CCCCUUUUCCCUAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUU
+CUAUGUGGAGCACACUACA-------------------------------------------------------------
+---------------------------------------------------------------
+>AY048680 Peaton virus strain NS-3/P/99 nucleoprotein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUAGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCCGGCUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUA
+A---CCAAAUCAAACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGCUGCACCUGGACCGA
+AGGACUCACCAUGUACCUAGGAUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUA
+ACUGCAGAGCAGUGGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUUAAUGCUGUUGGUCAACUAAGCUGGGCC-
+AAGUCAGGAUUCUCACCAGCAGCUAG-GACCUUCCUUGCCCAGUUUGGUAUAAACAUUUAAACAAAGAAAAAUCCC----
+-UACCCUUUCCCCCAGUAUGGUGUUUCAGGACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUU
+CUAU----------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY048679 Peaton virus strain MZ-4/C/99 nucleoprotein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCCGGCUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUA
+A---CCAAAUCAAACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGA
+AGGACUCACCAUGUACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUA
+ACUGCAGAGCAGUGGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUUAAUGCUGUUGGUCAACUAAGCUGGGCC-
+AAGUCAGGAUUCUCACCAGCAGCUAG-GACCUUCCUUGCCCAGUUUGGUAUAAACAUUUAAACAAAGAAAAAUCCC----
+-UACCCUUUCCCCCAGUAUGGUGUUUCAGAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUU
+CUAU----------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB542964 Peaton virus genes for N protein, NSs protein, complete cds, strain: ON-1/P/05
+--------------------------------------------------------------------------------
+--------------------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUCGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCAAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCCGGCUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUA
+A---CCAAAUCAAACUAGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGA
+AGGACUCACCAUGUACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGUACAUUA
+ACUGCAGAGCAGUGGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUUAAUGCUGUUGGUCAACUAAGCUGGGCC-
+AAGUCAGGAUUCUCACCAGCGGCUAG-GACCUUCCUUGCCCAAUUUGGUAUAAACAUUUAAACAAAGAAAAAUCCC----
+-UACCCUUUUCCCCAGUAUGGUGUUUCAGAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUU
+CUAU----------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB542962 Peaton virus genes for N protein, NSs protein, complete cds, strain: OYE-56-8
+--------------------------------------------------------------------------------
+--------------------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCCGGCUAUCUAGCUAAGUGGG---UUGCAGACC-AGUGCAA--GACCA
+A---CCAAAUCAAGCUGGCUGAGGCCAUGGAGAAAAUCGUC-AUGCCACUUGCUGAGGUGAAGGGUUGCACCUGGACCGA
+AGGACUCACCAUGUACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCCCUAGUUA
+UUGAUAUGCACAGAGUGCUAAAAGACGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUA
+ACUGCAGAGCAAUGGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUUAAUGCUGUUGGUCAACUAAGCUGGGCC-
+AAGUCAGGAUUCUCACCAGCAGCCAG-GACCUUCCUUGCUCAAUUUGGUAUAAACAUUUAAACAAAGAAAAACCCC----
+-UACCCUUUUCCCUAGUAUGGUGUUUCAUAACACCAUACGCCAUUCCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUU
+CUAU----------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP900862 Shuni virus strain Shuni/267/4/14 nucleocapsid protein gene, partial cds
+-------------------------------------------------------------------------UAUUCCA
+CUAUAGAACAAAGCUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUAUGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UC----------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP900877 Shuni virus strain Shuni/2504/1/14 nucleocapsid protein gene, partial cds
+-------------------------------------------------------------------------UAUUCCA
+CUAUAGAACAAAGCUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UAAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACAUUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCA-------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP900871 Shuni virus strain Shuni/275/2/14 nucleocapsid protein gene, partial cds
+-------------------------------------------------------------------------UAUUCCA
+CUAUAGAACAAAGCUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCG--------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP900861 Shuni virus strain Shuni/267/2/14 nucleocapsid protein gene, partial cds
+-------------------------------------------------------------------------UAUUCCA
+CUAUAGAACAAAGCUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUU
+UCGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UC----------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KU296970 Akabane virus isolate Aksu-2 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------ACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAACAGC-UCAACU
+UUGCUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGAUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUG
+ACUGCAGAGGAGUGGAUGACAUCUAAGUUAGAUGCAG-UUAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGG----
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP900865 Shuni virus strain Shuni/273/14 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-CGAUACCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACUUUCCUUGCCCAAUUCG---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP900870 Shuni virus strain Shuni/275/1/14 isolate 275/1/14 m nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------CCGUUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----U
+GUUGAUCUUACAUUUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGA
+GGGGUUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUA
+UUGACAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-
+AAAUCAGGAUUCUCACCAGCUGCCAGA-ACUUUCCUUGCCCAAUUCG---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734995 Thimiri orthobunyavirus isolate cs0001 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AAACCAAUUCAUUUUUCAAGAUGUUCC
+U-CAACGGAAUCUCGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUACUGCUAAAUAUGGGGCC-CAAC-UCACUG
+UUGAUACAGCUCGAGUGUUCUUCCUCAAUCAGAAGCGCGCCAAGGAUCGUC-UCCGUCAGACGUCGCAACCAGU-----U
+GUCGAUCUUACAUUUAACAAGCACGUC-----UUUCGAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAA
+A---CCAGAUAAAAUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGA
+AGGACUAACUAUGUAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUA
+UUGAUAUGCAUAGAGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUG
+ACUGCAGAGCAAUGGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>NC_043576 Jatobal virus nucleocapsid protein and nonstructural protein genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACGUAAAAUAA-----AACAUACAAGA-------UGUC---------AGAAUUCGUUUUCAAUGAUGUACC
+A-CAAAGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAAAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACGUCGCGGCCCAU-----G
+GUUGAACUUACUUUUGGAGGG---GUUA--AAUUUACAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGGCAAAUCCGGU
+GCCAGACAACGGUCUUACCUUACACCGUCUGUCAGGAUAUCUAGCUCGUUGGGCUUUCACCCAA---AUGA----GAUCU
+-----CCUCUGAAACAAGCAGAGUUUAGAGCUGCAAUUGUG-AUCCCUUUAGCCGAAGUUAAGGGGUGCACUUGGAAUGA
+UGGUGAUGCCAUGUACUUGGGAUUUGCUGCUGGUGCAGAAAUGUUUCUGCAA-ACA--UUUACAUUUUUUCCUCUUGUCA
+UAGAGAUGCAUAGAGUUUUAAGAGAUGGCAUGGAUGUUAACUUCAUGAAAAAAGUAUUAAGACAACGCUAUGGACAAAAA
+ACUGCUGAACAAUGGAUGAAGGAGGAAAUAAUUGCUG-UUAGAGCAGCAUUUGAAGCAGUUGGAACUCUAGCUUGGGCU-
+AGAACAGGAUUCUCUCCUGCUGCUAGAGAA-UUCUUGCGCCAGUUUGGAAUUGAUCUUUAAAGCUUAAUUAUUGCAUAAG
+UAGUCAAAUAGAUAAUAAAUAAAACAAAAAAUACAAAAAAAGUAUAAAAUAUAAAAACACAAAAAAAGUGCGAAAGCACA
+AAUUAGCACUGCAGUACUUAUUGAGGGUUGGGAGGUUGGGGAAACUAUAUAAUUA----CU------------------A
+UGUCAUUUUUUUAGAUGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>JQ675601 Jatobal virus nucleocapsid protein and nonstructural protein genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACGUAAAAUAA-----AACAUACAAGA-------UGUC---------AGAAUUCGUUUUCAAUGAUGUACC
+A-CAAAGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAAAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACGUCGCGGCCCAU-----G
+GUUGAACUUACUUUUGGAGGG---GUUA--AAUUUACAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGGCAAAUCCGGU
+GCCAGACAACGGUCUUACCUUACACCGUCUGUCAGGAUAUCUAGCUCGUUGGGCUUUCACCCAA---AUGA----GAUCU
+-----CCUCUGAAACAAGCAGAGUUUAGAGCUGCAAUUGUG-AUCCCUUUAGCCGAAGUUAAGGGGUGCACUUGGAAUGA
+UGGUGAUGCCAUGUACUUGGGAUUUGCUGCUGGUGCAGAAAUGUUUCUGCAA-ACA--UUUACAUUUUUUCCUCUUGUCA
+UAGAGAUGCAUAGAGUUUUAAGAGAUGGCAUGGAUGUUAACUUCAUGAAAAAAGUAUUAAGACAACGCUAUGGACAAAAA
+ACUGCUGAACAAUGGAUGAAGGAGGAAAUAAUUGCUG-UUAGAGCAGCAUUUGAAGCAGUUGGAACUCUAGCUUGGGCU-
+AGAACAGGAUUCUCUCCUGCUGCUAGAGAA-UUCUUGCGCCAGUUUGGAAUUGAUCUUUAAAGCUUAAUUAUUGCAUAAG
+UAGUCAAAUAGAUAAUAAAUAAAACAAAAAAUACAAAAAAAGUAUAAAAUAUAAAAACACAAAAAAAGUGCGAAAGCACA
+AAUUAGCACUGCAGUACUUAUUGAGGGUUGGGAGGUUGGGGAAACUAUAUAAUUA----CU------------------A
+UGUCAUUUUUUUAGAUGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KU296969 Akabane virus isolate Aksu-1 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------AUCAGUAAGUAU-GGGCAACAGC-UCAACU
+UUGCUGUUGCUAGAGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGAUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUG
+ACUGCAGAGGAGUGGAUGACAUCUAAGUUAGAUGCA--------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>DQ993247 Aino virus strain KSA 9910 S protein mRNA, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------UGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUUACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGUAAA--ACGA
+A---UCAGAUUAAAUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUGGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGGCUGACUAUGUAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUUUUAGAA-ACA--UUUGAAUUCUACCCUUUGGUUA
+UUGAUAUGCACAGAGUGCUGAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUUCGCCAGCGCUACGGCACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGCUGGGCU-
+AAAUCAGGAUUCUCACCAGCUGCUAGAG-CCUUCCUUGCCCAAUUUGGCAUAAACAUCUAAAUUCCUGUAAAACCCCACC
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP795086 Oropouche virus strain TVP-19256/IQE-7894 structural nucleocapsid protein and non-structural protein genes, complete cds
+----------------------------------------------------------------GUAGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA------AAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUACAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAACAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCCGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAC
+AAAAUAUAAUAUAAAAUACAAAAAGAAAUAAAAUAACAAAUACAAAAACAUAAAAAUAUAUAAAAUAAAUAAAAAGU---
+-----------------GCGAAAGCACAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUUGG-------------------------------
+>KC759127 Oropouche virus strain IQT-1690 segment S nucleocapsid protein (N) and nonstructural protein (NS) genes, complete cds
+------------------------------------------------------------------AGUAGUGUGCUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUUAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCUUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGAUUUGCUGCCGGUGCCGAGAUGUUUUUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACA----------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MK643115 Oropouche orthobunyavirus strain FCT00025/COL/2018 nucleoprotein (N) and nonstructural protein (NS) genes, complete cds
+-----------------------------------------------------------------------UGUACUCCA
+CAAUUCAAAACAUAAAAAGA------AAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+W-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACGUCGCGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAAUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUGG-UGCCUUUGGCAGAGGUGAAGGGUUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUCCUCAAGGACGGCAUGGAUGUCAAUUUCAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUUGACAUAUAGUGAAGUACAAUAAACAAAC
+AAAAUAUAAUAUAAAAUACARAA---------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF926352 Oropouche virus strain OROV/EC/Esmeraldas/087/2016 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA------AAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACGUCGCGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAAUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUGG-UGCCUUUGGCAGAGGUGAAGGGUUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUCCUCAAGGACGGCAUGGAUGUCAAUUUCAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAC
+AAAAUAUAAUAUAAAAUACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAA--
+--------AAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP795089 Oropouche virus strain TVP-19257/IQT-1690 structural nucleocapsid protein and non-structural protein genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUUAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCUUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGAUUUGCUGCCGGUGCCGAGAUGUUUUUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAACAAAAAAG---
+---------------UGCGAAAGCACAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGG------------------------------
+>AF164549 Oropouche virus strain IQT1690 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCUUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGAUUUGCUGCCGGUGCCGAGAUGUUUUUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747593 Oropouche virus isolate BeH 708139 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUUAAUAA-------UGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCAAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUAUAAUAAACAAAU
+AAAAUAUAAAAUACCAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAA-A---
+------A----AAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747587 Oropouche virus isolate PMOH 682426 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUUAAUAA-------UGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUGAUGGAGUAUAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAAA-A---
+------A-----AGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470135 Oropouche virus strain BeH708139 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCAAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830475 Oropouche virus isolate H708139 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCAAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>EF467371 Oropouche virus strain PMOH 682426 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUGA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747599 Oropouche virus isolate BeH 708717 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUUAAUAA-------UGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUAUAAUAAACAAAU
+AAAAUAUAAAAUACCAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAACAAA-A---
+------A----AAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470138 Oropouche virus strain BeH708717 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUGCUCCA
+CAAUUCAAAACAUAAAAAGA------AACUCCAAUA------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGCACACUACU-----
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470136 Oropouche virus strain BeH707157 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUGCUCCA
+CAAUUCAAAACAUAAAAAGA------AACUCCAAUA------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAC-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGCACACUACU-----
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830477 Oropouche virus isolate H708717 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830476 Oropouche virus isolate H707157 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAC-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP795098 Oropouche virus strain TVP-19260/MD-203 structural nucleocapsid protein and non-structural protein genes, complete cds
+---------------------------------------------------------------------------CUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAGGAAUAAAAUGACAAAAAUACAAAAAAAACUAAAAAACAUAUAAAAUAAAUAAA-A---
+------A----AAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUGAAUUGGGA-------------------------------
+>KP795080 Oropouche virus strain TVP-19250/GML-444839 structural nucleocapsid protein and non-structural protein genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUACAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAG
+ACUGCUGAGCAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAA-----------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF697144 Iquitos virus isolate IQT9924 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCAUCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAA---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACG--UUCACUUUUUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUCAUGAAGAAAGUCCUCCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAC
+AAAAUAUAAUAUAAAAUAC---------AAAAAAAGAAAUAAAAUAAUAAAAAAUACAAAAAAACUAAAAAAUCUAUAAA
+AUAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KF150525 Iquitos virus strain IQE1704/PER/05 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGA----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUGG-UGCCUUUAGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACG--UUCACUUUUUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUUAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGACAGAGGUAUGGCCAGAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACCGGGUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF150523 Iquitos virus strain IQE1217/PER/05 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGA----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUAGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACG--UUCACUUUUUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUUAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGACAGAGGUAUGGCCAGAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACCGGGUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF150522 Iquitos virus strain IQE1005/PER/05 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGA----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUAGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACG--UUCACUUUUUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUUAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGACAGAGGUAUGGCCAGAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACCGGGUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164543 Oropouche virus strain BeH505663 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------GGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGGAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747596 Oropouche virus isolate BeH 707287 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAAUUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUAUAAUAAACAAAU
+AAAAUAUAAAAUACCAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAACAAA-A---
+------A----AAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470137 Oropouche virus strain BeH707287 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAAUUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP795092 Oropouche virus strain TVP-19258/IQT-4083 structural nucleocapsid protein and non-structural protein genes, complete cds
+------------------------------------------------------------------AGUAGUGUGCUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGGCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAGGAAUAAAAUGACAAAAAUACAAAAAAACUAAAAAACAUAUAAAAUAAAUAAAA-A---
+------A-----AGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUA----------------------
+>MG747605 Oropouche virus isolate BeH 505768 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUACACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAACAAGCCGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCA
+UUGAGAUGCACAGGGUCCUCAAAGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAGGAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAACAUAUAAAAUAAAUAAAA-A---
+------A-----AGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747590 Oropouche virus isolate PMOH 682431 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAAUUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGGAUAUGAUGGAGUAUAAUAAACAAAU
+AAAAUAUAAAAUACCAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAACAAA-AA--
+------A-----AGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747548 Oropouche virus isolate BeH 355173 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUCAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUGAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUCGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAGGAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAAA-A---
+------A-----AGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MH331909 Peaton virus nucleocapsid protein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----UCUUACAUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCGGGAUAUUUAGCCAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---CCAAAUAAAACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACCGA
+GGGGCUGACCAUGUAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUUUAGUUA
+UUGACAUGCAUAGAGUACUAAAAGAUGGGAUGGAUGUCAACUUUAUGAGAAAGGUCCUCCGCCAACGUUAUGGUACAUUA
+ACUGCAGAGCAAUGGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUUAAUGCUGUUGGACAAUUAAGCUGGGCCA
+A-------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP795095 Oropouche virus strain TVP-19259/IQT-7085 structural nucleocapsid protein and non-structural protein genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUUAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAAAAAAGU
+GCGAAAGCACAAAAAAAGAACUGCAG------------------------------------------------------
+---------------------------------------------------------------
+>KJ866386 Iquitos virus strain MIS-0397 nucleocapsid protein and nonstructural protein genes, complete cds
+----------------------------------------------------------------GUAGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA------AAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCAAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUUUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUCAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAAGUGAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUCAUGAAGAAAGUCCUCCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAACAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGACUUU-UUGCGUCAAUUUGGAAUUGACAUAUAGUGGAGUACAAUAAGCAAAG
+AAAAUAUAAUAUAAAAUACAAAAAGAAAUAAAAUAACAAAAAUACAAAAACUAAAAAUAUAUAAAAUAAAUAAAAAG---
+----------------UGCGAAAGCACAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGG-------------------------------
+>HM470141 Oropouche virus strain BeH505768 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUACACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAACAAGCCGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCA
+UUGAGAUGCACAGGGUCCUCAAAGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470112 Oropouche virus strain BeH244576 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUCCACCGCCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGAGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCCGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470114 Oropouche virus strain BeH355173 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUCAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUGAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUCGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830459 Oropouche virus isolate H505768 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUACACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAACAAGCCGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCA
+UUGAGAUGCACAGGGUCCUCAAAGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830444 Oropouche virus isolate H244576 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUCCACCGCCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGAGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCCGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>EF467372 Oropouche virus strain PMOH 682431 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAAUUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGGAUAUGA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164550 Oropouche virus strain MD023 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUUAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470133 Oropouche virus strain BeH706890 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUGCUCCA
+CAAUUCAAAACAUAAAAAGA------AACUCCAAUA------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGCACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUCAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUACGGCAGAGGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGCACACUACU-----
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830473 Oropouche virus isolate H706890 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGCACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUCAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUACGGCAGAGGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH484293 Buttonwillow virus strain A 7956 segment S, complete sequence
+----------------------------------------------------------------------GUGUGCUCCA
+CAAUUCAAAAACAAAAAGU------CUAAUUAAACA------AUGUC---------UGAGUUCAUCUUUAAUGAUGUACC
+U-CAACGGUCUACAUCUACGUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCAGUACAGAGCA--AGCCUCAGCG
+UUAGUGUCGCUAGAAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUC-UACGUCAGACGUCACAACCAAA-----U
+GUCAAUCUUACUUUUGGCCAGUCAGUC-----UUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCGGU
+GCCAGAUAACGGUCUUACCCUGCACCGCCUCUCCGGUUACCUUGCGAGAUGGUUAAUGGAUCAG---AU-CAG--GGUUG
+GAGGUUCUGUACGAGAGGCAGAAAUUAGGGGAGCAAUAGUG-AUACCACUUGCAGAAAUAAAAGGCUGCACUUGGAAUGA
+UGGCAAUGCUAUGUAUUUGGCAUUUGCUGCUGGGACAGAAAUGUUUCUGCAG-ACA--UUUACAUUCUUCCCAUUAGCAA
+UUGAAAUGCAACGCGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAAGAAAGUAAUAAGGCAGAGAUAUGGGACACUA
+ACUGCUGAGCAAUGGAUGAGACAGGAGGUGACUGCAG-UCACAGCAGCAUUUAAUGCUGUUGGAUUGCUGCCUUGGGCU-
+AGAUCUGGAUUCUCUCCAGUGGCUAGAGAG-UUCUUGAGGAACUUUGGUAUUAAUAUCUAAGCGGGGUAAAUAAAAUAAA
+AAAUAUAAAACAAAAAAUACAAAAAAAUAAUAAAAAUAUAAAAAUCCAAAAAAAUAGUAGUGUUUAGAUUUCUAAACACU
+-----------------A------CACAAAAUCAGCUGCAAAUGGGUUGGGUGGUUGGGGCAAAUCACAGUCUAAAUCAU
+UUUAUGUUCAUUAUCAUUAUUUUUGAAUUGGGAGCA---------------------------
+>MG747569 Oropouche virus isolate BeH 541140 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUCCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAGGAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAACAUAUAAAAUAAAUAAAAAA---
+------A------GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP795074 Oropouche virus strain TVP-19244/DEI-216 structural nucleocapsid protein and non-structural protein genes, complete cds
+---------------------------------------------------------------------------CUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAA---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUAUAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAAUAAAAAAAG
+UGACGAAAAGCACAAAAAAAGAAACUGCAGCU------------------------------------------------
+---------------------------------------------------------------
+>KF697146 Madre de Dios virus isolate FMD 1303 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGCCAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAAGAU-GUCUUACGUAAGACGUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCAAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCUGGAUACUUAGCACGCUGGGCUUUUACCCAA---AUGA----GGUCA
+-----CCCAUCAAACAGGCUGAGUUUAGGGCUACUGUAGUUG-UGCCCCUUGCAGAAGUGAAAGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACUUAGGGUUUGCAGCUGGUGCUGAGAUGUUCUUGCAA-ACA--UUCACCUUUUUCCCUCUGGUGA
+UUGAAAUGCACAGAGUUCUCAAGGAUGGCAUGGAUGUCAACUUCAUGAAGAAAGUUCUUCGACAGCGGUAUGGCCAAAAG
+ACUGCUGAGCAGUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+CGGACUGGAUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAACAGAUAAGU
+AAAAUAUAUAAAAUAAAAAAAAGAUAAAAAUAAUAAAAAUACAAAAAAAGUAAAAAAUAUAAAAUAAAAUAAAAA-A---
+------A------GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUUCAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UAUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KF150535 Iquitos virus strain IQE3728/PER/06 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAA---AUGA----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUAGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCCGGUACUGAGAUGUUUCUGCAG-ACG--UUCACUUUUUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUUAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGACAGAGGUAUGGCCAGAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACCGGGUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470142 Oropouche virus strain BeH505805 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470126 Oropouche virus strain BeH541140 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUCCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830460 Oropouche virus isolate H505805 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY237111 Oropouche virus segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUGCUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAGAGGUAUGGUCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGCACACUACU-----
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164554 Oropouche virus strain IQT7085 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164551 Oropouche virus strain DEI209 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAA---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164535 Oropouche virus strain BeH381114 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGUCAAAAA
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUUGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164532 Oropouche virus strain BeAn19991 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAGAGGUAUGGUCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470134 Oropouche virus strain BeH706893 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUGCUCCA
+CAAUUCAAAACAUAAAAAGA-----AACUCCAAUAA-------UGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGCACUACAUCCACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUCAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGCCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUCGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUACGGCAGAGGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGCACACUACU-----
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830474 Oropouche virus isolate H706893 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGCACUACAUCCACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUCAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGCCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUCGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUACGGCAGAGGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164542 Oropouche virus strain BeH505442 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAAUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-GCA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAAUUUUAUGAAAAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>NC_043598 Buttonwillow virus isolate BFS 5002 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAAACAAAAAGU------CUAAUUAAACA------AUGUC---------UGAGUUCAUCUUUAAUGAUGUACC
+U-CAACGGUCUACAUCCACGUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCAGUACAGAGCA--AGCCUCAGCG
+UUAGUGUCGCUAGAAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUC-UACGUCAGACGUCACAACCAAA-----U
+GUCAAUCUUACUUUUGGCCAGUCAGUC-----UUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCGGU
+GCCAGAUAACGGUCUUACCCUGCACCGCCUCUCCGGUUACCUUGCGAGAUGGUUAAUGGAUCAG---AU-CAG--GGUUG
+GAGGUUCUGUACGAGAGGCAGAAAUUAGGGGAGCAAUAGUG-AUACCACUUGCAGAAAUAAAAGGCUGCACUUGGAAUGA
+UGGCAAUGCUAUGUAUUUGGCAUUUGCUGCUGGGACAGAAAUGUUUCUGCAG-ACA--UUUACAUUCUUCCCAUUAGCAA
+UUGAAAUGCAACGCGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAAGAAAGUAAUAAGGCAGAGAUAUGGGACACUA
+ACUGCUGAGCAAUGGAUGAGACAGGAGGUGACUGCAG-UCACAGCAGCAUUUAAUGCUGUUGGAUUGCUGCCUUGGGCU-
+AGAUCUGGAUUCUCUCCAGUGGCUAGAGAG-UUCUUGAGGAACUUUGGUAUUAAUAUCUAAGCGGGGUAAAUAAAAUAAA
+AAAUAUAAAACAAAAAAUACAAAAAAAUAAUAAAAAUAUAAAAAUCCAAAAAAAUAGUAGUGUUUAGAUUUCUAAACACU
+ACACAAAAUCAGCUGCAAAUGGGUUGGGUGGUUGGGGCAAAUCACAGUCUAAAUCAUUUUAUGUUCAUUAUCAUUAUUUU
+UGAAUUUGGAAGCACACUACU------------------------------------------
+>KF697162 Buttonwillow virus isolate BFS 5002 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAAACAAAAAGU------CUAAUUAAACA------AUGUC---------UGAGUUCAUCUUUAAUGAUGUACC
+U-CAACGGUCUACAUCCACGUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCAGUACAGAGCA--AGCCUCAGCG
+UUAGUGUCGCUAGAAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUC-UACGUCAGACGUCACAACCAAA-----U
+GUCAAUCUUACUUUUGGCCAGUCAGUC-----UUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCGGU
+GCCAGAUAACGGUCUUACCCUGCACCGCCUCUCCGGUUACCUUGCGAGAUGGUUAAUGGAUCAG---AU-CAG--GGUUG
+GAGGUUCUGUACGAGAGGCAGAAAUUAGGGGAGCAAUAGUG-AUACCACUUGCAGAAAUAAAAGGCUGCACUUGGAAUGA
+UGGCAAUGCUAUGUAUUUGGCAUUUGCUGCUGGGACAGAAAUGUUUCUGCAG-ACA--UUUACAUUCUUCCCAUUAGCAA
+UUGAAAUGCAACGCGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAAGAAAGUAAUAAGGCAGAGAUAUGGGACACUA
+ACUGCUGAGCAAUGGAUGAGACAGGAGGUGACUGCAG-UCACAGCAGCAUUUAAUGCUGUUGGAUUGCUGCCUUGGGCU-
+AGAUCUGGAUUCUCUCCAGUGGCUAGAGAG-UUCUUGAGGAACUUUGGUAUUAAUAUCUAAGCGGGGUAAAUAAAAUAAA
+AAAUAUAAAACAAAAAAUACAAAAAAAUAAUAAAAAUAUAAAAAUCCAAAAAAAUAGUAGUGUUUAGAUUUCUAAACACU
+ACACAAAAUCAGCUGCAAAUGGGUUGGGUGGUUGGGGCAAAUCACAGUCUAAAUCAUUUUAUGUUCAUUAUCAUUAUUUU
+UGAAUUUGGAAGCACACUACU------------------------------------------
+>MG747602 Oropouche virus isolate BeH 498913 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUCAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAAGAAAUAAUAUAACAAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAA-A---
+---------AAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP795077 Oropouche virus strain TVP-19249/GML-444672 structural nucleocapsid protein and non-structural protein genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAA-----
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP691623 Oropouche virus isolate BeH759620 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUUCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAGCAAAU
+AAAAUAUAAAAUACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAAAAAAGU
+----------------GCGAAAGCACAAAAAAGAACUGCAGCUGUAAUAUUACAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KC759130 Oropouche virus strain GML-444479 segment S nucleocapsid protein (N) and nonstructural protein (NS) genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACA----------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470140 Oropouche virus strain BeH505764 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUCUCGGGAUACCUAGCUCGGUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAAAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470139 Oropouche virus strain BeH498913 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUCAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830478 Oropouche virus isolate H758687 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUUGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830458 Oropouche virus isolate H505764 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUCUCGGGAUACCUAGCUCGGUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAAAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830457 Oropouche virus isolate H498913 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUCAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164555 Oropouche virus strain GML444477 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164553 Oropouche virus strain 01-812-98 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164536 Oropouche virus strain BeH390233 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAACAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGGGCCAAUUCGGAAUUGGGAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF620127 Oropouche virus culture NCPV:1409261v segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACUCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACG--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUCUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP026181 Oropouche virus strain TRVL9760 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACUCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACG--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUCUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KC759124 Oropouche virus strain TRVL-9760 segment S nucleocapsid protein (N) and nonstructural protein (NS) genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACUCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACG--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACA----------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164531 Oropouche virus strain TRVL9760 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACUCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACG--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747581 Oropouche virus isolate PPS 522 H 669314 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUCCAACGAUGUACC
+A-CAUCGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGUCAAAAA
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUUGCAUAUGAUGGAGUACAGUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747551 Oropouche virus isolate BeAr 366927 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUACUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGGGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAGGAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAACAUAUAAAAUAAAUAAAAAA---
+------A------GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747512 Oropouche virus isolate BeH 472433 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUCGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUGAACUUUAUGAAGAAAGUUCUACGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAAGAAAUAAUAUAACAAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAA-A---
+---------AAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP691629 Perdoes virus isolate BeAn790177 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAGCAAAU
+AAAAUAUAAAAUACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAAAAA---
+------A------GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUACAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP691632 Oropouche virus isolate BeH759146 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAGCAAAU
+AAAAUAUAAAAUACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAAAAAAGU
+----------------GCGAAAGCACAAAAAAGAACUGCAGCUGUAAUAUUACAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP052852 Oropouche virus strain BeAn19991 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAGUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KJ866389 Madre de Dios virus strain INHRR 17a-10 structural nucleocapsid protein and nonstructural protein genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGCCAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAAAAGGCCAAAGAU-GUCUUACGUAAGACGUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCAAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCUGGAUACUUAGCACGCUGGGCCUUUACCCAA---AUGA----GGUCA
+-----CCCAUCAAACAGGCUGAGUUUAGGGCUACUGUAGUUG-UGCCCCUUGCAGAAGUGAAAGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACUUAGGGUUUGCAGCUGGUGCUGAGAUGUUCUUGCAA-ACA--UUCACCUUUUUCCCUCUGGUGA
+UUGAAAUGCACAGAGUUCUCAAGGAUGGCAUGGAUGUCAACUUCAUGAAGAAAGUUCUUCGACAGCGAUAUGGCCAAAAG
+ACUGCUGAGCAGUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+CGGACUGGAUUCUCUCCAGCAGCAAGAGA-UUUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAACAGAUAAGU
+AAAAUAUAUAAAAUACAAAAAAAGAUAAAAAUAAUAAAAAUACAAAAAAAAGUAAAAAAUAUAAAAUAAAAUAAAAAAA-
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470117 Oropouche virus strain BeAr366927 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUACUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGGGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470105 Oropouche virus strain BeH472433 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUCGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUGAACUUUAUGAAGAAAGUUCUACGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830491 Oropouche virus isolate H759044 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830489 Oropouche virus isolate H759042 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGUUUCUCCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830488 Oropouche virus isolate H759041 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAACGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830486 Oropouche virus isolate H759018 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACCACCUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830485 Oropouche virus isolate H759562 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830484 Oropouche virus isolate H759038 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCGUGGGCC-
+AGGACUGGAUUCUCCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830483 Oropouche virus isolate H75955 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGACAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830481 Oropouche virus isolate H759541 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830472 Oropouche virus isolate H543880 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830455 Oropouche virus isolate H472433 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUCGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUGAACUUUAUGAAGAAAGUUCUACGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830448 Oropouche virus isolate AR366927 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUACUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGGGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830445 Oropouche virus isolate H271078 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>EF467370 Oropouche virus strain PPS 522 H 669314 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUCCAACGAUGUACC
+A-CAUCGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGUCAAAAA
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUUGCAUAUGA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY704565 Oropouche virus strain BeH 543880 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164557 Oropouche virus strain GML445252 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGUUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164556 Oropouche virus strain GML444911 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGUUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUUACAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164552 Oropouche virus strain IQT4083 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUUAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAGGUAUGGCAAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164533 Oropouche virus strain BeH271815 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747575 Oropouche virus isolate BeH 543760 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAU
+AAAAUAUAAAACACAAAAACAAAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAA---
+------A------GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747572 Oropouche virus isolate BeH 543629 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAU
+AAAAUAUAAAACACAAAAACAAAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAAA--
+------G-------UGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747521 Oropouche virus isolate BeAn 626990 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAAGAAAUAAUAUAACAAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAA-A---
+---------AAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747503 Oropouche virus isolate BeH 543100 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUUC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCGACUGUGGUAG-UGCCUUUGGCAGAGGUCAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUCCAG-ACA--UUCACUUUCUUCCCUUUAGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAAUACAAAAAAAAGAAAUAAAAUAACAAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAA-A---
+---------AAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP795104 Oropouche virus strain TVP-19264/PAN-481126 structural nucleocapsid protein and non-structural protein genes, complete cds
+CAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAAAACGUAUUUUUAGUAGUGUGCUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAGUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUUUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUACAA-ACA--UUCACUUUCUUUCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGAUAUAUAGUGGAGUACAGCAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAAAAUUAAAAAUAUAUAAAAU-
+-AAAUAAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAG-----------------------
+---------------------------------------------------------------
+>KP795083 Oropouche virus strain TVP-19254/GML-480914 structural nucleocapsid protein and non-structural protein genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAGUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUUUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUACAA-ACA--UUCACUUUCUUUCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGAUAUAUAGUGGAGUACAGCAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAAAUUAAAAAUAUAUAAAA---
+UAAAUAAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUG--------------
+---------------------------------------------------------------
+>HM470115 Oropouche virus strain BeH355186 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCAUUUUCAGCGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470113 Oropouche virus strain BeAr271708 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGCAAGACAUCCAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCUUACACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCAGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUACUUCGGCAAAAGUAUGGCCAAAAG
+ACUGCUGAACAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGGGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470102 Oropouche virus strain BeH543100 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUUC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCGACUGUGGUAG-UGCCUUUGGCAGAGGUCAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUCCAG-ACA--UUCACUUUCUUCCCUUUAGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830487 Oropouche virus isolate H759023 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830470 Oropouche virus isolate H543760 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830466 Oropouche virus isolate H543100 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUUC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCGACUGUGGUAG-UGCCUUUGGCAGAGGUCAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUCCAG-ACA--UUCACUUUCUUCCCUUUAGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>EF467368 Oropouche virus strain BeH 622544 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAGCGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY704568 Oropouche virus strain BeH 543760 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY704567 Oropouche virus strain BeH 543790 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY704563 Oropouche virus strain BeH 543629 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY117135 Oropouche virus strain BeAn 626990 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUGCUCCA
+CAAUUCAAAACAUAAAAAGA-----AACUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGCACACUACU-----
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164558 Oropouche virus strain GML450093 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGA
+CGGUGACGCAAUGUAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGGUUCUCUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164541 Oropouche virus strain BeH504514 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAGCGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164534 Oropouche virus strain BeH379693 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAGGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164546 Oropouche virus strain BeH544552 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAAUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF312382 Jatobal virus nucleoprotein (N) gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAAUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAAGUGAAAGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUAUCUGGGGUUUGCUGCCGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAAAAAGUCCUCCGGCAAAAGUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAAUUGCUG-UAAAAACAACUUUUGAAGCUUUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAAUCUCCCCAGCAGCAAAAAAC-UUCUUGCGCCAAUUCGAAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG764559 Akabane virus strain URF-D4cot-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG764556 Akabane virus strain KMR-21Cl-TR2016 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595774 Akabane virus strain ANT-Clng21-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595773 Akabane virus strain KRK-Cs34J-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595772 Akabane virus strain KRK-Cs34E-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595771 Akabane virus strain KRK-Cs34I-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595768 Akabane virus strain ALT-6CKLOK-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595767 Akabane virus strain ALT-3CKLOK-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595766 Akabane virus strain ALT-10KLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595765 Akabane virus strain ALT-6KLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595763 Akabane virus strain CYR-S235LOK-TR2017 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595762 Akabane virus strain CYR-S230LOK-TR2017 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595761 Akabane virus strain ANT-S175LOK-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595760 Akabane virus strain ANT-S174LOK-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595759 Akabane virus strain SDG-S114LOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595758 Akabane virus strain ANT-S47LOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747542 Oropouche virus isolate BeAn 208402 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCGCUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUKGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAGUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAACUGUAGGCACUUUCGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUCUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>AY993910 Oropouche virus isolate BeAn 208402 nucleocapsid protein and non-structural protein mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCGCUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUKGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAGUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAACUGUAGGCACUUUCGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747584 Oropouche virus isolate PPS 523 H 669315 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUCCAACGAUGUACC
+A-CAUCGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGUCAAAAA
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUUGCAUAUAGUGGAGUACAGUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747578 Oropouche virus isolate BeH 543857 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAU
+AAAAUAUAAAACACAAAAAAAAAAAAAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAAUAAAUAAAAAAA--
+------G-------UGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747536 Oropouche virus isolate BeAr 136921 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACU--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGCUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470111 Oropouche virus strain BeAr136921 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACU--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGCUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830482 Oropouche virus isolate H759531 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAGGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AGUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830480 Oropouche virus isolate H759525 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAGGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830479 Oropouche virus isolate H758669 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUACUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCGAUGUAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAA
+UUGAGAUGCACAGGGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAG
+ACUGCUGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830471 Oropouche virus isolate H543857 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830469 Oropouche virus isolate H543639 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830468 Oropouche virus isolate H543638 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGAAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830443 Oropouche virus isolate AR136921 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGU
+GCCGGACAACGGUCUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACU--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGCUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>EF467369 Oropouche virus strain PPS 523 H 669315 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUCCAACGAUGUACC
+A-CAUCGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGUCAAAAA
+ACUGCUGAACAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUUGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY704566 Oropouche virus strain BeH 543857 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY704564 Oropouche virus strain BeH 543638 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY704562 Oropouche virus strain BeH 543639 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY704561 Oropouche virus strain BeH 543745 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGAAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164548 Oropouche virus strain BeH543618 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGC---------AAGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164540 Oropouche virus strain BeH475248 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAACGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164538 Oropouche virus strain BeH472204 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGUCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164537 Oropouche virus strain BeH472200 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------GGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAACGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747518 Oropouche virus isolate BeH 421086 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAUCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUACAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUCCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAU
+AAAAUAUAAAACACAAAAACAAAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAAA--
+------G-------UGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>AY704559 Oropouche virus strain BeH 521086 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAUCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUACAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUCCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747545 Oropouche virus isolate BeAn 208819 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAGUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUCUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747539 Oropouche virus isolate BeAn 206119 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCGCUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAGUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAACUGUAGGCACUUUCGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUCUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747530 Oropouche virus isolate BeH 29090 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUUGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----G
+GUUGACCUUACUUUUGGUCGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUGCCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GUUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGCACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUCGCUG-UUAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUCUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747527 Oropouche virus isolate BeH 29086 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUUGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----G
+GUCGACCUUACUUUUGGUCGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUGCCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GUUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGCACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUCA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUCGCUG-UUAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUCUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747524 Oropouche virus isolate BeAr 19886 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUUGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUGG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUGAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUCUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470109 Oropouche virus strain BeH29090 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUUGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----G
+GUUGACCUUACUUUUGGUCGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUGCCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GUUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGCACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUCGCUG-UUAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470108 Oropouche virus strain BeH29086 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUUGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----G
+GUCGACCUUACUUUUGGUCGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUGCCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GUUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGCACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUCA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUCGCUG-UUAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470107 Oropouche virus strain BeAr19886 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCCAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUUGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUGG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUGAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY993911 Oropouche virus isolate BeAn 208819 nucleocapsid protein and non-structural protein mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAGUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY993909 Oropouche virus isolate BeAn 206119 nucleocapsid protein and non-structural protein mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCGCUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAGUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAACUGUAGGCACUUUCGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164547 Oropouche virus strain BeH543087 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164545 Oropouche virus strain BeH543033 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAA-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747506 Oropouche virus isolate BeH 389865 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGAAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUACACCGUCUGUCCGGUUACCUAGCUCGCUGGGCAUUUACCCAC---AUGA----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUUGUAG-UGCCUUUGGCGGAGGUCAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGUUUUGCUGCAGGUGCUGAGAUGUUUCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGAAUGGAUGUCAACUUUAUGAAGAAAUUCCUCCGGCAGCGCUAUGGACAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUACUAGCUG-UAAAAGCAGCUUUUGAAUCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGCUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGCAAUUGGCAUAUAGUGGAGUACAAUAAGCAAAG
+AAAAUAUAAUAUAAAAUACAAAAAGAAAUAAAAUAACAAAAAUACAAAAACUAAAAAUAUAUAAAAUAAAUAAAAAG---
+----------------UGCGAAAGCACAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470103 Oropouche virus strain BeH389865 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGAAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUACACCGUCUGUCCGGUUACCUAGCUCGCUGGGCAUUUACCCAC---AUGA----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUUGUAG-UGCCUUUGGCGGAGGUCAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGUUUUGCUGCAGGUGCUGAGAUGUUUCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGAAUGGAUGUCAACUUUAUGAAGAAAUUCCUCCGGCAGCGCUAUGGACAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUACUAGCUG-UAAAAGCAGCUUUUGAAUCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGCUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGCAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830453 Oropouche virus isolate H389865 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGAAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUACACCGUCUGUCCGGUUACCUAGCUCGCUGGGCAUUUACCCAC---AUGA----GGUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUUGUAG-UGCCUUUGGCGGAGGUCAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGUUUUGCUGCAGGUGCUGAGAUGUUUCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUCCUCAAGGACGGAAUGGAUGUCAACUUUAUGAAGAAAUUCCUCCGGCAGCGCUAUGGACAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUACUAGCUG-UAAAAGCAGCUUUUGAAUCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGCUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGCAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF362398 Buttonwillow virus strain A7956 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------UGAGUUCAUCUUUAAUGAUGUACC
+U-CAACGGUCUACAUCCACGUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCAGUACAGAGCA--NGCCUCAGCG
+UUAGUGUCGCUAGAAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUC-UACGUCAGACGUCACAACCAAA-----U
+GUCAAUCUUACUUUUGGCCAGUCAGUC-----UUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCGGU
+GCCAGAUAACGGUCUUACCCUGCACCGCCUCUCCGGUUACCUUGCGAGAUGGUUAAUGGAUCAG---AU-CAN--GGUUG
+GAGGUUCUGUACGAGAGGCAGAAAUUAGGGGAGCAAUAGUG-AUACCACUUGCAGAAAUAAAAGGCUGCACUUGGAAUGA
+UGGCAAUGCUAUGUAUUUGGCAUUUGCUGCUGGGACAGAAAUGUUUCUGCAG-ACA--UUUACAUUCUUCCCAUUAGCAA
+UUGAAAUGCAACGCGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAAGAAAGUAAUAAGGCAGAGAUAUGGGACACUA
+ACUGCUGAGCAAUGGAUGAGACACGAGGUGACUGCAG-UCACAGCAGCAUUUAAUGCUGGUGGAUUGCUGCCUUGGGCU-
+AGAUCUGGAUUCUCUUCAAUGGCUAGAAAG-UUCUUGAGGAACUUUGGAAUUAAUAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747533 Oropouche virus isolate BeH 121923 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUUGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----G
+GUUGACCUUACUUUUGGUCGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUGCCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GUUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGCACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUCGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAU
+AAAAUAUAAAACACAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAA---
+-UAAAUAAAAAAAGUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUCUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470110 Oropouche virus strain BeH121923 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUUGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----G
+GUUGACCUUACUUUUGGUCGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUGCCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GUUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGCACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUCGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830467 Oropouche virus isolate H543629 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY704560 Oropouche virus strain BeH 543733 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AY993912 Oropouche virus isolate BeAn 208823 nucleocapsid protein and non-structural protein mRNAs, complete cds
+--------------------------------------------------------------------------------
+---------------------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAG
+ACUGCCGAGCGGUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747509 Oropouche virus isolate BeH 390242 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUGCGAAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUACACCGUCUGUCCGGUUACCUAGCUCGCUGGGCAUUUACCCAC---AUGA----GAUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUUGUAG-UGCCUUUGGCGGAGGUCAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGUUUUGCUGCAGGUGCUGAGAUGUUUCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUGCUCAAGGACGGAAUGGAUGUCAACUUUAUGAAGAAAUUCCUCCGGCAGCGCUAUGGACAAAAG
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUACUAGCUG-UAAAAGCAGCUUUUGAAUCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGCUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGCAAUUGGCAUAUAGUGGAGUACAAUAAGCAAAG
+AAAAUAUAAUAUAAAAUACAAAAAGAAAUAAAAUAACAAAAAUACAAAAACUAAAAAUAUAUAAAAUAAAUAAAAAG---
+----------------UGCGAAAGCACAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470104 Oropouche virus strain BeH390242 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUGCGAAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUACACCGUCUGUCCGGUUACCUAGCUCGCUGGGCAUUUACCCAC---AUGA----GAUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUUGUAG-UGCCUUUGGCGGAGGUCAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGUUUUGCUGCAGGUGCUGAGAUGUUUCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUGCUCAAGGACGGAAUGGAUGUCAACUUUAUGAAGAAAUUCCUCCGGCAGCGCUAUGGACAAAAG
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUACUAGCUG-UAAAAGCAGCUUUUGAAUCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGCUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGCAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830454 Oropouche virus isolate H390242 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUGCGAAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUACACCGUCUGUCCGGUUACCUAGCUCGCUGGGCAUUUACCCAC---AUGA----GAUCA
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUUGUAG-UGCCUUUGGCGGAGGUCAAGGGCUGUACUUGGAAUGA
+UGGUGAUGCAAUGUACCUGGGUUUUGCUGCAGGUGCUGAGAUGUUUCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCACAGGGUGCUCAAGGACGGAAUGGAUGUCAACUUUAUGAAGAAAUUCCUCCGGCAGCGCUAUGGACAAAAG
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUACUAGCUG-UAAAAGCAGCUUUUGAAUCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGCUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGCAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG764558 Akabane virus strain URF-G1cot-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGAUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUG
+ACUGCAGAGGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG764557 Akabane virus strain URF-I2Pcot-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGAUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUG
+ACUGCAGAGGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747557 Oropouche virus isolate BeH 532314 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCAUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAU
+AAAAUAUAAAACACAAAAAAAGAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAA---
+------A------GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470122 Oropouche virus strain BeH532314 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCAUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470120 Oropouche virus strain BeH384193 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGA
+UUGAGAUGCAUAGGGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830461 Oropouche virus isolate H532314 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCAUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830451 Oropouche virus isolate H384193 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGA
+UUGAGAUGCAUAGGGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164544 Oropouche virus strain BeH541863 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAGCGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAACGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGGAAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF164539 Oropouche virus strain BeAr473358 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAU---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAAGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAAAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAAAAAAUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAAUUGCUG-UAAAAACAGCUUUUGAAACUGUAGGCACUCUGGCCUGGGCC-
+AUAACUGGAUUCUCCCCAGCAGCAAGAAAC-UUCUUGCGCCAAUUCGAAAUUGACAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595770 Akabane virus strain KRK-Cs34F-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGAUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCAUUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUG
+ACUGCAGAGGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595769 Akabane virus strain KRK-Cs34G-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGAUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCAUUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUG
+ACUGCAGAGGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG595764 Akabane virus strain ALT-1KLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------AAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGAUAUGCAAUGUACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCAUUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUG
+ACUGCAGAGGAGUGGAUGACAUCUAAGUUGGACGCAGU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF362400 Facey's Paddock virus strain Aus Ch 16129 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGAC---------UGACUUUGUGUUCAACGAUGUACC
+A-CAACGGGCUACGUCUACGUUUGAUCCGGAGGCGGCAUAUGUGGCAUUUGAAAAUCGUUUCAGAGC--GAAUCUCACUG
+UUGAUGUCGCUCGAAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUCUUGC-UAAGACGGCGAGAGCAAC-----U
+GUUGAUAUUACGUUUGGAGGGGUCGUC-----UUUCCAGUGGUUAACAACCAUUAUCCAGAAUACCAACG-GAAUCCGGU
+GCCAGAUGACGGCCUUACCUUGCACAGGCUCUCUGGGUACCUGGCUAGAUGG---UUGAUCGAUC-AAUGCAAU--GCAA
+G---CCCUGUCCGGAUGACCGAGAUCAGGACAAAAGUGAUU-AUUCCUCUUGCAGAAGUGAAAGGUUGCACCUGGAAUGA
+UGGUGCAUCAAUGUACCUCGGAUUUGCUGCUGGAGCUGAAAUGUUUCUCCAGAGC---UUCACAUUCUAUCCUCUAGUGA
+UAGAAAUGCAGAGAGUCUUGAAGGAUGGAAUGGAUGUAAACUUUAUGCGCAAAGUAUUGCGCCAAAGAUAUGGGACCAAA
+ACCGCAGAACAAUGGAUGAGAGAUGACAUCGUUGCAGUUAAAA-CUGCAUUUGAGGCCAUUAAUACAAUCUCAUGGGCC-
+AGAUCUGGAUUCUCUCCUGCUGCAAGAGAG-UUCUUGCGCCAAUUUGGCAUUAACAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG747563 Oropouche virus isolate BeH 532490 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGCCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAAGAUGGCAUGGAUGUUAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUCGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAU
+AAAAUAUAAAACACAAAAAAAAAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAA---
+------A------GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747554 Oropouche virus isolate BeH 385591 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAU
+AAAAUAUAAAACACAAAAACAAAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAA---
+------A------GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747515 Oropouche virus isolate BeH 472435 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUGGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGA
+UUGAGAUGCAUAGGGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAU
+AAAAUAUAAAACACAAAAACAAAAAAAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAAUAAAUAAAAAAA--
+------G-------UGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470124 Oropouche virus strain BeH532490 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGCCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAAGAUGGCAUGGAUGUUAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUCGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470121 Oropouche virus strain BeH385591 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470106 Oropouche virus strain BeH472435 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUGGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGA
+UUGAGAUGCAUAGGGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830463 Oropouche virus isolate H532490 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGCCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAACAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAAGAUGGCAUGGAUGUUAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUCGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830456 Oropouche virus isolate H472435 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUGGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGA
+UUGAGAUGCAUAGGGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830452 Oropouche virus isolate H385591 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF697136 Facey's Paddock virus isolate Aus Ch 16129 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAUC-----------UCCGUAAUAAGAAAAUGAC---------UGACUUUGUGUUCAACGAUGUACC
+A-CAACGGGCUACGUCUACGUUUGAUCCGGAGGCGGCAUAUGUGGCAUUUGAAAAUCGUUUCAGAGC--GAAUCUCACUG
+UUGAUGUCGCUCGAAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUCUUGC-UAAGACGGCGAGAGCAAC-----U
+GUUGAUAUUACGUUUGGAGGGGUCGUC-----UUUCCAGUGGUUAACAACCAUUAUCCAGAAUACCAACG-GAAUCCGGU
+GCCAGAUGACGGCCUUACCUUGCACAGGCUCUCUGGGUACCUGGCUAGAUGG---UUGAUCGAUC-AAUGCAAU--GCAA
+G---CCCUGUCCGGAUGACCGAGAUCAGGACAAAAGUGAUU-AUUCCUCUUGCAGAAGUGAAAGGUUGCACCUGGAAUGA
+UGGUGCAUCAAUGUACCUCGGAUUUGCUGCUGGAGCUGAAAUGUUUCUCCAGAGC---UUCACAUUCUAUCCUCUAGUGA
+UAGAAAUGCAGAGAGUCUUGAAGGAUGGAAUGGAUGUAAACUUUAUGCGCAAAGUAUUGCGCCAAAGAUAUGGGACCAAA
+ACCGCAGAACAAUGGAUGAGAGAUGACAUCGUUGCAGUUAAAA-CUGCAUUUGAGGCCAUCAAUACAAUCUCAUGGGCC-
+AGAUCUGGAUUCUCUCCUGCUGCAAGAGAG-UUCUUGCGCCAAUUUGGCAUUAACAUCUAAA--------------ACAU
+CUAGGAGAUGUUCAAAAAAUAUAAAAAAUAAAAAAACAAAAUAAAAAUAAUAAAAACAAAAAAACACAAAAAAAUAA---
+--------AAGUACUUGGCUUUGCCAAGUACUUAAAAUCAGCUGCUGAGCUCCGGCUUGGGUGGUUGGGGCAAAGUGCUA
+AUUUAAGGCAUUGUAAUUAUUAUUGAAUUGGGAGCACACUACUNGNGNANNCNCAAUA-----
+>MG747560 Oropouche virus isolate BeH 532422 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCCUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCGCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAU
+AAAAUAUAAAACACAAAAACAGAAAAAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAAUAAAUAAAAAAA--
+------G-------UGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470123 Oropouche virus strain BeH532422 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCCUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCGCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470119 Oropouche virus strain BeH384192 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGA
+UUGAGAUGCAUAGGGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470101 Oropouche virus strain BeH543091 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830465 Oropouche virus isolate H543091 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAGCAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830462 Oropouche virus isolate H532422 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCCUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCGCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830450 Oropouche virus isolate H384192 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGGGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGA
+UUGAGAUGCAUAGGGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGGACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470118 Oropouche virus strain BeH366781 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUAGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830449 Oropouche virus isolate H366781 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUAGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>NC_043590 Ingwavuma virus isolate SA An 4165 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAAACUUAAAGUUCUUUAAUAUU-----A-------UGGC------UGAAGCGAUAGUUUUCAAUGAUGUACC
+U-CAACGGACUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUG
+UUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCCAC-----U
+GUCAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCAAAUCCGGU
+UGAUGAUUCAGCCCUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGGUGAUGAC--AUUUUAUGC-----UCAA
+A--GCCCAGUCAACCAGGCUGCUGUGCGUGAGGCAGUUGUG-AUACCUCUGGCUGAGGUCAAGGGUUGCUCAUGGAAUGA
+UGGGCCUGCACUUUAUCUUGGAUUUGCUGCAGGUGCAGAAAUGUUUCUGCAA-ACC--UUCACCUUUUUCCCUCUGGUGA
+UUGAGAUGCACCGUGUUUUGAAAGAUGGCAUGGAAGUAAAUUUCAUGAGGAAGGUUCUGCGCCAACGUUAUGGAGCUCUG
+ACUGCAGAACAAUGGAUGAGGCAGGAGAUUGUGGCUA-UCAGGGCUGCAUUUGAUGCUGUCGGUGCAUUGCCUUGGGCU-
+AAGAGUGGGUUCUCUCCUCUUGCUAGGGAG-UUCCUUGCCCAGUUUGGCAUCAAAAUUUAAA-----AUAUUCAUUAUCA
+AAAUUAUUAACCAAAAAUAUACAAAAAUACAAAAAAAGAAAUAAAAUAUAUAAAAAAACCCCAAAAAAACUAUAAAAAAC
+AAAAAAACAAAAAAAUAGUAGUACUUAGCUUAGCUAAGUACUACAAUAUAAGCAGCUGCUAAAGUCUUUAAAUAUACCUA
+UAUCAGUUUAUAAUACUUGCUGUUUAAUCAUCUUUGAAUUGGGAGCACACUACU---------
+>KF697141 Ingwavuma virus isolate SA An 4165 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAAACUUAAAGUUCUUUAAUAUU-----A-------UGGC------UGAAGCGAUAGUUUUCAAUGAUGUACC
+U-CAACGGACUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUG
+UUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCCAC-----U
+GUCAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCAAAUCCGGU
+UGAUGAUUCAGCCCUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGGUGAUGAC--AUUUUAUGC-----UCAA
+A--GCCCAGUCAACCAGGCUGCUGUGCGUGAGGCAGUUGUG-AUACCUCUGGCUGAGGUCAAGGGUUGCUCAUGGAAUGA
+UGGGCCUGCACUUUAUCUUGGAUUUGCUGCAGGUGCAGAAAUGUUUCUGCAA-ACC--UUCACCUUUUUCCCUCUGGUGA
+UUGAGAUGCACCGUGUUUUGAAAGAUGGCAUGGAAGUAAAUUUCAUGAGGAAGGUUCUGCGCCAACGUUAUGGAGCUCUG
+ACUGCAGAACAAUGGAUGAGGCAGGAGAUUGUGGCUA-UCAGGGCUGCAUUUGAUGCUGUCGGUGCAUUGCCUUGGGCU-
+AAGAGUGGGUUCUCUCCUCUUGCUAGGGAG-UUCCUUGCCCAGUUUGGCAUCAAAAUUUAAA-----AUAUUCAUUAUCA
+AAAUUAUUAACCAAAAAUAUACAAAAAUACAAAAAAAGAAAUAAAAUAUAUAAAAAAACCCCAAAAAAACUAUAAAAAAC
+AAAAAAACAAAAAAAUAGUAGUACUUAGCUUAGCUAAGUACUACAAUAUAAGCAGCUGCUAAAGUCUUUAAAUAUACCUA
+UAUCAGUUUAUAAUACUUGCUGUUUAAUCAUCUUUGAAUUGGGAGCACACUACU---------
+>MG747566 Oropouche virus isolate BeH 532500 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAACAUAAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAGCAAGCAGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGCUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAU
+AAAAUAUAAAACACAAAAAAAAAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAAA--
+------G-------UGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUA
+UGUCAUUUUAGAAAACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470125 Oropouche virus strain BeH532500 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAGCAAGCAGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGCUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830464 Oropouche virus isolate H532500 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----G
+GUUGACCUCACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU
+-----CCAAUUAAGCAAGCAGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUAAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGCUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH999476 Manzanilla orthobunyavirus strain Ingwavuma#2BHK_02:02:96 nucleocapsid protein and NSs genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------UGAAGCGAUAGUUUUCAAUGAUGUACC
+U-CAACGGACUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUG
+UUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCCAC-----U
+GUCAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCAAAUCCGGU
+UGAUGAUUCAGCCCUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGGUGAUGAC--AUUUUAUGC-----UCAA
+A--GCCCAGUCAACCAGGCUGCUGUGCGUGAGGCAGUUGUG-AUACCUCUGGCUGAGGCCAAGGGUUGCUCAUGGAAUGA
+UGGGCCUGCACUUUAUCUUGGAUUUGCUGCAGGUGCAGAAAUGUUUCUGCAA-ACC--UUCACCUUUUUCCCUCUGGUGA
+UUGAGAUGCACCGUGUUUUGAAAGAUGGCAUGGAAGUAAAUUUCAUGAGGAAGGUUCUGCGCCAACGUUAUGGAGCUCUG
+ACUGCAGAACAAUGGAUGAGGCAGGAGAUUGUGGCUA-UCAGGGCUGCAUUUGAUGCUGUCGGUGCAUUGCCUUGGGCU-
+AAGAGUGGGUUCUCUCCUCUUGCUAGGGAG-UUCCUUGCCCAGUUUGGCAUCAAAAUUUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF362395 Ingwavuma virus strain An4165 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CUAUUCAAAAACUUAAAGUUCUUUAAUAUU-----A-------UGGC------UGAAGCGAUAGUUUUCAAUGAUGUACC
+U-CAACGGACUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUG
+UUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCCAC-----U
+GUCAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCAAAUCCGGU
+UGAUGAUUCAGCCCUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGGUAAUGAC--AUUUUAUGC-----UCAA
+A--GCCCAGUCAACCAGGCUGCUGUGCGUGAGGCAGUUGUG-AUACCUCUGGCUGAGGUCAAGGGUUGCUCAUGGAAUGA
+UGGGCCUGCACUUUAUCUUGGAUUUGCUGCAGGUGCAGAAAUGUUUCUGCAA-ACC--UUCACCUUUUUCCCUCUGGUGA
+UUGAGAUGCACCGUGUUUUGAAAGAUGGCAUGGAAGUAAAUUUCAUGAGGAAGGUUCUGCGCCAACGUUAUGGAGCUCUG
+ACUGCAGAACAAUGGAUGAGGCAGGAGAUUGUGGCUA-UCAGGGCUGCAUUUGAUGCUGUCGGUGCAUUGCCUUGGGCU-
+AAGAGUGGGUUCUUUCCUUUUGCUAGGGAG-UUCCUUGCCCAGUUUGGCAUCAAAAUUUAAAAUAUU------CAUUAUC
+AAAAUUAUUAACCAAAAAUAUACAAAAAUACAAAAAAGAAAUAAAAUAUAUAAAAAAACCCCAAAAAAACUAUAAAAAAC
+AAAAAAACAAAAAAAUAGUAGUACUUAGCUUAGCUAAGUACUACAAUAUAAGCAGCUGCUAAAGUCUUUAAAUAUACCUA
+UAUCAGUUUAUAAUACUUGCUGUUUAAUCAUCUUUGAAUGUGGAGCCACACUACU--------
+>LC113954 Akabane virus N, NSs genes for nucleocapsid, non-structural protein, partial cds, strain: WJ-1SA/P/2014
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------CUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUAGCUGAGGUGAAGGGUUGCACCUGGAGUGA
+UGGGUAUGCAAUGUACUUAGGAUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACC--UUCGAGUUUUAUCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUUUUGCGCCAGAGAUACGGGCAGCUG
+ACUGCAGAGGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCC-------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM470116 Oropouche virus strain BeH356898 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCCAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCC
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUAGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUCGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUACGCCAAUUCGGAAUUGGCAUA----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ830447 Oropouche virus isolate H356898 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACC
+A-CAACGGACUACAUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUCGUUAGAGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCCAAUCCAGU
+CCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCC
+-----CCAAUUAAGCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUAGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAA
+ACUGCCGAGCAAUGGAUGCGCGAAGAAAUCGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-
+AGAACUGGAUUCUCCCCAGCAGCAAGAGAC-UUCUUACGCCAAUUCGGAAUUGGCAUAUAG-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH507153 Cat Que virus strain JM1 segment S, complete sequence
+-------------------------------------------------------------------GUAGUGUACUCCA
+CAAUUCAAAAACUUAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACC
+U-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGAGCA--AACCUCACUG
+UUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----U
+GUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGU
+UAACGAUACAGCCCUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUGACCUUC--UAUGC------CCA
+GA-GCCCAGUUAACCAGGCAGCUGUCCGUGAGGCAGUUAUU-AUUCCCCUGGCUGAGGUCAAGGGUUGUUCGUGGGAUGA
+UGGGCCUGCCCUUUACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUUUACAA-ACA--UUUACUUUUUUUCCACUUGUGA
+UUGAGAUGCACCGCGUACUGAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUUCUGCGCCAAAGGUAUGGUGCACUG
+ACUGCAGAACAAUGGAUGAGGCAAGAAAUAGUGGCAA-UUAAGGCAGCAUUUGAGGCUGUUGGUGCACUUCCUUGGGCA-
+AGAACUGGAUUCUCACCAGCUGCCAGGGAA-UUCCUUGCCCAAUUCGGAAUCCGCAUCUAAAUCAGAAAAAGCCCCAUAG
+UUGGAGUACCGAUAAAAUAAAUAAAAAUACAAAAAAAUACAUAAAAUAAUAAAAUGAAAUAAAAAAUAUAAAAUAAUAAA
+AAUAAAAAAAAUAUAGUAGUACUUGGACUAGCCAAGUACUACGACAAUAGCAGCUGCUAAUGUUAUUGUAAGUCCUCUAC
+UUUAGUUUAUAAUAAGGUCUGUAUAAUCAUCUUUGAAUUGGGAGCACAC--------------
+>MH484317 Oya virus strain VN04-2108 segment S, complete sequence
+--------------------------------------------------------------------UAGUGUACUCCA
+CAAUUCAAAAACUUAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACC
+U-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGGGCA--AACCUCACUG
+UUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----U
+GUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGU
+UAACGAUACAGCCCUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGG-------CUGAUGACUUUCUAU--GCCC
+AGAGCCCAGUCAACCAGGCAGCUGUCCGUGAGGCAGUUAUC-AUUCCCCUGGCUGAGGUUAAGGGUUGUUCAUGGGAUGA
+UGGACCUGCCCUCUACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUCUGCAG-ACA--UUUACUUUUUUUCCACUUGUGA
+UUGAGAUGCACCGCGUACUGAAAGAUGGGAUGGAUGUCAACUUUAUGAGAAAAGUUCUGCGCCAACGAUAUGGCGCACUG
+ACUGCAGAACAAUGGAUGAGGCAGGAGAUAGUGGCAA-UUAGGGCAGCAUUUGAGGCUGUUGGCGCACUUCCUUGGGCA-
+AGAACUGGAUUCUCGCCAGCUGCCAGGGAA-UUCCUUGCUCAAUUUGGAAUCCGUAUCUAAAUCAAAAAAAGCCCCCGUA
+GUUGGAGUACCGAUAAAAUAAAUAAAAACACAAAAAAAUACAUAAAAUAAUAAAACAAAAUAAAAAAUAUAAAAAUAAUA
+AAAACAAAAAUAAAAAUAUAGUAGUACUUGGACUAGCCGAGUACUACAACAAUAGCAGCUGCUAAUGUCGUUGUAAGUUC
+UCCACUUCAAUUUAUAAUAAGGUCUGUAUAAUCAUCUUUGAAUUGGGAGC-------------
+>KY795950 Oya virus isolate NIV86209 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAAACUUAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACC
+U-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGAGCA--AACCUCACUG
+UUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----U
+GUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGU
+UAACGAUACAGCCCUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUGACCUUC--UAUGC------CCA
+GA-GCCCAGUUAACCAGGCAGCUGUCCGUGAGGCAGUUAUU-AUUCCCCUGGCUGAGGUCAAGGGUUGUUCGUGGGAUGA
+UGGGCCUGCCCUUUACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUUUACAG-ACA--UUUACUUUUUUUCCACUUGUGA
+UUGAGAUGCACCGCGUACUGAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUUCUGCGCCAAAGGUAUGGUGCACUG
+ACUGCAGAACAAUGGAUGAGGCAGGAGAUAGUGGCAA-UUAGGGCAGCAUUUGAGGCUGUUGGUGCACUUCCUUGGGCA-
+AGAACUGGAUUCUCACCAGCUGCCAGGGAA-UUCCUUGCCCAAUUCGGAAUCCGCAUCUAAAUCAGAAAAAGCCCCA---
+-UAGUUGGAGUACCGAUAAAAUAAAUAAAAACACAAAAAAAUACAUAAAAUAAUAAAACAAAAUAAAAAAUAUAAAAAUA
+AUAAAAAACAAAAAUAAAAAAUAUAGUAGUACUUGGACUAGCCGAGUACUACGACAAUAGCAGCUGCUAAUGUCAUUGUA
+AGUUCUCUACUUUAGUUUAUAAUAAGGUCUGUAUAAUCAUCUUUGAAUUGGGAGCACACUACU
+>JQ675600 Cat Que Virus strain VN04-2108 nucleoprotein gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAAACUUAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACC
+U-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGGGCA--AACCUCACUG
+UUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----U
+GUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGU
+UAACGAUACAGCCCUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGG-------CUGAUGACUUUCUAU--GCCC
+AGAGCCCAGUCAACCAGGCAGCUGUCCGUGAGGCAGUUAUC-AUUCCCCUGGCUGAGGUUAAGGGUUGUUCAUGGGAUGA
+UGGACCUGCCCUCUACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUCUGCAG-ACA--UUUACUUUUUUUCCACUUGUGA
+UUGAGAUGCACCGCGUACUGAAAGAUGGGAUGGAUGUCAACUUUAUGAGAAAAGUUCUGCGCCAACGAUAUGGCGCACUG
+ACUGCAGAACAAUGGAUGAGGCAGGAGAUAGUGGCAA-UUAGGGCAGCAUUUGAGGCUGUUGGCGCACUUCCUUGGGCA-
+AGAACUGGAUUCUCGCCAGCUGCCAGGGAA-UUCCUUGCUCAAUUUGGAAUCCGUAUCUAAAUCAAAAAAAGCCCCCGUA
+GUUGGAGUACCGAUAAAAUAAAUAAAAACACAAAAAAAUACAUAAAAUAAUAAAACAAAAUAAAAAAUAUAAAAAUAAUA
+AAAACAAAAAUAAAAAUAUAGUAGUACUUGGACUAGCCGAGUACUACAACAAUAGCAGCUGCUAAUGUCGUUGUAAGUUC
+UCCACUUCAAUUUAUAAUAAGGUCUGUAUAAUCAUCUUUGAAUUGGGAGCACACUACU-----
+>JX983192 Oya virus strain SC0806 segment S, complete sequence
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAAACUUAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACC
+U-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGGGCA--AACCUCACUG
+UUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----U
+GUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGU
+UAACGAUACAGCCCUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUGACUUUC--UAUGC------CCA
+GA-GCCCAGUCAACCAGGCAGCUGUCCGUGAGGCAGUUAUC-AUUCCCCUGGCUGAGGUUAAGGGUUGUUCAUGGGAUGA
+UGGACCUGCCCUCUACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUCUGCAG-ACA--UUUACUUUUUUCCCACUUGUGA
+UUGAGAUGCACCGCGUACUGAAAGAUGGGAUGGAUGUCAACUUUAUGAGAAAAGUUCUGCGCCAACGAUAUGGCGCACUG
+ACUGCAGAACAAUGGAUGAGGCAGGAGAUAGUGGCAA-UUAGGGCAGCAUUUGAGGCUGUUGGCGCACUCCCUUGGGCA-
+AGAACUGGAUUCUCGCCAGCUGCCAGGGAA-UUCCUUGCUCAAUUUGGAAUCCGUAUCUAAA----UCAAAAAAAGCCCC
+GUAGUUGGAGUACCGAUAAAAUAAAUAAAAACACAAAAAAAUACAUAAAAUAAUAAAACAAAAUAAAAAAUAUAAAAAUA
+AUAAAAAACAAAAAUAAAAAAUAUAGUAGUACUUGGACUAGCCGAGUACUACAACAAUAGCAGCUGCUAAUGUCGUUGUA
+AGUUCUCUACUUCAAUUUAUAAUAAGGUCUGUAUAAUCAUCUUUGAAUUGGGAGCACACUACU
+>JQ029991 Ingwavuma virus strain NIV86627 nucleocapsid protein (N) gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CUAUUCAAAAACUUAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACC
+U-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGAGCA--AACCUCACUG
+UUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----U
+GUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGU
+UAACGAUACAGCCCUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUGACCUUC--UAUGC------CCA
+GA-GCCCAGUUAACCAGGCAGCUGUCCGUGAGGCAGUUAUU-AUUCCCCUGGCUGAGGUCAAGGGUUGUUCGUGGGAUGA
+UGGGCCUGCCCUUUACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUUUACAA-ACA--UUUACUUUUUUUCCACUUGUGA
+UUGAGAUGCACCGCGUACUGAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUUCUGCGCCAAAGGUAUGGUGCACUG
+ACUGCAGAACAAUGGAUGAGGCAAGAAAUAGUGGCAA-UUAAGGCAGCAUUUGAGGCUGUUGGUGCACUUCCUUGGGCA-
+AGAACUGGAUUCUCACCAGCUGCCAGGGAA-UUCCUUGCCCAAUUCGGAAUCCGCAUCUAAAUCAGAAAAAGCCCCAUAG
+UUGGAGUACCGAUAAAAUAAAUAAAAAUACAAAAAAAUACAUAAAAUAAUAAAAUGAAAUAAAAAAUAUAAAAUAAUAAA
+AAUAAAAAAAAUAUAGUAGUACUUGGACUAGCCAAGUACUACGACAAUAGCAGCUGCUAAUGUUAUUGUAAGUCCUCUAC
+UUUAGUUUAUAAUAAGGUCUGUAUAAUCAUCUUUGAAUGUGGAGCCACAC-------------
+>JQ029990 Ingwavuma virus strain NIV86208 nucleocapsid protein (N) gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CUAUUCAAAAACUUAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACC
+U-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGAGCA--AACCUCACUG
+UUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----U
+GUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGU
+UAACGAUACAGCCCUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUGACCUUC--UAUGC------CCA
+GA-GCCCAGUUAACCAGGCAGCUGUCCGUGAGGCAGUUAUU-AUUCCCCUGGCUGAGGUCAAGGGUUGUUCGUGGGAUGA
+UGGGCCUGCCCUUUACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUUUACAA-ACA--UUUACUUUUUUUCCACUUGUGA
+UUGAGAUGCACCGCGUACUGAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUUCUGCGCCAAAGGUAUGGUGCACUG
+ACUGCAGAACAAUGGAUGAGGCAAGAAAUAGUGGCAA-UUAAGGCAGCAUUUGAGGCUGUUGGUGCACUUCCUUGGGCA-
+AGAACUGGAUUCUCACCAGCUGCCAGGGAA-UUCCUUGCCCAAUUCGGAAUCCGCAUCUAAAUCAGAAAAAGCCCCAUAG
+UUGGAGUAC--CGAUAAAAUAAAUAAAAAUACAAAAAAAUACAUAAAAUAAUAAAAUGAAAUAAAAAAUAUAAAAUAAUA
+AAAAUAAAAAAAAUAUAGUAGUACUUGGACUAGCCAAGUACUACGACAAUAGCAGCUGCUAAUGUUAUGUAAGUCCUCUA
+CUUUAGUUUAUAAUACUUGCUGUUUUAAUCAUCA-----------------------------
+>KP016014 Manzanilla virus strain DHL10M107 segment S nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------AGAUGCGAUAGUUUUCAACGAUGUACC
+U-CAGCGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGGGCA--AACCUCACUG
+UUAACACCGCUCGAGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----U
+GUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCGAAUCCGGU
+UAACGAUACAGCCCUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUGACUUUC--UAUGC------CCA
+GA-GCCCAGUCAACCAGGCAGCUGUCCGUGAGGCAGUUAUU-AUUCCCCUGGCUGAGGUUAAGGGUUGUUCAUGGGAUGA
+UGGGCCUGCCCUCUACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUCUGCAG-ACA--UUUACUUUUUUCCCACUUGUGA
+UUGAGAUGCACCGCGUACUGAAAGAUGGGAUGGAUGUCAACUUUAUGAGAAAAGUUCUGCGCCAACGAUAUGGUGCACUG
+ACUGCAGAACAAUGGAUGAGGCAGGAGAUAGUGGCAA-UUAGGGCAGCAUUUGAGGCUGUCGGCGCACUUCCUUGGGCA-
+AGAACUGGAUUCUCGCCAGCUGCCAGGGAA-UUCCUUGCUCAAUUCGGAAUCCGUAUCUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>DQ993248 Akabane virus strain 93 FMX S protein mRNA, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------UGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACUUGGAGUGA
+CGGGUAUGCAAUGUACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUA
+UCGACAUGCACCGUGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUG
+ACUGCAGAAGAGUGGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAU---------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF314813 Schmallenberg virus strain NO/13/04/7678 segment S nucleocapsid protein and non-structural protein genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGU
+GCCAGACAAUGCCAUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUA
+GU-GUCC--UCAAACUAGCAGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCU-
+AAAUCUG-------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF697148 Manzanilla virus isolate TRVL 3586 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCA
+CAAUUCAAAAACUUUAAAUCCUUGAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACC
+U-CAACGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUA
+UUAACACCGCUAGAAUAUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAC-----U
+GUCAAUCUUACUUUUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCAAAUCCGGU
+UAGUGAUACAGCCCUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGG----UUAAUGAC---AUUCUAU-GCCCA
+AA-GCCCUGUCAAUCAGGCUGCUGUUAGAGAAGCAGUAAUU-AUUCCUCUGGCAGAAGUUAAAGGCUGUUCAUGGGAUGA
+UGGGCCUGCACUCUAUCUUGGCUUUGCUUCAGGUGCGGAGAUGUUCUUGCAA-ACA--UUUACUUUCUUUCCCCUAGUCA
+UCGAAAUGCAUAGGGUGUUAAAAGAUGGUAUGGAUGUAAACUUCAUGAGAAAAGUUCUCCGCCAACGCUAUGGGGCCUUA
+ACUGCUGAGCAAUGGAUGAGGCAAGAACUGGUUUCAA-UUCGUGCUGCAUUUGAUGCUGUUGGUGCCUUGCCAUGGGCC-
+CGAACUGGAUUCUCCCCUGCUGCUAGGGAG-UUCCUCGCUCAAUUUGGUAUUCGCAUCUAAAUAUGUGGAGCACAACCUG
+AAUAAAAUACAUAAUAAAUAAAAUGUAAAAAAUAUAUAAAAAAAGUAUAAAAUAUAUAAAAACACAAAAAAACAAAAAAU
+AAAACAAAAAACAAAAAAAUAGUAGUACUUAGGAUAGCUAAGUACUACAACAUUAGCAGCUGCUGACAUUCUUGAAUCAC
+CCAAGUUAAUUUAUAUUAUUUUCUUUUUAAUCAUCUUUGAAUUGGGAGCACACUACU------
+>NC_043596 Utinga virus isolate Be An 84785 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCG
+CAAUUUCAAAACAAAAAAG------AAUUUAUAAAA------AUGGC---------AGAAUUUGUAUUUAAUGAUGUCCC
+C-CAGAGGUCUACAUCAACAUUUGACCCAGAGGUGGCCUAUGCUACUUUUGAAGC--AGCAUUUCGCCAGACUCUAAAUG
+UCAAUGUUGUUAGAGUGUUCUUUUUAAACCAAAAGAAUGCUAAAAAU-GUUUUGAGAAAAACCUCAAGACCAAA-----U
+GUGGACUUGACAUUUGGGGG-----UGCAACCUUUCCAAUUGUCAACAACCAUUUUCCUCAAUUU-CAAUCAAAUCCAGU
+CCCUGACAACGGACUCACUCUCCAUAGAUUGUCAGGCUAUUUAGCUAGAUGGUC---UAUGGAUCAAAUGCGAA---CCA
+A---CCCAAUUCGUCAAGCUGAAUUUAGGGCUGCUGUAGUAG-UCCCUCUUGCUGAAAUUAAGGGGUGCACUUGGAAUGA
+UGGUGAUGCUAUGUACUUAGCCUUUGCUGCAGGAGCUGAAAUGUUUUU--AA-ACACCUUUACUUUUUUCCCGCUGGUUA
+UUGAGAUGCACAGAGUCCUCAAGGAUGGCAUGGAUGUUAAUUUCAUGAGGAAAGUACUAAGACAAAGAUAUGGGACAAAA
+ACAGCUGAGCAAUGGAUGAAGGACGAAAUUAUCCCAA-UCAAGGCAGCCUUUGAAGCUGUUGGUAUGCUGAGCUGGGCU-
+AGAACUGGAUUCUCUCCUGCUGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUCAAUGUCUAAAAAAAGACAUUAC---AAA
+UUAAAAUAAAAUAUAAAAAAAUACAAAAAAAUAAUAAAAAAUAUAAAAAUACAAAAAAAGCACCUUAGGGUGCAAAAGAU
+UAGCUGCUUAAGGGUUGGGUGGUUGGGGACUUAACAAAUCAGCUCAUUGUAUUUAYUUUGAAAUUGGGAGCACACUACU-
+---------------------------------------------------------------
+>KF697156 Utinga virus isolate Be An 84785 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCG
+CAAUUUCAAAACAAAAAAG------AAUUUAUAAAA------AUGGC---------AGAAUUUGUAUUUAAUGAUGUCCC
+C-CAGAGGUCUACAUCAACAUUUGACCCAGAGGUGGCCUAUGCUACUUUUGAAGC--AGCAUUUCGCCAGACUCUAAAUG
+UCAAUGUUGUUAGAGUGUUCUUUUUAAACCAAAAGAAUGCUAAAAAU-GUUUUGAGAAAAACCUCAAGACCAAA-----U
+GUGGACUUGACAUUUGGGGG-----UGCAACCUUUCCAAUUGUCAACAACCAUUUUCCUCAAUUU-CAAUCAAAUCCAGU
+CCCUGACAACGGACUCACUCUCCAUAGAUUGUCAGGCUAUUUAGCUAGAUGGUC---UAUGGAUCAAAUGCGAA---CCA
+A---CCCAAUUCGUCAAGCUGAAUUUAGGGCUGCUGUAGUAG-UCCCUCUUGCUGAAAUUAAGGGGUGCACUUGGAAUGA
+UGGUGAUGCUAUGUACUUAGCCUUUGCUGCAGGAGCUGAAAUGUUUUU--AA-ACACCUUUACUUUUUUCCCGCUGGUUA
+UUGAGAUGCACAGAGUCCUCAAGGAUGGCAUGGAUGUUAAUUUCAUGAGGAAAGUACUAAGACAAAGAUAUGGGACAAAA
+ACAGCUGAGCAAUGGAUGAAGGACGAAAUUAUCCCAA-UCAAGGCAGCCUUUGAAGCUGUUGGUAUGCUGAGCUGGGCU-
+AGAACUGGAUUCUCUCCUGCUGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUCAAUGUCUAAAAAAAGACAUUAC---AAA
+UUAAAAUAAAAUAUAAAAAAAUACAAAAAAAUAAUAAAAAAUAUAAAAAUACAAAAAAAGCACCUUAGGGUGCAAAAGAU
+UAGCUGCUUAAGGGUUGGGUGGUUGGGGACUUAACAAAUCAGCUCAUUGUAUUUAYUUUGAAAUUGGGAGCACACUACU-
+---------------------------------------------------------------
+>MF083647 Aino virus isolate TN-1/AI/M/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+GGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGGAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACACUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083625 Aino virus isolate YL-8/AI/M/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACGUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083634 Aino virus isolate TN-2/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGGUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCCGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ610139 Shuni virus isolate SAE2710 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---UCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGUUGACCAUGUAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUAUGGGACAUUG
+ACUGCAGAACAAUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUCU----------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083646 Aino virus isolate YL-8/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGCGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAG-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083645 Aino virus isolate YL-7/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083642 Aino virus isolate PT-1/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083641 Aino virus isolate TN-9/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083640 Aino virus isolate TN-8/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083638 Aino virus isolate TN-6/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083637 Aino virus isolate TN-5/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083636 Aino virus isolate TN-4/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083635 Aino virus isolate TN-3/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083631 Aino virus isolate YL-5/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083630 Aino virus isolate YL-4/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083629 Aino virus isolate YL-3/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083628 Aino virus isolate YL-2/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UCGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083627 Aino virus isolate YL-1/AI/C/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083624 Aino virus isolate YL-7/AI/M/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+GGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGGAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083621 Aino virus isolate YL-4/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083620 Aino virus isolate YL-3/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083619 Aino virus isolate YL-2/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ610137 Shuni virus isolate SAE1809 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAA
+A---UCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGUUGACCAUGUAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUCCUUCGCCAACGCUAUGGGACAUUG
+ACUGCAGAACAAUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUC----------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH507156 Balagodu virus strain PB1 segment S, complete sequence
+--------------------------------------------------------------------------------
+-------------------AAAACUUAAAGUCCUUUAAUAGUAUGGC------UGAAGCGAUUGUUUUCAAUGAUGUACC
+U-CAACGGGCUCAAUCUACAUUUGAUCCGGAGGCGCAAUAUGUGGCAUUUGAAAAUACAUACCGAGCA--AACCUCACUG
+UUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----U
+GUCAAUCUUACUUUUGGGCAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCAAAUCCGGU
+UGCUGAUACAGCCCUUACCCUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUAACUUUU----UAC----GCCCA
+AA-GUCCAGUCAACCAGGCUGCUGUUCGCGAGGCUGUUAUC-AUUCCUCUGGCAGAGGUUAAAGGCUGUUCAUGGGAUGA
+UGGACCUGCUCUUUAUCUGGGUUUUGCUGCAGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACCUUUUUCCCACUUGUGA
+UUGAGAUGCACCGUGUCCUGAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUGCGUCAGCGCUAUGGCGCACUG
+ACUGCAGAACAAUGGAUGAGGCAGGAGAUAGUGGCCA-UUAGGGCUGCCUUUGAGGCUGUUGGGGCUCUUCCUUGGGCC-
+AGAACUGGAUUCUCUCCAGCUGCCAGGGAA-UUCCUUGCCCAAUUCGGUAUCCGCAUUUAAACGGCUGGUUGAAAUCAUA
+GUAGUUGAUGUAGUGUAAAA------AAAGUAAAAAAAUAAAACAAAAAAAGUAUAAAAAAUAAAAAAAGUAUAAAAAAA
+CUAUAAAAAACAAAAAAACAAAAAAAAUAGUAGUACUUAGCUUAGCUAAGUACUACAAUAUUAGCAGCUGCUAAUGUCAU
+UAAAGCGCUCAC---------------------------------------------------
+>EU561644 Oropouche virus strain BR/2004/Acre27 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------UUGAAGCUAGAUAC-GGACAAGUGC-UCAAUG
+CUGGUGUUGUUAGAGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCCUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAA---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGAAGC--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083643 Aino virus isolate KH-1/AI/C/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCGAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACCAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCGCAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083639 Aino virus isolate TN-7/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCGAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083623 Aino virus isolate YL-6/AI/M/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+GGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAGUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083618 Aino virus isolate YL-1/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUAGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF676998 Aino virus isolate YL-1/AINO/C/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ610138 Shuni virus isolate SAE7209 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAAA--ACAA
+A---UCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGUUGACCAUGUAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUG
+ACUGCAGAACAAUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUC----------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ610140 Shuni virus isolate SAE3810 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAAA--ACAA
+A---UCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGUUGACCAUGUAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUG
+ACUGCAGAACAAUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUCU----------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083644 Aino virus isolate KH-2/AI/C/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAGAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUCGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGGCUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083633 Aino virus isolate TN-1/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUCUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCCGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083632 Aino virus isolate YL-6/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAGCUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAGGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083622 Aino virus isolate YL-5/AI/M/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCCAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--GCAA
+G---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB568273 Peaton virus N gene for nucleocapsid, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------AUUUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGU
+GCCAGACACUGCCCUCACUCUCCACCGCCUCUCCGGCUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUA
+A---CCAAAUCAAACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGA
+GGGACUCACCAUGUACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUA
+UUGAUAUGCACAGAGUGCUAAAA---------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KY555813 Mermet virus segment S nucleocapsid protein gene, complete cds
+-----------------------------------------------------CGUACUCUAGCAUAGACUACUACUCCA
+CAAUUCAAAAACUUAAAGU------UCUUAAAUAGU------AUGGC------UGAUGCGAUAGUUUUCAACGAUGUACC
+U-CAACGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUA
+UUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCUAC-----U
+GUCAAUCUUACUUUUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUUCCACAGUUC-CAAUCAAAUCCGGU
+UGCAGAUACAGCCCUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGC----UAAUGACUUUUUAC-----UCUC
+AGAGCCCAGUCAACCAGGCUGCUGUCCGUGAGGCCGUAGUU-AUUCCUUUAGCAGAAGUGAAAGGAUGCUCAUGGGAUGA
+UGGACCAGCACUCUACUUGGGGUUUGCCUCAGGAGCUGAAAUGUUCCUGCAA-ACA--UUUACUUUUUUCCCAUUAGUGA
+UCGAGAUGCAUCGUGUGCUCAAAGACGGGAUGGAUGUCAACUUCAUGCGGAAGGUUCUCCGCCAGCGCUAUGGCGCAUUG
+ACUGCUGAACAAUGGAUGAGACAGGAGCUGGUUGCAA-UUCGUGCAGCAUUUGAAGCUGUCGGGGCACUCCCGUGGGCA-
+AGAACUGGAUUCUCUCCAGCUGCAAGAGAA-UUCUUGGCUCAAUUUGGUAUCCGUAUAUAAUUAUCCCAUAGUAAUCAUA
+AACAAUAAAAUAAAAUAUAUAAAAUAAACAAAAAAAGUAUAAAAUAAAAUAAAACACAAAAAAACUAUAAAAAACAAAAA
+AAC-----------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF697158 Utive virus isolate Pan An 48878 nucleocapsid protein gene, complete cds
+------------------------------------------------------------------AGUAGUGUACUCCG
+CAAUUUCAAAAUAAAAAAG------AAUUUAUAAAA------AUGGC---------AGAAUUUGUAUUCAAUGAUGUCCC
+C-CAGAGGUCUACAUCAACAUUUGACCCAGAGGUGGCCUAUGCUACUUUUGAAGC--AGCAUUUCGCCAGACUCUAAAUG
+UCAAUGUUGUUAGAGUGUUCUUUUUAAACCAAAAGAAUGCUAAAAAU-GUUUUGAGAAAAACCUCAAGACCAAA-----U
+GUGGAUUUGACAUUUGGGGG-----UGCAACCUUUCCAAUUGUCAACAACCAUUUUCCUCAAUUU-CAAUCAAAUCCAGU
+CCCUGAUAAUGGGCUCACUCUUCAUAGACUGUCAGGCUAUUUGGCCAGAUGGUC---UAUGGACCAAAUGCGAA---CCA
+A---UCCAAUUCGUCAAGCUGAAUUUAGGGCUGCUGUAGUGG-UCCCUCUUGCUGAAAUUAAGGGGUGCACUUGGAACGA
+UGGUGAUGCUAUGUACCUAGCCUUUGCUGCAGGAGCUGAAAUGUUUUU--AA-ACACCUUUACUUUCUUCCCGCUGGUUA
+UUGAGAUGCACAGGGUCCUCAAGGAUGGCAUGGAUGUCAAUUUCAUGAGAAAAGUACUAAGACAAAGAUAUGGGACAAAA
+ACAGCCGAACAAUGGAUGAAGGAUGAAAUUAUCCCAA-UUAAGGCGGCCUUUGAAGCUGUUGGUAUGCUGAGCUGGGCU-
+AGAACUGGAUUCUCUCCUGCUGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUCAAUGUCUAAAAGAGACA--UUACAAAUU
+AAAAUAAAAUAUAAAAAAUACAAAAAAAUAAUAAAAAUAUAAAAAUACAAAAAAAGCACCUUAGGGUGCAAAAGAUUAGC
+UGCUUAAGGGUUGGGUGGUUGGGGACUUAACAAAUCAGCUCAUUGUAUUUAUUUUGAAAUUGGGAGCACACUACU-----
+---------------------------------------------------------------
+>KC525996 Shuni virus strain SAE1511 nucleocapsid gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAAA--ACAA
+A---UCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGUUGACCAUGUAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUG
+ACUGCAGAACAAUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCA----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>JQ726397 Shuni virus isolate MVA4310 nucleoprotein-like gene, partial sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAAA--ACAA
+A---UCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGUUGACCAUGUAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUGUCCUCUGGUCA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUG
+ACUGCAGAACAAUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGAUCU-----------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ610143 Shuni virus isolate SAE10910 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAAA--ACAA
+A---UCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGUUGACCAUGUAUUUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUG
+ACUGCAGAACAAUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUCU----------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HQ610141 Shuni virus isolate SAE3910 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAAA--ACAA
+A---UCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGUUGACCAUGUAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCA
+UUGAUGUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUG
+ACUGCAGAACAAUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUCU----------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083626 Aino virus isolate CY-1/AI/C/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAA
+A---CCAGAUUAAACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGCGAAAGGUUGCACCUGGACUGA
+AGGACUGACUAUGUAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGAUUA
+UUGACAUGCACAGAGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGUCAGCGCUAUGGUACAUUG
+ACUGCAGAACAGUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG100826 Oropouche like virus isolate A12 nucleocapsid gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-UGGUGUUGCUAGAGUCUUCUUCUCCCACCAAAAGAUGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----G
+GUUGACCUUACUUUUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAG------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>JQ726398 Shuni virus isolate MVA3510 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUAUAGAUC-AAUGCAAA--ACAA
+A---UCAAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGUUGACCAUGUAUCUGGGAUCCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--CUCGAAUUCUAUCCUCUGGUCA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUG
+ACUGCAGAACAAUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUCU----------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>NC_043593 Mermet virus isolate AV 782 nucleocapsid protein gene, complete cds
+-------------------------------------------------------------------------UCUUCCA
+CAAUUCAAAAACUUAAAGU------UCUUAAAUAGU------AUGGC------UGAUGCGAUAGUUUUCAACGAUGUACC
+U-CAACGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUA
+UUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCUAC-----U
+GUCAAUCUUACUUUUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUUCCACAGUUC-CAAUCAAAUCCGGU
+UGCAGAUACAGCCCUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGC----UAAUGACUUUCUAC-----UCUC
+AGAGCCCAGUCAACCAGGCUGCUGUUCGUGAGGCUGUAGUU-AUUCCUUUAGCAGAAGUGAAAGGAUGCUCAUGGGAUGA
+UGGACCAGCACUCUACUUGGGGUUUGCCUCAGGAGCUGAAAUGUUCCUGCAA-ACA--UUCACUUUUUUCCCAUUAGUAA
+UUGAGAUGCACCGUGUGCUCAAAGACGGGAUGGAUGUCAACUUCAUGCGGAAGGUUCUCCGCCAGCGCUAUGGCGCAUUG
+ACUGCUGAACAAUGGAUGAGACAGGAGCUGGUUGCAA-UUCGUGCAGCAUUUGAAGCUGUCGGAGCACUCCCAUGGGCA-
+AGAACUGGAUUCUCUCCAGCUGCAAGAGAA-UUCUUGGCUCAAUUUGGUAUCCGCAUAAAUUAUCCCAUAAUAAUCAUAA
+ACAGUGAAAUAAAAUAUAUAAAAUAAACAAAAAAAGUAUAAAAAUAAAAUAAAACACAAAAAAACUAUAAAAAAACAAAA
+AAACAAAAAAAUAGUAGUACUUAGCUUAGCUAAGUACUACAACAUUAGCAGCUGCUAAAGUUAUUAUAUCGCCUUGAUCA
+GUCUAUAUUAAUUGCUUUAUAUUCAUCUUUGAAUUG---------------------------
+>KF697152 Mermet virus isolate AV 782 nucleocapsid protein gene, complete cds
+-------------------------------------------------------------------------UCUUCCA
+CAAUUCAAAAACUUAAAGU------UCUUAAAUAGU------AUGGC------UGAUGCGAUAGUUUUCAACGAUGUACC
+U-CAACGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUA
+UUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCUAC-----U
+GUCAAUCUUACUUUUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUUCCACAGUUC-CAAUCAAAUCCGGU
+UGCAGAUACAGCCCUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGC----UAAUGACUUUCUAC-----UCUC
+AGAGCCCAGUCAACCAGGCUGCUGUUCGUGAGGCUGUAGUU-AUUCCUUUAGCAGAAGUGAAAGGAUGCUCAUGGGAUGA
+UGGACCAGCACUCUACUUGGGGUUUGCCUCAGGAGCUGAAAUGUUCCUGCAA-ACA--UUCACUUUUUUCCCAUUAGUAA
+UUGAGAUGCACCGUGUGCUCAAAGACGGGAUGGAUGUCAACUUCAUGCGGAAGGUUCUCCGCCAGCGCUAUGGCGCAUUG
+ACUGCUGAACAAUGGAUGAGACAGGAGCUGGUUGCAA-UUCGUGCAGCAUUUGAAGCUGUCGGAGCACUCCCAUGGGCA-
+AGAACUGGAUUCUCUCCAGCUGCAAGAGAA-UUCUUGGCUCAAUUUGGUAUCCGCAUAAAUUAUCCCAUAAUAAUCAUAA
+ACAGUGAAAUAAAAUAUAUAAAAUAAACAAAAAAAGUAUAAAAAUAAAAUAAAACACAAAAAAACUAUAAAAAAACAAAA
+AAACAAAAAAAUAGUAGUACUUAGCUUAGCUAAGUACUACAACAUUAGCAGCUGCUAAAGUUAUUAUAUCGCCUUGAUCA
+GUCUAUAUUAAUUGCUUUAUAUUCAUCUUUGAAUUG---------------------------
+>JQ726395 Shuni virus isolate MVA1110 nucleoprotein-like gene, partial sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAA------A
+------AAAUCAAAUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGA
+GGGGUUGACCAUGUAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUG
+ACUGCAGAACAAUGGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUCU----------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AF362399 Mermet virus strain AV-782 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGGC------UGAUGCGAUAGUUUUCAACGAUGUACC
+U-CAACGGGCUCAAUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUA
+UUAACACCGCUCGAAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCUAC-----U
+GUCAAUCUUACUUUUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUUCCACAGUUC-CAAUCAAAUCCGGU
+UGCAGAUACAGCCCUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGCUAAUGACU-------UUCUACUCUCAA
+A--GCCCAGUCAACCAGGCUGCUGUUCGUGAGGCUGUAGUU-AUUCCUUUAGCAGAAGUGAAAGGAUGCUCAUGGGAUGA
+UGGACCACCAUUCUACUUGGGGUUUGCCUCAGGAGCUGAAAUGUUCCUGCAA-ACA--UUCACUUUUUUCCCAUUAGUAA
+UUGAGAUGCACCGUGUGCUCAAAGACGGGAUGGAUGUAAACUUCAUGCGGAAGGUUCUCCGCCAGCGCUAUGGCGCAUUG
+ACUGCUGAACAAUGGAUGAGACAGGAGCUGGUUGCAA-UUCGGGCAGCAUUUGAAGCUGUCGGAGCACUCCCAUGGGCA-
+AAAACUGGAUUCUUUUCAGCUGCAAGAGAA-UUCUUGGCUCAAUUUGGUAUCCGCAUAUAA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083684 Peaton virus isolate YL-1/PEA/C/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUA
+A---CCAAAUCAAACUGGCUGAGGCCACGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGA
+GGGACUCACCAUGUACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUA
+ACUGCAGAGCAGUGGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083682 Peaton virus isolate YL-1/PEA/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACCA
+A---CCAAAUCAAACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGA
+GGGACUCACCAUGUACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUA
+ACUGCAGAGCAGUGGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083653 Akabane virus isolate YL-3/AKA/M/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083652 Akabane virus isolate YL-2/AKA/C/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083651 Akabane virus isolate YL-1/AKA/M/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083649 Akabane virus isolate KH-1/AKA/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAAUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083648 Akabane virus isolate YL-1/AKA/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF676988 Akabane virus isolate YL-2/AKA/C/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF676987 Akabane virus isolate YL-1/AKA/C/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083655 Akabane virus isolate TN-2/AKA/M/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACGACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083654 Akabane virus isolate TN-1/AKA/M/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGA
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083650 Akabane virus isolate KH-1/AKA/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCCCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF676994 Akabane virus isolate YL-6/AKA/C/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAGG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF676993 Akabane virus isolate YL-5/AKA/M/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAGG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAGUAUAC-UGCAAAUCCGGU
+GUCAGACACUGCCUUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUA
+A---CCAGAUCAAAUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF083683 Peaton virus isolate YL-2/PEA/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCCAAGUGGG---UUGCGGACC-AGUGCAA--GACUA
+A---CCAAAUCAAACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGA
+GGGACUCACCAUGUACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUA
+UUGAUAUGCACAGAGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUAAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUA
+ACUGCAGAGCAGUGGAUGACUCAAAAAAUAGAGGCUG-UUCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KF676999 Peaton virus isolate YL-1/PEA/C/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------CCAUCGUCUCUCAGGAUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUA
+A---CCAAAUCAAACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGA
+GGGACUCACCAUGUACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACUCUCUAGUUA
+UUGAUAUGCACAGAGUGCUAAGAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUA
+ACUGCAGAGCAGUGGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUCAAUGCUGU--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX944293 Akabane virus strain Urf-F-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGUUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX944292 Akabane virus strain Urf-K-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX944291 Akabane virus strain Urf-I-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX944290 Akabane virus strain Urf-G-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX944289 Akabane virus strain Urf-D-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX944288 Akabane virus strain Urf-A-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----U
+GUCGAUCUUACUUUUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGU
+GUCAGACACUGCCUUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUA
+A---UCAGAUCAAGUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH484338 Thimiri orthobunyavirus strain VRC 66414 segment S, complete sequence
+-------------------------------------------------------------GUAGUAGUAGUGUACUCCA
+CAAUUCAAAAAACUUUAUA------AUUGAACAAAG------AUGUC------AGGUGUGUUUGUAUUCGACGAUGUACC
+U-CAACGGACUACAUCUACAUUUGAUCCGGAGAAAGCAUAUGUGGCAUUUGAAGCUGCACAC-GGACAAGCUC-UCACUG
+UUGACACAGCUCGAGUGUUCUUCCUCAAUCAAAAGCGCGCCAAGGAUCGUC-UCCGUCAGACGUCGCAACCAGU-----U
+GUCGAUCUUACAUUUAACAAGCACGUC-----UUUCGAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCAAACCCGGU
+UGGUGAUGCAGACCUUACCCUGCACCGCCUCUCUGGAUACAUUGCGGUUUGGC---UAGCCCAGCAAGUGGU---GGUAG
+GUGGGGCUGUUAAACUUGCUGAAAUAACCAGCAAGGUCAUA-AUCCCGCUGGCUGAGGUGAAAGGCUGUACCUGGAAUGA
+UGGGGCAGGAAUGUACCUGUCAUUCGCUUCGGGCACAGAGAUGUUUCUGGAG-ACA--UUCACUUUCUACCCGCUGGCCA
+UUGAGAUCCAGCGUGUGCUGAAAGAUGGAAUGGAUGUGACUUACAUGCGGAAAGUGCUCAGGCAGAGAUACGGGAAGAUG
+ACUGCGGAAGAAUGGAUGCGCCAGAAGUU-GCCGGAGAUCACUGCUGCAGUCAAAGCAGUCGAGCAGCUGCCUUGGGCA-
+AGGUCUGGCUUCUCAGCCCAGGCUAGAG-CAUUCCUUGCUCAAUUCAAUAUUAAAAUCUAAUACCUGGCAAAUGCCAAAA
+UAUAUAAACAAAAAAGAUAAAAAUACAAAAAAAUAAUAAAAUAUAUAAAAACAAAAUAAAAAAUAUAAAAUACAAAAAAA
+CCAAAUAAAAAUAUAGUAGCGUAGUACCUAGAUUAGCUAGGUACUACACAAUAACAGCAGCAAAAGGGUUGGGUGGUUGG
+GGACUAUUUCUCUAUUGCGUCUUUGGGUUCAUUUUUGAAUUGGGAGCACAC------------
+>KC986389 Schmallenberg virus isolate TR3 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------------------CAA--GGCUA
+GU-GUCC--UCAAACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGG-----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG100825 Oropouche like virus isolate A4 nucleocapsid gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------GUUGUAGUAGUCCUCCGG---CACGGUAUGGCCAAAGACUG-CCUACGUGAGCAAUGGAUGCGUGA-----A
+CUAGAAGUUGCUGUAAGUGAG---AUCC--AAUUUGCAAUGGUUAAUAACCAAUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAG
+ACUGCCGAGCAAUGGAUGCGUGAAGAGAUAGUUGCUG-UAAGAG------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG640116 Schmallenberg virus strain ALT-6GLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG640115 Schmallenberg virus strain ALT-11GLOK-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG640114 Schmallenberg virus strain ALT-12GLOK-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG640113 Schmallenberg virus strain ALT-2GLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG640112 Schmallenberg virus strain KRK-37VS-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG640111 Schmallenberg virus strain KRK-34VS-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG640110 Schmallenberg virus strain ALT-62GLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MG640109 Schmallenberg virus strain ALT-61GLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH160010 Schmallenberg virus strain 537SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH160009 Schmallenberg virus strain 535SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH160008 Schmallenberg virus strain 534SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH160007 Schmallenberg virus strain 533SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH160006 Schmallenberg virus strain 532SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH160005 Schmallenberg virus strain 529SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH160004 Schmallenberg virus strain 526SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH160003 Schmallenberg virus strain 525SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH160002 Schmallenberg virus strain 522SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX609704 Schmallenberg virus strain HTY-10CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX609703 Schmallenberg virus strain HTY-9CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX609702 Schmallenberg virus strain HTY-8CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX609701 Schmallenberg virus strain HTY-7CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX609700 Schmallenberg virus strain HTY-6CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX609699 Schmallenberg virus strain HTY-2CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX609698 Schmallenberg virus strain HTY-1CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX590715 Schmallenberg virus strain HTY-4CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KX590714 Schmallenberg virus strain HTY-3CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGA
+UGGUUAUACAAUGUAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUA
+UUGAAAUGCAUAGGGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUG
+ACUGCUGAAGAAUGGA----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>AB075611 Oya virus gene for Nucleoprotein, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------GCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----U
+GUUAAUCUUACUUUUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCGAAUCCGGU
+UAACGAUACAGCCCUUACCCUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUGAUGAC--AUUUUAUGC------UCA
+GA-GCCCAGUCAAUCAGGCAGCUGUCCGUGAGGCAGUUAUU-AUUCCUCUGGCUGAAGUGAAGGGUUGUUCAUGGGAUGA
+UGGAGCUGCCCUCUAUCUGGGGUUUGCCGCAGGUGCAGAGAUGUUCUUACAG-ACA--UUCACCUUCUUCCCGCUUG-AA
+UCGAAAUGCACCGGGUUC---AGGA-GGGA-GGA----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734989 Leanyer virus isolate cs0002 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUCUACAGGACCUGACUUUAUCUAUGAUGAUAGACC
+UGCAGCAGUCUCAAGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUG
+CAGAUAAUGUUAGGAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAG
+GUCGACCUUCAAUUUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGU
+UGCAGACAAUGCCAUUACACUACACAGGCUUUCAGGAUAUUUAGCCAAAUGGUGUUUUG--------AUGAAAUCGACCA
+-UGGUCAAAUUGAAGAAGCUGAAGUCAAGUCAAAAGUGGUC-AUACCACUUGCAGAAGCAAAGGGCUGUAAAUGGGGAGA
+UGGUGUUGCUCUCUAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUUGUUA
+UUGAUAUGCAUAGAGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAAAA
+ACAGCCGAUGAUUGGAUGAUCAGUGAAGUGGCUGCAAUUCAAAGC-GCUGUGAAAGUGGUUUCCAAAUUACCCUGGGCU-
+AAAGCUGGGUUCACUGCUGCAGCUA-AGAAUUUCUUGGCAAAAUUCAAUAUUUCAGUUUGA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734991 Leanyer virus isolate cs503 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUCUACAGGACCCGACUUUAUCUAUGAUGAUAGACC
+UGCAGCAGUCUCAAGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUG
+CAGAUAAUGUUAGGAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAG
+GUCGACCUUCAAUUUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGU
+UGCAGACAAUGCCAUUACACUACACAGGCUUUCAGGAUAUUUAGCCAAAUGGUGUUUUG--------AUGAAAUUGACCA
+-UGGUCAAAUUGAAGAAGCUGAAGUCAAGUCAAAGGUGGUC-AUACCACUUGCAGAAGCAAAGGGCUGCAAAUGGGGAGA
+UGGCGUUGCUCUCUAUUUGGCAUUUGCACCAGGUGCAGAAAUGUUCCUGAAAGAC---UUUGAAUUCUAUCCUCUUGCAA
+UUGACAUUCAACGUGUUGUAAAAGAUGGGAUGGACAUAACAUUCAUGAGGAAAGUCCUUAAGCAGAGAUAUGGUACAAAA
+ACAGCUGAUGAUUGGAUGAUCAGUGAAGUGACUGCAAUUCAAAGC-GCUGUGAAAGUGGUUGCCAAAUUGCCCUGGGCC-
+AAAGCUGGGUUCACUGCUGCAGCUA-AGAAUUUCUUGGCAAAAUUCAAUAUUUCAGUUUGA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>NC_043562 Leanyer virus isolate AusN16701 segment S, complete sequence
+---------------------------------------------AGUAGUGUGCUCCACGUCAAACGUAGUGCACUCCA
+UAAUCAAACAAUCUAUUG-------AAUUUACA--A-------UGUCUACAGGACCCGACUUUAUCUAUGAUGAUAGACC
+UGCAGCAGUCUCAAGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUG
+CAGAUAAUGUUAGGAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAG
+GUCGACCUUCAAUUUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGU
+UGCAGACAAUGCCAUUACACUACACAGGCUUUCAGGAUAUUUAGCCAAAUGGUGUUUUG--------AUGAAAUUGACCA
+-UGGUCAAAUUGAAGAAGCUGAAGUCAAGUCAAAGGUGGUC-AUACCACUUGCAGAAGCAAAGGGCUGCAAAUGGGGAGA
+UGGCGUUGCUCUCUAUUUGGCAUUUGCACCAGGUGCAGAAAUGUUCCUGAAAGAC---UUUGAAUUCUAUCCUCUUGCAA
+UUGACAUUCAACGUGUUGUAAAAGAUGGGAUGGACAUAACAUUCAUGAGGAAAGUCCUUAAGCAGAGAUAUGGUACAAAA
+ACAGCUGAUGAUUGGAUGAUCAGUGAAGUGACUGCAAUUCAAAGC-GCUGUGAAAGUGGUUGCCAAAUUGCCCUGGGCC-
+AAAGCUGGGUUCACUGCUGCAGCUA-AGAAUUUCUUGGCAAAAUUCAAUAUUU-CAGUUUGAGGAGUGCAUUUUCCUUCU
+UGGUAGUUUUAGUUGAAUAAAAUUUAUAAAAACACAAAAAAAAGUAUAAAACAUCAAAAAAUAUAUAAAAAAAGACCUUC
+GGGUCACCAACAUCUGCCUGACUAAUGAUAUAUAAUUACCUUGAUUUAACGUUUGACGUGGAGCACACUACU--------
+---------------------------------------------------------------
+>HM627177 Leanyer virus isolate AusN16701 segment S, complete sequence
+---------------------------------------------AGUAGUGUGCUCCACGUCAAACGUAGUGCACUCCA
+UAAUCAAACAAUCUAUUG-------AAUUUACA--A-------UGUCUACAGGACCCGACUUUAUCUAUGAUGAUAGACC
+UGCAGCAGUCUCAAGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUG
+CAGAUAAUGUUAGGAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAG
+GUCGACCUUCAAUUUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGU
+UGCAGACAAUGCCAUUACACUACACAGGCUUUCAGGAUAUUUAGCCAAAUGGUGUUUUG--------AUGAAAUUGACCA
+-UGGUCAAAUUGAAGAAGCUGAAGUCAAGUCAAAGGUGGUC-AUACCACUUGCAGAAGCAAAGGGCUGCAAAUGGGGAGA
+UGGCGUUGCUCUCUAUUUGGCAUUUGCACCAGGUGCAGAAAUGUUCCUGAAAGAC---UUUGAAUUCUAUCCUCUUGCAA
+UUGACAUUCAACGUGUUGUAAAAGAUGGGAUGGACAUAACAUUCAUGAGGAAAGUCCUUAAGCAGAGAUAUGGUACAAAA
+ACAGCUGAUGAUUGGAUGAUCAGUGAAGUGACUGCAAUUCAAAGC-GCUGUGAAAGUGGUUGCCAAAUUGCCCUGGGCC-
+AAAGCUGGGUUCACUGCUGCAGCUA-AGAAUUUCUUGGCAAAAUUCAAUAUUU-CAGUUUGAGGAGUGCAUUUUCCUUCU
+UGGUAGUUUUAGUUGAAUAAAAUUUAUAAAAACACAAAAAAAAGUAUAAAACAUCAAAAAAUAUAUAAAAAAAGACCUUC
+GGGUCACCAACAUCUGCCUGACUAAUGAUAUAUAAUUACCUUGAUUUAACGUUUGACGUGGAGCACACUACU--------
+---------------------------------------------------------------
+>KP310501 Oropouche virus strain OROV/MT_CbaAR1256/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------UGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUC--------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM107842 Oropouche virus isolate AMLq16 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------GUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUU---------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM107841 Oropouche virus isolate AMLq14 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------GUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCACGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUC--------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP310500 Oropouche virus strain OROV/MT_CbaAR1229/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------GG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCA-------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>HM107840 Oropouche virus isolate AMLq13 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------GUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGG-----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH734990 Leanyer virus isolate cs0010 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+------------------------------------------AUGUCUACAGGACCUGACUUUAUCUAUGAUGAUAGACC
+UGCAGCAGUCUCAAGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUG
+CAGAUAAUGUUAGGAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAG
+GUCGACCUUCAAUUUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGU
+UGCAGACAAUGCCAUUACACUACACAGGCUUUCAGGAUAUUUAGCCAAAUGGUGCUUUG--------AUGAAAUCGACCA
+-UGGUCAAAUUGAAGAAGCUGAAGUCAAGUCAAAAGUGGUC-AUACCACUUGCAGAAGCAAAGGGCUGUAAAUGGGGAGA
+UGGUGUUGCUCUCUAUUUAGCAUUUGCACCAGGUGCAGAGAUGUUCCUGAAAGAC---UUUGAAUUCUACCCGCUUGCAA
+UUGACAUUCAGCGUGUUGUGAAAGAUGGAAUGGACAUAACAUUUAUGAGGAAAGUCCUUAAGCAGAGAUAUGGCACAAAA
+ACAGCCGAUGAUUGGAUGAUCAGUGAAGUGGCUGCAAUUCAAAGC-GCUGUGAAAGUGGUUUCCAAAUUACCCUGGGCU-
+AAAGCUGGGUUCACUGCUGCAGCUA-AGAAUUUCUUGGCAAAAUUCAAUAUUUCAGUUUGA-------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MF155931 Oropouche virus isolate BA/BR/UFBA/LabViro/01 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------CAAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGUUCA-------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH337271 Oropouche virus strain OROV_BR/MT_CbaH_1251/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------UUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGU--UCAA----------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH337272 Oropouche virus strain OROV_BR/MT_CbaH_1248/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------AUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGU--UCAA----------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH337269 Oropouche virus strain OROV_BR/MT_VGH_1303/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------UUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGU----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH337268 Oropouche virus strain OROV_BR/MT_CbaH_1292/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------AUGAUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACACAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGU--UCAA----------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH337267 Oropouche virus strain OROV_BR/MT_CbaH_1293/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------AUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGU--UCAA----------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH331012 Oropouche virus strain OROV_BR/MT_CbaH_1256/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGCAUAGGGU----------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP347671 Oropouche virus isolate OROV/MT_CbaH282/2012 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------GG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUGGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCACAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAUAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUG-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>MH337270 Oropouche virus strain OROV_BR/MT_CbaH_1279/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAGGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UAAAAAUGCAUAGGGU--UCAA----------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP310506 Oropouche virus strain OROV/MT_CbaAR632/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAUAGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUGGAAUCCAGU
+GCCGGACAACGGUAUUACCCUGCACCGUGUGUCAGGAUACUUAGCGCGAUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGAAUAGGGU--UCAA----------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP347673 Oropouche virus isolate OROV/MT_NMH470/2012 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAUGAAUAGG------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP310504 Oropouche virus strain OROV/MT_CbaAR549/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUG-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP310502 Oropouche virus strain OROV/MT_CbaAR1458/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGG---
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
+>KP310507 Oropouche virus strain OROV/MT_CbaAR833/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------GUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGU
+GCCGGACAACGGUCUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA
+-----CCAAUUAAGCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGA
+UGGUGACGCAAUGUACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGA
+UUGAGAAAAAUAGGGUU---------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------
diff --git a/ThDy/sequences/Virus/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu - serogroup -S.713.sequence alignment.fasta b/ThDy/sequences/Virus/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu - serogroup -S.713.sequence alignment.fasta
new file mode 100644
index 0000000..7545206
--- /dev/null
+++ b/ThDy/sequences/Virus/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu - serogroup -S.713.sequence alignment.fasta	
@@ -0,0 +1,12834 @@
+>HE795110 Simbu virus N and NSs genes, segment S, genomic RNA, isolate SA Ar 53
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------------------------------------------CUCCACU
+AUUAACUAUAU-----UAUUAA-------AUGGC------AAACCAAUUCAUUUUUGAGGAUGUACCU-CAACGGAACUU
+AUCUACAUUUAGUCCGGAGGCAGGGUAUGUGGCAUUUAUUGGUCGGUAU-GGGCAACAAC-UUAACUUCAGUGUUGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAA-----UGUUGAUCUUACUU
+UUGGAGGGG---UCA--AAUUUACACUGGUUAAUAACAAUUUUCCCCAAUAC-ACAGCUAAUCCGGUGCCAGACAAUGCC
+CUCACCCUCCACAGGCUCUCUGGAUAUCUAGCUAGAUGGAC---AGCAGAGCAAGUUAA---GAACAAU---CAAGUGAA
+ACUUGCUGAAGCUACUGCUGCAAUUGUU-AUGCCUCUGGCUGAAGUCAAAGGAUGCACCUGGAAUGAUGGCUAUACCAUG
+UAUCUUGGAUUUGCACCAGGAGCGGAAAUGUUUCUAGAG-ACA--UUUGAAUUUUUCCCUCUUGUCAUCGAUAUGCAUAG
+AGUUUUAAAAGAUGGCAUGGAUGUAAACUUUAUGCGGAAAGCUCUUCGCCAGAGGUAUGGGCUGCUUACUGCAGAACAAU
+GGAUGACUCAAAAGAUUGUUGAAG-UCAAAGCAGCAUUCGAUGCAGUUGGGCAAAUAGCUUGGGCU-AAAUCUGGCUUCU
+CCCCUGCUGCUAGAG-CCUUCCUGCAGCAGUUUGGUAUCACUGUGUAAACUUUCCAAAAAAUCU--UAUCAUCCUCUCAU
+UUUCAUCCUUUCACUUCCUAGUACAACAUGUCUAUGUGUUGUACGCCAUUUCAGCAGCUUGUAUCUUCAUUAUCUGUAUA
+GUUAAUUAGUGGAGCACACUACUG--------------------------------------------------------
+--------------------------------------------------
+>AF362397 Simbu virus strain SA Ar53 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACUAUUAACUAUAU
+UAUUAA----------A-------------UGGC------AAACCAAUUCAUUUUUGAGGAUGUACCU-CAACGGAACUU
+AUCUACAUUUAGUCCGGAGGCAGGGUAUGUGGCAUUUAUUGGUCGGUAU-GGGCAACAAC-UUAACUUCAGUGUUGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAA-----UGUUGAUCUUACUU
+UUGGAGGGG---UCA--AAUUUACACUGGUUAAUAACAAUUUUCCCCAAUAC-ACAGCUAAUCCGGUGCCAGACAAUGCC
+CUCACCCUCCACAGGCUCUCUGGAUAUCUAGCUAGAUGGAC---AGCAGAGCAAGUUAA---GAACAAU---CAAGUGAA
+ACUUGCUGAAGCUACUGCUGCAAUUGUU-AUGCCUCUGGCUGAAGUCAAAGGAUGCACCUGGAAUGAUGGCUAUACCAUG
+UAUCUUGGAUUUGCACCAGGAGCGGAAAUGUUUCUAGAG-ACA--UUUGAAUUUUUCCCUCUUGUCAUCGAUAUGCAUAG
+AGUUUUAAAAGAUGGCAUGGAUGUAAACUUUAUGCGGAAAGCUCUUCGCCAGAGGUAUGGGCUGCUUACUGCAGAACAAU
+GGAUGACUCAAAAGAUUGUUGAAG-UCAAAGCAGCAUUCGAUGCAGUUGGGCAAAUAGCUUGGGCU-AAAUCUGGCUUCU
+CCCCUGCUGCUAGAG-CCUUCCUGCAGCAGUUUGGUUUCACUGGGUAA---CUUUCCAAAAAAUCUUAUCAUCCUCUCAU
+UUUCAUCCUUUCACUUCCUAGUACAACAUGUCUAUGUGUUGUACGCCAUUUCAGCAGCUUGUAUCUUCAUUAUCUGUAUA
+GUUAAAUAGUGGAGUACACUAC----------------------------------------------------------
+--------------------------------------------------
+>MH999475 Simbu orthobunyavirus strain Ar53#2BHK_02:02:96 nucleocapsid protein gene, partial cds; and NSs gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------AUUUUUGAGGAUGUACCU-CAACGGAACUU
+AUCUACAUUUAGUCCGGAGGCAGGGUAUGUGGCAUUUAUUGGUCGGUAU-GGGCAACAAC-UUAACUUCAGUGUUGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAA-----UGUUGAUCUUACUU
+UUGGAGGGG---UCA--AAUUUACACUGGUUAAUAACAAUUUUCCCCAAUAC-ACAGCUAAUCCGGUGCCAGACAAUGCC
+CUCACCCUCCACAGGCUCUCUGGAUAUCUAGCUAGAUGGAC---AGCAGAGCAAGUUAA---GAACAAU---CAAGUGAA
+ACUUGCUGAAGCUACUGCUGCAAUUGUU-AUGCCUCUGGCUGAAGUCAAAGGAUGCACCUGGAAUGAUGGCUAUACCAUG
+UAUCUUGGAUUUGCACCAGGAGCGGAAAUGUUUCUAGAG-ACA--UUUGAAUUUUUCCCUCUUGUCAUCGAUAUGCAUAG
+AGUUUUAAAAGAUGGCAUGGAUGUAAACUUUAUGCGGAAAGCUCUUCGCCAGAGGUAUGGGCUGCUUACUGCAGAACAAU
+GGAUGACUCAAAAGAUUGUUGAAG-UCAAAGCAGCAUUCGAUGCAGUUGGGCAAAUAGCUUGGGCU-AAAUCUGGCUUCU
+CCCCUGCUGCUAGAG-CCUUCCUGCAGCAGUUUGGUAUCACUGUGUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB289320 Akabane virus genomic RNA, segment S, complete sequence, strain: Okayama2004
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACGC
+AUUGCA----------A-------------UGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAAU---CAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAAGCUUAACUGAUCCUCCAGUUUUCU--CUUCUU
+UUUUUCUUUUUUCCUUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAG-CUGCUUGGAUUUUAUUGUUUAUA
+GUUAAUUAGUGGAGAACACUACU---------------------------------------------------------
+--------------------------------------------------
+>AB968527 Akabane virus genomic RNA, segment S, complete sequence, strain: TS-C2
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACGC
+AUUGCA----------A-------------UGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAAU---CAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAGCUUAACUGAUUCUCCAGUUUUUCUUUUUUCU
+CUU------------CCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAG-CUGCUUGGAUUUUAUUGUUUAUA
+GUUAAUUAGUGGAGAACACUACU---------------------------------------------------------
+--------------------------------------------------
+>AB000851 Akabane virus genomic RNA, viral-complementary sequence of S RNA segment, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACGC
+AUUGCA----------A-------------UGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAAU---CAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAGCUUAACUGAUUCUCCAGUUUUUUCUUUUUUC
+UCU-----------UCCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAG-CUGCUUGGAUUUUAUUGUUUAUA
+GUUAAUUAGUGGAGCACACUACU---------------------------------------------------------
+--------------------------------------------------
+>LC217464 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KM-2/B/08
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------UA-----ACUACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAAU---CAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAAGCUUAACUGAUCCUCCAGUUUUCU--CUUCUU
+UUUUUCUUUUUUCCUUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>LC217460 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: OY-1/P/08
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------UA-----AUUACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUCACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAAU---CAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAAGCUUAACUGAUCCUCCAGUUUUCU--CUUCUU
+UUUUUCUUUUUUCCUUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>KR260714 Akabane virus strain JaLAB39 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------AGUGAACUCCACUAUUAACUACGC
+AUUGCA----------A-------------UGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAAU---CAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAUCUUAACUGAUUCUCCAGUUUUCUUUCUUCUC
+UUC---------C----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUUUUAUUGUUUAUAG
+UUAAUUAGUGGAGGACAC--------------------------------------------------------------
+--------------------------------------------------
+>HE795092 Douglas virus N and NSs genes, segment S, genomic RNA, isolate 93-6
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------U-----UCACUACUGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCAGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGGG---UCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUCACACUCCACAGGAUGUCAGGAUACUUAGCGCGGUGGG---UAGCUGACA-CAUGCAA--AGCUAGUGUUC---UCAA
+ACUAGCUGAAGCAAGUGCACAGAUUGUU-AUGCCUCUUGCUGAGGUUAAGGGCUGCACCUGGGCUGAUGGCUAUACAAUG
+UAUCUUGGAUUUGCACCUGGAGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUACCCACUGGUCAUUGAGAUGCAUAG
+AGUCCUCAAAGAUAAUAUGGAUGUGAACUUCAUGAAGAAAGUCCUUCGCCAACGUUACGGCACAAUGACUGCAGAAGAAU
+GGAUGACUCAAAAAAUAACAGAAA-UAAAGGCAGCAUUCAAUUCUGUUGGGCAACUGGCUUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGCAUCAACAUCUAAACCUCUCCGUUAUAACCCUUUACUUUCCGUGC
+AAUAUG----UCUAUGUAUUGCACACCAUUAUACUGCAAAGCUUCUAUUAAAAUAGUUAAUAAGUGGAG-----------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC217466 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KSB-3/P/08
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------UUACGCAUUGCA------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGGG---UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAAU---CAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAAGCUUAACUGAUCCUCCAGUUUUCU--CUUCUU
+UUUUUCUUUUUUCCUUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>LC217459 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: TT-1/E/08
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAAGCUUAACUGAUCCUCCAGUUUUCU--CUUCUU
+UUUUUCUUUUUUCCUUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>LC217469 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: HG-1/P/10
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAAGCUUAACUGAUCCUCCAGUUUUCU--CUUCUU
+UUUUUCUUUUUUUCUUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUUUUAUUGUUUAUAU
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>MH734985 Aino virus isolate cs1574 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUCACACUCCACAGGAUGUCAGGAUACUUAGCGCGGUGGG---UAGCUGACA-CAUGCAAA--GCUAGUGUUC---UCAA
+GCUGGCUGAAGCAAGUGCACAGAUUGUC-AUGCCUCUUGCUGAGGUUAAGGGCUGCACCUGGGCUGAUGGCUAUACAAUG
+UAUCUUGGAUUUGCACCUGGAGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUACCCACUGGUCAUUGAGAUGCAUAG
+AGUCCUCAAAGAUAAUAUGGAUGUGAAUUUCAUGAAGAAAGUCCUUCGCCAGCGUUACGGCACAAUGACUGCAGAAGAAU
+GGAUGACUCAAAAAAUAACAGAAA-UAAAGGCAGCAUUCAAUUCUGUUGGGCAACUGGCUUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGCAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF362393 Douglas virus strain CSIRO 150 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUNCUCCACUAUUAACUACUG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCAGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUCACACUCCACAGGAUGUCAGGAUACUUAGCGCGGUGGG---UAGCUGACA-CAUGCAAA--GCUAGUGUUC---UCAA
+ACUAGCUGAAGCAAGUGCACAGAUUGUU-AUGCCUCUUGCUGAGGUUAAGGGCUGCACCUGGGCUGAUGGCUAUACAAUG
+UAUCUUGGAUUUGCACCUGGAGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUACCCACUGGUCAUUGAGAUGCAUAG
+AGUCCUCAAAGAUAAUAUGGAUGUGAACUUCAUGAAGAAAGUCCUUCGCCAACGUUACGGCACAAUGACUGCAGAAGAAU
+GGAUGACUCAAAAAAUAACAGAAA-UAAAGGCAGCAUUCAAAUUCGUUGGGCAACUGGCUUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGUAAGA-ACUUUCUUGCAGGAAUUCGGUAUCAACAUCUAAACCUCUCCGUUAUAACCCUUUACUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAAGCUUCUANAAAAAUAGUUAAUAUGUGGAGCCACACUACU-
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000819 Tinaroo virus RNA for two overlapping orfs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACGC
+AUUGCA------A-----------------UGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGGUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCC-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAAUCUUAACUGAUUCUCCAGUCUUCUGUCUUCUC
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCAUACCUUUAUUCAGCUGCUUGGAUUUUAUUGUUUAUAG
+UUAAUUAGUGGAGCACACUACU----------------------------------------------------------
+--------------------------------------------------
+>KU375444 Akabane virus strain NM/BS/1 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACUC
+AUUGCA------A-----------------UGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGACGGGAUGGAUGUCAACUUCAUGAGGAAAGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUACAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGUUUUCUUACUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCGGAUUUUAUUGUUUAUAG
+UUAAUUAGUGGAGCACACUACU----------------------------------------------------------
+--------------------------------------------------
+>MH734987 Douglas virus isolate cs400 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUCACACUCCACAGGAUGUCAGGAUACUUAGCGCGGUGGG---UAGCUGACA-CAUGCAAA--GCUAGUGUUC---UCAA
+GCUGGCUGAAGCAAGUGCACAGAUUGUC-AUGCCUCUUGCUGAGGUUAAGGGCUGCACCUGGGCUGAUGGCUAUACAAUG
+UAUCUUGGAUUUGCACCUGGAGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUACCCACUGGUCAUUGAGAUGCAUAG
+AGUCCUCAAAGACAAUAUGGAUGUGAAUUUCAUGAAGAAAGUCCUUCGCCAGCGUUACGGCACAAUGACUGCAGAAGAAU
+GGAUGACUCAAAAAAUAACAGAAA-UAAAGGCAGCAUUCAAUUCUGUUGGGCAACUGGCUUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGCAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734984 Aino virus isolate cs1068 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAAA---CCAGAUAAA
+AUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGAAGGACUAACUAUG
+UAUUUAGGUUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUAUUGAUAUGCAUAG
+AGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUGACUGCAGAGCAAU
+GGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB289319 Akabane virus genomic RNA, segment S, complete sequence, strain: Okayama2001
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACGC
+AUUGCA------A-----------------UGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCAGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAAAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGACCUAAUCUUUGCUGAUUCUCCAGUUUCCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUAGUGGAGAACACUACU----------------------------------------------------------
+--------------------------------------------------
+>AB232240 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-3F97
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232228 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KS-94P97
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734988 Douglas virus isolate cs1059 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCAGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUGCAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUCACACUCCACAGGAUGUCAGGAUACUUAGCGCGGUGGG---UAGCUGACA-CAUGCAAA--GCUAGUGUUC---UCAA
+GCUAGCUGAAGCAAGUGCACAGAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGAAGGACUAACUAUG
+UAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUAUUGAUAUGCAUAG
+AGUACUAAAAGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUGACUGCAGAAGAAU
+GGAUGACUCAAAAAAUAACAGAAA-UAAAGGCAGCAUUCAAUUCUGUUGGGCAACUGGCUUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGCAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH484350 Yaba-7 virus strain Yaba 7 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------GUAGUAGUGAACUCCACUAUUAACUACUU
+AUUGCA------A-----------------UGGC------AAAUCAAUUUGUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGACACGGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUUUCUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAAGCCAA-GAUGGUCCUACAUAAGACGCCACAACCGAG-----UGUCGAUCUUACAU
+UUGCUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUACAGUGUCAGACACUGCC
+UUUACCCUCCACCGCAUCUCAGGGUAUCUAGCAAGAUGGG---UUGCUGAGC-AAUGCAA--GGGCAA---CCAGAUUAA
+GCUAGCUGAGGCAGCUGCGACUAUUGUU-AUGCCACUGGCUGAGAUCAAGGGCUGCACAUGGAAUGAUGGUUAUACCAUG
+UAUCUGGGUUUCGCUCCUGGGGCAGAAAUGUUCCUAGAG-ACC--UUUGAGUUCUACCCACUUGUCAUAGACAUGCAUCG
+CGUCUUAAAAGACGGAAUGGAUGUGAACUUCAUGAGAAAGGUCUUACGCCAGAGAUAUGGUCAGCUCACAGCGGAAGAAU
+GGAUGACAACUAAGGUUGAUGCAG-UGAAGGCAGCAUUUGGAUCUGUUGCCCAGAUAUCUUGGGCC-AAAUCCGGAUUCU
+CCCCUGCAGCACGUG-CUUUCCUUACUCAGUUUGGCAUCCAGAUCUAGGCACCUCUUCCAGUCUUUUCCUAAUUUUCCCU
+CUUAGUGUACCAUGUCUAUGUGGUACACGCCAUUUCAGCAGUAUUGAUUCUUCAUUCAUAGUUAAUUAGUGGAGAACACU
+AC------------------------------------------------------------------------------
+--------------------------------------------------
+>MH484341 Tinaroo virus strain CSIRO 153 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------GUAGUAGUGAACUCCACUAUUAACUACGC
+AUUGCA------A-----------------UGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGGUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCC-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAAUCUUAACUGAUUCUCCAGUCUUCUGUCUUCUC
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCAUACCUUUAUUCAGCUGCUUGGAUUUUAUUGUUUAUAG
+UUAAUUAGUGGAGAACA---------------------------------------------------------------
+--------------------------------------------------
+>AB000854 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---CCAGAUCAA
+ACUUGCUGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGAUGGGUAUGCAAUG
+UAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGGUGAAGGAUGGAAUGGAUGUCAACUUUAUGAGGAAAGUGCUACGCCAGAGAUAUGGGCAGUUAACUGCUGAGGAGU
+GGAUGACAUCAAAGUUGGACGCAG-UCAAAGCUGCAUACGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAGUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000853 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GUCCAA---CCAGAUCAA
+ACUUGCUGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGAUGGGUAUGCAAUG
+UAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGGUGAAGGAUGGAAUGGAUGUCAACUUUAUGAGGAAAGUACUACGCCAGAGAUAUGGGCAGUUAACUGCUGAGGAGU
+GGAUGACAUCAAAGUUGGACGCAG-UCAAAGCUGCAUACGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAGUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY284023 Akabane virus strain DHL10M110 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACGC
+AUUGCA------A-----------------UGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAAUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAAAUCAA
+GCUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUCUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGACGGAAUGGAUGUUAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGUUUUUUCUUACUUC
+UAU-----------UUCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCGGAUUUUAUUGUUUAUAG
+UUAAUUAGUGGAGCACACUACU----------------------------------------------------------
+--------------------------------------------------
+>AB232245 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KT-1S98
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCAGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCAUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232196 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: YG-88-2
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000864 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734940 Akabane virus isolate B8935 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GUCCAA---CCAGAUCAA
+ACUUGCUGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGAUGGGUAUGCAAUG
+UAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGGUGAAGGAUGGAAUGGAUGUCAACUUUAUGAGGAAAGUACUACGCCAGAGAUAUGGGCAGUUAACUGCUGAGGAGU
+GGAUGACAUCAAAGUUGGACGCAG-UCAAAGCUGCAUACGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAGUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF362392 Yaba-7 virus strain Y-7 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACUAUUAACUACUU
+AUUGCA------A-----------------UGGC------AAAUCAAUUUGUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGACACGGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUUUCUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAAGCCAA-GAUGGUCCUACAUAAGACGCCACAACCGAG-----UGUCGAUCUUACAU
+UUGCUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUACAGUGUCAGACACUGCC
+UUUACCCUCCACCGCAUCUCAGGGUAUCUAGCAAGAUGGG---UUGCUGAGC-AAUGCAA--GGGCAA---CCAGAUUAA
+GCUAGCUGAGGCAGCUGCGACUAUUGUU-AUGCCACUGGCUGAGAUCAAGGGCUGCACAUGGAAUGAUGGUUAUACCAUG
+UAUCUGGGUUUCGCUCCUGGGGCAGAAAUGUUCCUAGAG-ACC--UUUGAGUUCUACCCACUUGUCAUAGACAUGCAUCG
+CGUCUUAAAAGACGGAAUGGAUGUGAACUUCAUGAGAAAGGUCUUACGCCAGAGAUAUGGUCAGCUCACAGCGGAAGAAU
+GGAUGACAACUAAGGUUGAUGCAG-UGAAAGCAGCAUUUGGAUCUGUUGCCCAGAUAUCUUGGGCC-AAAUCCGGAUUCU
+CCCCUGCAGCACGUG-CUUUCCUUACUCAGUUUGGCAUCCAGAUCUAGGCACCUCUUCCAGUCUUUUCCUAAUUUUCCCU
+CUUAGUGUACCAUGUCUAUGUGAUACACGCCAUUUCAGCAGUAUUGAUUAUUCAUUCAUAGUUAAAUAGUGGAGUACACU
+ACU-----------------------------------------------------------------------------
+--------------------------------------------------
+>AB289321 Akabane virus genomic RNA, segment S, complete sequence, strain: Iriki
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACGC
+AUUGCA------A-----------------UGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGACAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGUUUCCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUUUUAUUGUUUAUAG
+UUAAUUAGUGGAGAACACUACU----------------------------------------------------------
+--------------------------------------------------
+>LC217486 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KSB-2/P/13
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUCACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAAA--GCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGACGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGUUUUCUUACUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>LC217483 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KM-1/B/13
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUCACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAAA--GCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGACGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGUUUUCUUACUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>AB232211 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-3E91
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAAUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUAAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232209 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1E91
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAAUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000867 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAAGCCAA-GAUGGUCUUACAUAAGACGUCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734959 Akabane virus isolate R7949 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---AUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GUCCAA---CCAGAUCAA
+ACUUGCUGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGAUGGGUAUGCAAUG
+UAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGGUGAAGGAUGGAAUGGAUGUCAACUUUAUGAGGAAAGUACUACGCCAGAGAUAUGGGCAGUUAACUGCUGAGGAGU
+GGAUGACAUCAAAGUUGGACGCAG-UCAAAGCUGCAUACGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAGUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734993 Peaton virus isolate cs322 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAU-GGGCACCAGC-UCAACUUCGAUGUUGCUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCGGGAUAUCUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAGAUAAA
+ACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGCUGUACCUGGACUGAAGGCUAUACUAUG
+UAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUAUUGAUAUGCAUAG
+AGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUGACUGCAGAGCAAU
+GGAUGACAUCAAAGUUGGACGCAG-UCAAAGCUGCAUACGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAGUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF034942 Akabane virus strain Obe-1 nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAGCUUAACUGAUUCUCCAGUUUUUUCUUUUUUC
+UCU-----------UCCUAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUUUUAUUGUUUAUA-
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF034939 Akabane virus strain Jagar-39 nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------UACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAUCUUAACUGAUUCUCCAGUUUUCUUUCUUCUC
+UUC--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUUUUAUUGUUUAUA-
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232218 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-2E94
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGAUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUUAUCGACAUGCAUCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAACUGACUGCAGAAGAGU
+GGAUGACAUCUAAGCUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232214 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-1C94
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUCAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734947 Akabane virus isolate CS710 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACGUUUAAUCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGUACUUGGAGUGAUGGGUAUGCAAUG
+UAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734941 Akabane virus isolate CS0016 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+ACUUGCUGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGAUGGGUAUGCAAUG
+UAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGAUAUGGGCAGUUAACUGCUGAGGAGU
+GGAUGACAUCAAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC217468 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: ON-1/E/10
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUGCAAUCGUC-AUGCCGCUGGCUGAAGUGAAAGGCUGCACAUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGUUUCCUUGAUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>AB232223 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-5E95
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGUCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGAUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUUAUCGACAUGCAUCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAACUGACUGCAGAAGAGU
+GGAUGACAUCUAAGCUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAAUCUGGCUUCU
+CGCCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232222 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-4P95
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGUCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGAUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUCUACCCACUGGUUAUCGACAUGCAUCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAACUGACUGCAGAAGAGU
+GGAUGACAUCUAAGCUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC217458 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: YG-1/Br/07
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUCCUGGAA-ACC--UUUGAAUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUAACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGAUGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGUUUCCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>LC217470 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: ON-5/E/10
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUGCAAUCGUC-AUGCCGCUGGCUGAAGUGAAAGGCUGCACAUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGUUUCCUUGAUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>KX384864 Schmallenberg virus strain SBV-Hun3 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------CUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUUGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCU----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP731867 Schmallenberg virus isolate D495/12-1 segment S nucleocapsid protein (N) and nonstructural protein (N) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------CUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGGCAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGGAGAACACUACU--
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC139379 Schmallenberg virus strain Na2 isolate Na2-CNS N protein and Nss protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGGAGAACACUACU--
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HE795104 Sathuperi virus N and NSs genes, segment S, genomic RNA
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------CUGACAUAUUUCAGUAGUUAAUAGUGGAAUACACUACUG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUCACACUUCACAGGAUGUCGGGAUAUCUAGCGCGAUGGG---UUGCUGACA-CAUGCAA--GGCUAGU-GUCC--UUAA
+GUUGGCUGAAGCAAGUGCUCAGAUUGUC-AUGCCUCUUGCUGAAGUUAAAGGUUGCACUUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUCGCACCUGGGGCAGAAAUGUUCCUUGAU-GCU--UUUGACUUCUACCCACUGGUUAUCGAGAUGCACAG
+GGUUCUCAAAGAUAAUAUGGAUGUAAAUUUCAUGAAAAAAGUCCUUCGCCAGCGCUACGGAACAAUGACUGCAGAAGAAU
+GGAUGACUCAAAAAAUAACAGAAA-UUAAGGCUGCGUUCAACUCCGUUGGACAACUUGCUUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCCAGA-ACUUUCUUGCAGCAAUUUGGUAUCAACAUCUAAACCUCUCCAUUACAAACUCUUAAAUUUCCGUG
+CAAUAUGUCU---AUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUGAGAUAGUUAAUAAGUGGAG-----------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF362403 Sathuperi virus strain I-11155 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUCACACUUCACAGGAUGUCGGGAUAUCUAGCGCGAUGGG---UUGCUGACA-CAUGCAA--GGCUAGU-GUCC--UUAA
+GUUGGCUGAAGCAAGUGCUCAGAUUGUC-AUGCCUCUUGCUGAAGUUAAAGGUUGCACUUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUCGCACCUGGGGCAGAAAUGUUCCUUGAU-GCU--UUUGACUUCUACCCACUGGUUAUCGAGAUGCACAG
+GGUUCUCAAAGAUAAUAUGGAUGUAAAUUUCAUGAAAAAAGUCCUUCGCCAGCGCUACGGAACAAUGACUGCAGAAGAAU
+GGAUGACUCAAAAAAUAACAGAAA-UUAAGGCUGCGUUCAACUCCGUUGGACAACUUGCUUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCCAGA-ACUUUCUUGCAGCAAUUUGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000858 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAGCUUA---------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB373234 Akabane virus S segment N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: KS-1/P/06
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCAUUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGUUUUCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>AB000855 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000852 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY381272 Akabane virus strain GXLCH02 segment S nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------UGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGGUCAA
+ACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UAUCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGACGGGAUGGAUGUCAACUUCAUGCGGAAAGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGUUUUCUUACUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCG-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB698468 Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: OI-3/P/07, segment S
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------UAACUACUGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUCACACUUCACAGGAUGUCGGGAUAUCUAGCACGAUGGG---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UUAA
+GUUGGCUGAAGCAAGUGCUCAGAUUGUC-AUGCCUCUUGCUGAAGUUAAAGGUUGCACUUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCAGGGGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUAUCCGCUGGUUAUUGAAAUGCACAG
+GGUUCUCAAAGACAAUAUGGAUGUAAAUUUCAUGAAAAAAGUCCUUCGCCAGCGCUAUGGAACAAUGACUGCAGAAGAAU
+GGAUGACUCAAAAAAUAACAGAAA-UUAAGGCUGCAUUCAACUCUGUUGGACAGCUUGCUUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCCAGAG-CUUUCUUGCAGCAAUUCGGUAUUAACAUCUAAACCUCUCCGUUACAUACUCUUUAAUUUCCGUG
+CAAUAUGUCU---AUGUAUUGCACACCAUCAUACUGCAAGGCUUCUGUUGAAAUAGUUAAUAA-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB698467 Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: ON-1/P/06, segment S
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------UAACUACUGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUCACACUUCACAGGAUGUCGGGAUAUCUAGCACGAUGGG---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UUAA
+GUUGGCUGAAGCAAGUGCUCAGAUUGUC-AUGCCUCUUGCUGAAGUUAAAGGUUGCACUUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCAGGGGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUAUCCGCUGGUUAUCGAAAUGCACAG
+GGUUCUCAAAGACAAUAUGGAUGUAAAUUUCAUGAAAAAAGUCCUUCGCCAGCGCUAUGGAACAAUGACCGCAGAAGAAU
+GGAUGACUCAAAAAAUAACAGAAA-UUAAGGCUGCAUUCAACUCUGUUGGACAGCUUGCUUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCCAGAG-CUUUCUUGCAGCAAUUCGGUAUUAACAUCUAAACCUCUCCGUUACAUACUCUUUAAUUUCCGUG
+CAAUAUGUCU---AUGUAUUGCACACCAUCAUACUGCAAGGCUUCUGUUGAAAUAGUUAAUAA-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>NC_043582 Schmallenberg virus isolate F6 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGGAGAACACUACU--
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH999470 Akabane orthobunyavirus strain Akabane#2Vero#3BHK_22:05:98 nucleocapsid protein gene, partial cds; and NSs gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------UUUCACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGCAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GUCCAA---CCAGAUCAA
+ACUUGCUGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGAUGGGUAUGCAAUG
+UAUUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAAUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGGUGAAGGAUGGAAUGGAUGUCAACUUUAUGAGGAAAGUACUACGCCAGAGAUAUGGGCAGUUAACUGCUGAGGAGU
+GGAUGACAUCAAAGUUGGACGCAG-UCAAAGCUGCAUACGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAGUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX384870 Schmallenberg virus strain SBV-Hun5 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------CUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCU----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX384867 Schmallenberg virus strain SBV-Hun4 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------CUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCU----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX384858 Schmallenberg virus strain SBV-Hun1 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------CUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUAC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCU----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC355456 Schmallenberg virus isolate HL1 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCAGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAGACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGGAGAACACUACU--
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>JX853181 Schmallenberg virus isolate Germany segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGGAGAACACUACU--
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HE649914 Schmallenberg virus genes for nucleocapsid protein and non-structural protein, segment S, genomic RNA, isolate BH80/11-4
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------CUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGGAGAACACUACU--
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC217480 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: EH-3/Br/11
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAANUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCAUCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCCUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAACUUUGCUGAUCCUCCAGUUUCCUUGCUUCUA
+UCU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>LC217478 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: EH-1/P/11
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------UUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCAUCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCCUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAACUUUGCUGAUCCUCCAGUUUCCUUGCUUCUA
+UCU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>LC217474 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: HS-1/Br/11
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAAUUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCAUCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCCUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAACUUUGCUGAUCCUCCAGUUUCCUUGCUUCUA
+UCU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>LC217472 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: OY-2/B/11
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCAUCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCCUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAACUUUGCUGAUCCUCCAGUUUCCUUGCUUCUA
+UCU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>MH734966 Akabane virus isolate CS241 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734960 Akabane virus isolate CS215 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCAUUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HE795107 Shamonda virus N and NSs genes, segment S, genomic RNA, isolate Ib An 5550
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAA-UCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGCUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGUACCUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUAUCCGCUAGUUAUCGAAAUGCAUAG
+GGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGGAGAACACUACUGC
+CCAGGCAUAGUUCACCAUCUUUCGGGUCCUAACGCAUGCGCUCGUGCUCCACCUCCCCGACGCGGUCGGGUCGUAGUACG
+GGCCGGU-------------------------------------------
+>AB426280 Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KSB-3/P/06
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAAUUUUACCCAUUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGUUUCCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>AB426271 Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KM-1/Br/06
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAAGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCAUUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGUUUCCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>DQ973189 Akabane virus strain K-9 nucleocapsid protein (N) and nonstructural protein (NS) mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUCCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000857 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAAAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUUCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB698469 Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: KSB-2/C/08, segment S
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------UAACUACUGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCAGUGUUGCUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUCACACUUCACAGGAUGUCGGGAUAUCUAGCACGAUGGG---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UUAA
+GUUGGCUGAAGCAAGUGCUCAGAUUGUC-AUGCCUCUUGCUGAAGUUAAAGGUUGCACUUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCAGGGGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUAUCCGCUAGUUAUCGAAAUGCACAG
+GGUUCUCAAAGACAAUAUGGAUGUAAAUUUCAUGAAAAAAGUCCUUCGCCAGCGCUAUGGAACAAUGACCGCAGAAGAAU
+GGAUGACUCAAAAAAUAACAGAAA-UUAAGGCUGCAUUCAACUCUGUUGGACAGCUUGCUUGGGCU-AAAUCUGGAUUCU
+CACCUGCCGCCAGAG-CUUUCUUGCAGCAAUUCGGUAUUAACAUCUAAACCUCUCCGUUACAUACUCUUUAAUUUCCGUG
+CAAUAUGUCU---AUGUAUUGCACACCAUCAUACUGCAAGGCUUCUGUUGAAAUAGUUAAUAA-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB334168 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: ON-2/B/88
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---UCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB125371 Sathuperi virus N, NSs genes for nucleocapsid, non-structural protein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------UAACUACUGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUCACACUUCAUAGGAUGUCGGGAUAUCUAGCACGAUGGG---UUGCUGAUA-CGUGCAA--GGCUAGU-GUCC--UUAA
+GUUGGCUGAAGCAAGUGCUCAGAUUGUC-AUGCCUCUUGCUGAGGUUAAAGGUUGUACUUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUCGCACCAGGGGCAGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUACCCGCUGGUUAUCGAAAUGCACAG
+GGUUCUCAAAGACAAUAUGGAUGUAAAUUUCAUGAAAAAAGUCCUUCGCCAGCGCUAUGGAACAAUGACUGCAGAAGAAU
+GGAUGACUCAAAAAAUAACAGAAA-UUAAGGCUGCGUUCAACUCUGUUGGACAGCUUGCUUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCCAGAG-CUUUCUUGCAGCAAUUUGGUAUUAACAUCUAAACCUCUCCGUUACACACUCUUAAAUUUCCGUG
+CAAUAUGUCU---AUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUGAAAUAGUUAAUAA-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309149 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 838/Cumbria/2017
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCUGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX384876 Schmallenberg virus strain SBV-Hun7 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------CUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUCGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCU----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX384861 Schmallenberg virus strain SBV-Hun2 segment S nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------CUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAGCAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCU----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795141 Schmallenberg virus isolate W13-4-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGGACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC139376 Schmallenberg virus strain Na1 isolate Na1-CNS N protein and Nss protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGAACUCCACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGCGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGGAGAACACUACU--
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP731865 Schmallenberg virus isolate BH619/12 segment S nucleocapsid protein (N) and nonstructural protein (N) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------CACUAUUAACUACAG
+AAAU--------A-----------------UGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAAGUGGAGAACACUA----
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY048678 Peaton virus strain CSIRO110 nucleoprotein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAU-GGGCCCCAGC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCGGGAUAUCUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAGAUAAA
+ACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGCUGACUAUG
+UAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUAUCGACAUGCAUAG
+AGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUGCUCCGCCAACGUUAUGGUACAUUAACUGCAGAGCAAU
+GGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAAACUUCUAAAAAAACCCCACUCCCUCCCUAGUA
+UGGUGUU-----CCACAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUUUAUUGAUUGUUCUAU---------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734996 Tinaroo virus isolate cs153 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGGUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCC-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734969 Akabane virus isolate CS661 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734968 Akabane virus isolate CS506 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734967 Akabane virus isolate CS502 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734965 Akabane virus isolate CS236 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCAGGUGCUGAGAUGUUCCUUGAG-ACC--UUUGAGUUCUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734964 Akabane virus isolate CS235 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCAGGUGCUGAGAUGUUCCUUGAG-ACC--UUUGAGUUCUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734963 Akabane virus isolate CS233 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734962 Akabane virus isolate CS231 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734961 Akabane virus isolate CS228 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGGUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCC-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734957 Akabane virus isolate CS1798 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGGAUGCAAUG
+UACUUGGGAUUUGCCCCAGGGGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCAUUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734954 Akabane virus isolate CS1776 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUAUAGACAUGCACCG
+UGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCCUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734952 Akabane virus isolate CS1416 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCAUUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734946 Akabane virus isolate CS700 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCAUUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB373232 Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KS-2/Mo/06
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCAUUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGUUUCCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>AF034940 Akabane virus strain PT-17 nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------UACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGUUUCCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUUUUAUUGUUUAUA-
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH484278 Aino virus strain JaNAr 28 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------GUAGUGUACUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AGUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGUAAA--ACGAA---UCAGAUUAA
+AUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUGGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGGCUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUUUUAGAA-ACA--UUUGAAUUCUACCCUUUGGUUAUUGAUAUGCACAG
+AGUGCUGAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUUCGCCAGCGCUACGGCACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCUAGAG-CCUUCCUUGCCCAAUUUGGCAUAAACAUCUAAAUUCCUGUAAAACCCCA-----CCCCUUCCCC
+CAGUAUGGUGUUCCAAAACACCAUACGCCAUUCCUGCAGCAUUGUUUAUUUCUUUCUAUUGAUUGUUCUAUGUGGAGCAC
+A-------------------------------------------------------------------------------
+--------------------------------------------------
+>HE795089 Aino virus N and NSs genes, segment S, genomic RNA, isolate 38K
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------CUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AGUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGUAAA--ACGAA---UCAGAUUAA
+AUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUGGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGGCUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUUUUAGAA-ACA--UUUGAAUUCUACCCUUUGGUUAUUGAUAUGCACAG
+AGUGCUGAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUUCGCCAGCGCUACGGCACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCUAGAG-CCUUCCUUGCCCAAUUUGGCAUAAACAUCUAAAUUCCUGUAAAACCCCA-----CCCCUUCCCC
+CAGUAUGGUGUUCCAAAACACCAUACGCCAUUCCUGCAGCAUUGUUUAUUUCUUUCUAUUGAUUGUUCUAUGUGGAGCAC
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>FJ498795 Akabane virus isolate AK7 nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCGGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGU-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGCUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCGCUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB426272 Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KM-2/Br/06
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAAGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCAUUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGUUUCCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUU---
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>DQ973188 Akabane virus strain KV0505 nucleocapsid protein (N) and nonstructural protein (NS) mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUCCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUCCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUACCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000862 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000860 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUCGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG731557 Akabane virus isolate HN10169 nucleoprotein mRNA, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGACGGGAUGGAUGUCAACUUCAUGAGGAAAGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUCCAAAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY381273 Akabane virus strain GXLCH04 segment S nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------UGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUACUACAAUUGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGGUUCGCUCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGACGGGAUGGAUGUUAACUUCAUGAGGAAAGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCCAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGUUUUCUUACUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCG-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB334177 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: YG-3/P/98
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---UCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAGGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGUUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAACUAAGUUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB334164 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: MZ-1/P/88
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---UCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734953 Akabane virus isolate CS1711 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UAUUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278878 Akabane virus isolate YL-2/AKA/C/15/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY828205 Schmallenberg virus isolate PL_13_130-6_ovis nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309156 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 138/IsleofWight/2012
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAGAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309147 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 2179/Lancashire/2017
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309165 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1892/Oxfordshire/2012
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGAUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGGUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+AGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309161 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 901/Dorset/2012
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAUAUCC---UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAGAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795145 Schmallenberg virus isolate S12-1 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGUAA--GGCUAGU-GUCC--UUAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795135 Schmallenberg virus isolate W12-13 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309162 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1833/Devon/2012
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232319 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: CY-77
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232313 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-2E03
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUAACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY383717 Akabane virus nucleocapsid protein (N) mRNA, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734978 Akabane virus isolate DPP261 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGUACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCAGGUGCUGAGAUGUUCCUUGAG-ACC--UUUGAGUUCUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734977 Akabane virus isolate DPP240 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGUACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCAGGUGCUGAGAUGUUCCUUGAG-ACC--UUUGAGUUCUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734975 Akabane virus isolate DPP232 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGUACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCAGGUGCUGAGAUGUUCCUUGAG-ACC--UUUGAGUUCUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734955 Akabane virus isolate CS1777 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCUCUGGCUGAGGUGAAGGGCUGCACCUGGAGUGACGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUAUAGACAUGCACCG
+UGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG731558 Akabane virus isolate HN10174 nucleoprotein mRNA, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUYAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGCUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGACGGGAUGGAUGUCAACUUCAUGAGGAAAGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC217482 Akabane virus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: ON-1/P/12
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCGGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGUUUCCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>AB426273 Akabane virus S segment N, NSs genes for nucleocapsid, non-stractural protein, complete cds, strain: KM-3/Ce/06
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGCGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCAUUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGUUUCCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCAUGGAUUUUAUUGUUUAUAG
+UUAAUUA-------------------------------------------------------------------------
+--------------------------------------------------
+>LC309145 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9594/Yorkshire/2017
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUARU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>FJ498797 Akabane virus isolate 93FMX nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACACCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGUUGAGGUGAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AINSRNA Aino virus S protein and N protein RNA
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AUUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AGUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGUAAA--ACGAA---UCAGAUUAA
+AUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUGGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGGCUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUUUUAGAA-ACA--UUUGAAUUCUACCCUUUGGUUAUUGAUAUGCACAG
+AGUGCUGAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUUCGCCAGCGCUACGGCACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCUAGAG-CCUUCCUUGCCCAAUUUGGCAUAAACAUCUAAAUUCCUGUAAAACCCCA-----CCCCUUCCCC
+CAGUAUGGUGUUCCAAAACACCAUACGCCAUUCCUGCAGCAUUGUUUAUUUCUUUCUAUUGAUUGUUCUAUGUGGAGCCA
+CACUACU-------------------------------------------------------------------------
+--------------------------------------------------
+>MH734981 Aino virus isolate cs296 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---UCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734958 Akabane virus isolate DPP231 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGAUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCUCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734950 Akabane virus isolate CS951 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGAUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCUCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY385908 Akabane virus strain GXLCH01 segment S nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------UGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAC-ACUGCAAACCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCUACAAUCGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGGUUCGCUCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGACGGGAUGGAUGUUAACUUCAUGAGGAAAGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGUUUUCUUACCUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCG-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY381274 Akabane virus strain GXLCH16-70 segment S nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------UGCAAUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUUUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCUGAAGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACUUAGGGUUCGCUCCUGGUGCCGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGACGGGAUGGAUGUUAACUUCAUGAGGAAAGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAAUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAAUCUCUGCUGAUUCUCCAGUUUUCUUACUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUCG-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB334180 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: SG-2/E/02
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---UCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCCGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAACUAAGUUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB334178 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: KS-1/P/98
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---UCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUAUCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAACUAAGUUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB334176 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: KSB-3/P/95
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---UCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB334173 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: HG-1/B/95
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---UCAGAUCAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB334155 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: KSB-2/C/86
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---UCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGUACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF529883 Akabane virus strain NT-14 nucleoprotein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUCCUCCAGUUUCCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCA-------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734971 Akabane virus isolate C1316 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH999471 Shamonda orthobunyavirus strain Shamonda#1Vero_21:01:94 nucleocapsid protein and NSs genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGCUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGUACCUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUAUCCGCUAGUUAUCGAAAUGCAUAG
+GGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278882 Akabane virus isolate KH-1/AKA/C/13/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUAAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278880 Akabane virus isolate 08H65-2 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUAAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278877 Akabane virus isolate 93H78 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY828206 Schmallenberg virus isolate PL_12_1018-08_bos nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY828203 Schmallenberg virus isolate PL_12_36_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY828196 Schmallenberg virus isolate PL_12_25_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309158 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 174/Kent/2012
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGAUAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309153 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 777/Norfolk/2012
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUGCAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309151 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9363/Shropshire/2017
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGAUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309142 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1449/Norfolk/2017
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGCCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309141 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 5082/Shropshire/2017
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCCGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795142 Schmallenberg virus isolate W12-3 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGGACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGAAUC-UUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795140 Schmallenberg virus isolate S11-2 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCACUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGCCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCGACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795111 Schmallenberg virus isolate W12-10-2/3 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108874 Schmallenberg virus isolate BH248/12-1 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108872 Schmallenberg virus isolate BH237/12-4 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108870 Schmallenberg virus isolate BH233/12-1 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAGGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUACCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108864 Schmallenberg virus isolate BH199/12-5 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCGCAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108860 Schmallenberg virus isolate BH197/12-3 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGAAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGCUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108856 Schmallenberg virus isolate BH148/12-9 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+AGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUUU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>JQ308773 Akabane virus isolate AKAV-32/SKR/2010 nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCGGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>JQ308772 Akabane virus isolate AKAV-17/SKR/2010 nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232310 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-8B01
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCCGAAGUGAAGGGCUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGUCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232305 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KSB-33C01
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCCGAAGUGAAGGGCUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUCAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGUCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232260 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1E98
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUCAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CGCCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232176 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: YG-1E85
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAC-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGUAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF362404 Shamonda virus strain An5550 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAAGGUGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGGGUUGCUAA
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGGACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGCUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAAAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGUACCUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGAUUUUUAUCCGCUAGUUAUCGAAAUGCAUAG
+GGUCCUUAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUACCAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAACUUGCCUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUUGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309148 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 8095/NEWales/2017
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUYCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUARU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000868 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------UAACUACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---AUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCCGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGGUAUGGGCAGUUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAAGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAAGCUUA---------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734976 Akabane virus isolate DPP237 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACGUUUAACCCGGAUGCAGGGUAUGUGGCUUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GCUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGUACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCAGGUGCUGAGAUGUUCCUUGAG-ACC--UUUGAGUUCUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAAGCUGCAUUUGGAUCAGUUGCCCAGAUAUCUUGGUCU-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAAAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>NC_043549 Peaton virus N and NSs genes, segment S, genomic RNA, isolate CSIRO 110
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAAUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCGGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAGAUAAA
+ACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGCUGACUAUG
+UAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUAUCGACAUGCAUAG
+AGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUACUCCGCCAACGUUAUGGUACAUUAACUGCAGAGCAAU
+GGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGACAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAAACUUCUAAAAAACCCCACUCCCU------CCC
+UAGUAUGGUGUUCCACAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUUUAUUGAUUGUUCUAUGUGGAGCAC
+ACUACUAGC-----------------------------------------------------------------------
+--------------------------------------------------
+>LC309152 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9877/PowysWales/2017
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUMAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HE795095 Peaton virus N and NSs genes, segment S, genomic RNA, isolate CSIRO 110
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAAUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCGGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAGAUAAA
+ACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGCUGACUAUG
+UAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUAUCGACAUGCAUAG
+AGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUACUCCGCCAACGUUAUGGUACAUUAACUGCAGAGCAAU
+GGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGACAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAAACUUCUAAAAAACCCCACUCCCU------CCC
+UAGUAUGGUGUUCCACAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUUUAUUGAUUGUUCUAUGUGGAGCAC
+ACUACUAGC-----------------------------------------------------------------------
+--------------------------------------------------
+>AB232320 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: MP496
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUGUUUUCAAUGAUGUUCCA-CAACGGAAUGC
+AGCUACGUUUAACCCGGAUAUAGGGUAUGUGGCAUUUAUUGCUAAAUAU-GGGCAACAUC-UCAACUUCAGUGUUGCUAG
+AGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACAU
+UUGGAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-ACUGCAAAUACAGUGUCAGACACUGCC
+CUUACCUUGCAUCGUAUCUCAGGAUACUUAGCUAGAUGGG---UUGCUGAGC-AAUGCAAAGGG--AA---UCAGCUAAA
+GAUUGCAGAGGCAGCUGCAGUCAUUGUA-AUGCCCUUGGCUGAGAUUAAAGGAUGCACAUGGAAUGAUGGAUACACCAUG
+UAUCUUGGCUUUGCACCUGGGGCAGAGAUGUUUCUUGAG-ACC--UUUGAAUUCUAUCCACUAGUAAUUGAUAUGCAUCG
+UGUACUCAAAGACGGAAUGGAUGUAAACUUUAUGAGGAAAGUCUUGCGCCAGAGAUAUGGCCAAUUAACAGCAGAACAAU
+GGAUGACUUCCAAGAUCGAUGAAG-UAAAGGCUGCAUUUGGAUCUGUCGCUCAGAUAUCCUGGGCC-AAAUCUGGUUUCU
+CACCUGCAGCUCGCG-CUUUCCUCACUCAAUUUGGAAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232213 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1P93
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCCGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUAGUUAUCGACAUGCACCG
+UGUAAUAAAGGACGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734972 Akabane virus isolate CS1383 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUAGGAUUUGCCCCAGGUGCUGAAAUGUUCCUCGAG-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAAGAAGGUCCUACGCCAGAGAUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734949 Akabane virus isolate CS749 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAA-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGAUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734948 Akabane virus isolate CS744 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACGGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUAGGAUUUGCUCCAGGUGCUGAAAUGUUCCUCGAA-ACA--UUUGAGUUCUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGAGAUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB334174 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: HG-2/B/95
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUUCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---UCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGCACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGUUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278881 Akabane virus isolate 08H65-1 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUAAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUAGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278879 Akabane virus isolate Tainan/17H8 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY828204 Schmallenberg virus isolate PL_13_130-11_ovis nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUACCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY828202 Schmallenberg virus isolate PL_12_38_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUCGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY828200 Schmallenberg virus isolate PL_15_711_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCGACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY828199 Schmallenberg virus isolate PL_14_962_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUACGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY828198 Schmallenberg virus isolate PL_13_356-2_ovis nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY828197 Schmallenberg virus isolate PL_12_27_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAGUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH484320 Peaton virus strain CSIRO 110 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------------------UAGUAGUAGUGUAUUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAAUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCGGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAGAUAAA
+ACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGCUGACUAUG
+UAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUAUCGACAUGCAUAG
+AGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUACUCCGCCAACGUUAUGGUACAUUAACUGCAGAGCAAU
+GGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGACAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAAACUUCUAAAAAAACCCCACUCCCUCCCUAGUA
+UGGUGUU-----CCACAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUUUAUUGAUUGUUCUAUGUGGAGCAC
+ACUACUAGGGAG--------------------------------------------------------------------
+--------------------------------------------------
+>LC309155 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 239/Devon/2012
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUAGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309150 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1309/Lancashire/2017
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCAUAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309144 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 9321/Lancashire/2017
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUCACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309143 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 7754/Cornwall/2017
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309166 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 1916/Dorset/2012
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCCAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309160 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 242/Warickshire/2012
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAUGUCUU-AAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309159 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 182/EastSussex/2012
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCUAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCAUAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795159 Schmallenberg virus isolate W12-9-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAUGCC---UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795158 Schmallenberg virus isolate W12-7 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795156 Schmallenberg virus isolate W12-16-2/3 nucleocapsid protein and truncated nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUAAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795154 Schmallenberg virus isolate W12-4 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCAG--AUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795153 Schmallenberg virus isolate W12-10-3/3 nucleocapsid protein and truncated nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUAGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795151 Schmallenberg virus isolate W12-17-2/2 nucleocapsid protein and truncated nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGAUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795149 Schmallenberg virus isolate W12-12-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795147 Schmallenberg virus isolate W12-10-1/3 nucleocapsid protein and truncated nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAUGUCUU-AAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795124 Schmallenberg virus isolate S12-5-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGCGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108878 Schmallenberg virus isolate BH336/12-1 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108866 Schmallenberg virus isolate BH200/12-2 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACCU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAGAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108854 Schmallenberg virus isolate BH127/12-16 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUUUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUACAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108848 Schmallenberg virus isolate BH37/12-2 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUAAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>JQ308771 Akabane virus isolate AKAV-7/SKR/2010 nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232284 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KM-3B01
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCCGAAGUGAAGGGCUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGUCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232268 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: MZ-1C00
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCCGAAGUGAAGGGCUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGUCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232264 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-5B98
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCCGAAGUGAAGGGCUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232261 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-1P98
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAACCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUAAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACU--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUCAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CGCCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>NC_043554 Sabo virus N and NSs genes, segment S, genomic RNA, isolate IB AN 9398
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------CCACUAUUAACUACGUAUCUCUAUGGC------AAGCCAAUUUAUCUUUGAUGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUCACUGUUGCUCG
+AGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGACCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGUGCCAGACACUGCC
+CUUACACUCCAUAGGAUGUCAGGGUAUCUAGCCAGAUGGG---UUGCUGAGC-UCUGCC---GAGGAAA--CCAAAUUAA
+ACUAGCGGAGGCAGCAACAUUGAUUGUC-AUGCCAUUAGCAGAGGUCAAGGGUUGCACCUGGAACGAUGGGUACACAAUG
+UACCUAGGAUUUGCCCCAGGUGCAGAAAUGUUCUUAGAG-ACA--UUCGAAUUUUACCCGCUUGUUAUUGAUAUGCACAG
+AGUUUUGAAGGAUGGGAUGGAUGUCAACUUCAUGCGGAAAGUACUCCGCCAGCGUUAUGGGACACUGACUGCAGAGGAGU
+GGAUGACAACUAAGAUAGAAGCAG-UCAGGGCUGCAUUCAACUCUGUUGCUCAGAUCUCUUGGGCU-AAGACUGGAUUCU
+CUCCUGCUGCAAGAG-CCUUCCUUGCCAACUUUGGAAUCCAAAUCUAAAAAUAUACCAGUUUCAAAGUUCCCUUUUACCU
+UUCUU---------UUCUUUGUGUAUCAUGUCUAUGUGAUACACGCCAAUUCUGCUGCUUGUGAGAUCUAAGCACAGUGG
+GGCAUUUAUCUUCCCUUGUUGGCAUGGUGAGAAUUUGCAAGUAUAGUUAAUUAGUGGAGAACACUAC-------------
+--------------------------------------------------
+>NC_043698 Shuni virus strain SAE1809 nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---UCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGUUGACCAUG
+UAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUYCUUCGCCAACGCUAUGGGACAUUGACUGCAGAACAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACUUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUCAAAACAAUCCCA---CCCCUUUCCCC
+CAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUCAUCUCUAUUAAUUGUUCUAUGUGGAGCAC
+ACUACU--------------------------------------------------------------------------
+--------------------------------------------------
+>HE795098 Sabo virus N and NSs genes, segment S, genomic RNA, isolate IB AN 9398
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------CCACUAUUAACUACGUAUCUCUAUGGC------AAGCCAAUUUAUCUUUGAUGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUCACUGUUGCUCG
+AGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGACCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGUGCCAGACACUGCC
+CUUACACUCCAUAGGAUGUCAGGGUAUCUAGCCAGAUGGG---UUGCUGAGC-UCUGCC---GAGGAAA--CCAAAUUAA
+ACUAGCGGAGGCAGCAACAUUGAUUGUC-AUGCCAUUAGCAGAGGUCAAGGGUUGCACCUGGAACGAUGGGUACACAAUG
+UACCUAGGAUUUGCCCCAGGUGCAGAAAUGUUCUUAGAG-ACA--UUCGAAUUUUACCCGCUUGUUAUUGAUAUGCACAG
+AGUUUUGAAGGAUGGGAUGGAUGUCAACUUCAUGCGGAAAGUACUCCGCCAGCGUUAUGGGACACUGACUGCAGAGGAGU
+GGAUGACAACUAAGAUAGAAGCAG-UCAGGGCUGCAUUCAACUCUGUUGCUCAGAUCUCUUGGGCU-AAGACUGGAUUCU
+CUCCUGCUGCAAGAG-CCUUCCUUGCCAACUUUGGAAUCCAAAUCUAAAAAUAUACCAGUUUCAAAGUUCCCUUUUACCU
+UUCUU---------UUCUUUGUGUAUCAUGUCUAUGUGAUACACGCCAAUUCUGCUGCUUGUGAGAUCUAAGCACAGUGG
+GGCAUUUAUCUUCCCUUGUUGGCAUGGUGAGAAUUUGCAAGUAUAGUUAAUUAGUGGAGAACACUAC-------------
+--------------------------------------------------
+>AF362396 Sabo virus strain An9398 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACUAUUAACUACGU
+ACCUCU------A-----------------UGGC------AAGCCAAUUUAUCUUUGAUGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUCACUGUUGCUCG
+AGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGACCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGUGCCAGACACUGCC
+CUUACACUCCAUAGGAUGUCAGGGUAUCUAGCCAGAUGGG---UUGCUGAGC-UCUGCC---GAGGAAA--CCAAAUUAA
+ACUAGCGGAGGCAGCAACAUUGAUUGUC-AUGCCAUUAGCAGAGGUCAAGGGUUGCACCUGGAACGAUGGGUACACAAUG
+UACCUAGGAUUUGCCCCAGGUGCAGAAAUGUUCUUAGAG-ACA--UUCGAAUUUUACCCGCUUGUUAUUGAUAUGCACAG
+AGUUUUGAAGGAUGGGAUGGAUGUCAACUUCAUGCGGAAAGUACUCCGCCAGCGUUAUGGGACACUGACUGCAGAGGAGU
+GGAUGACAACUAAGAUAGAAGCAG-UCAGGGCUGCAUUCAACUCUGUUGCUCAGAUCUCUUGGGCU-AAGACUGGAUUCU
+CUCCUGCUGCAAGAG-CCUUCUUUGCCAACUUUGGAAUCCAAAUCUAAA-AAAU------AUACCAGUUUCAAAGUUCCC
+UUUUACCUUUCUUUUUCUUUGUGUAUCAUGUCUAUGUGAGACACGCCAAUUCUGCUGCUUGUGAGAUCUAAGCACAGUGG
+GGCAUUUAUCUUCCCUUGUUGGCAUGGUGAGAAUUUGCAAGUAUAGUUAAAUAGCGGAGUACACUACU------------
+--------------------------------------------------
+>MH734974 Akabane virus isolate CS1796 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUAUAGACAUGCACCG
+UGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734973 Akabane virus isolate CS1586 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUAUAGACAUGCACCG
+UGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734970 Akabane virus isolate CS979 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUAUAGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734956 Akabane virus isolate CS1778 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUAUAGACAUGCACCG
+UGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734951 Akabane virus isolate CS1209 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUAUAGACAUGCACCG
+UGUGAUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734945 Akabane virus isolate CS505 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUAUAGACAUGCACCG
+UGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734944 Akabane virus isolate CS396 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUAUAGACAUGCACCG
+UGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734943 Akabane virus isolate CS294 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUAUAGACAUGCACCG
+UGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734942 Akabane virus isolate CS0221 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUAUUUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAGUUGUG-AUGCCUUUGGCUGAAGUGAAGGGCUGCACUUGGAGUGAUGGGUAUGCAAUG
+UACUUGGGAUUUGCCCCGGGUGCUGAAAUGUUCCUCGAG-ACG--UUUGAGUUCUACCCACUGGUUAUAGACAUGCACCG
+UGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUACGCCAGCGGUAUGGACAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAGAUAUCUUGGGCU-AAGUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCCCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF034941 Akabane virus strain Iriki nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------UACGCAUUGCAAUGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGACAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAAUCUUUGCUGAUUCUCCAGUUUCCUUGCUUCUA
+UUU--------C-----UAAGUGCACCAUGUCUAUGUGGUGCACACCUUUGUUCAGCUGCUUGGAUUUUAUUGUUUAUA-
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000866 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---AUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCCGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGGUAUGGGCAGUUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAAGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000861 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000859 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCCGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGGUAUGGGCAGUUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH999469 Akabane orthobunyavirus strain Cu170#1Vero_21:07:94 nucleocapsid protein and NSs genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAGCCAAUUUAUCUUUGAUGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUCACUGUUGCUCG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGACCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGUGCCAGACACUGCC
+CUUACACUCCAUAGGAUGUCAGGGUAUCUAGCCAGAUGGG---UUGCUGAGC-UCUGCC---GAGGAAA--UCAAAUUAA
+ACUAGCAGAGGCAGCAACAUUGAUUGUC-AUGCCACUGGCAGAGGUCAAGGGUUGCACCUGGAACGAUGGGUACACAAUG
+UACUUAGGAUUUGCCCCAGGUGCAGAAAUGUUCUUAGAG-ACA--UUCGAAUUCUACCCGCUUGUUAUUGACAUGCACAG
+AGUUUUGAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAAGUACUUCGCCAGCGUUAUGGGACUCUGACUGCAGAGGAGU
+GGAUGACAACUAAGAUAGAAGCAG-UCAGGGCUGCAUUCAACUCUGUUGCUCAGAUCUCUUGGGCU-AAGACUGGAUUCU
+CUCCUGCUGCAAGAG-CCUUCCUUGCCAACUUUGGAAUCCAAAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278876 Akabane virus isolate 13H22 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUUGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUAAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278875 Akabane virus isolate 13H35 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUUGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUAAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278870 Akabane virus isolate PT-1/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCCGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278866 Akabane virus isolate YL-1/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY828201 Schmallenberg virus isolate PL_12_28_culic nucleocapsid and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCGACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGGUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP144999 Akabane virus strain DHL10M110 nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAAUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAACCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAAAUCAA
+GCUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGGUUCGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACU--UUUGAGUUCUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGACGGAAUGGAUGUUAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCUUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795160 Schmallenberg virus isolate W12-6 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUCACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795157 Schmallenberg virus isolate S11-3 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-CCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--CUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795150 Schmallenberg virus isolate S12-4 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACAGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUGUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795134 Schmallenberg virus isolate S12-6b-2/2 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGCGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCGCCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795129 Schmallenberg virus isolate S11-1 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGCGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACCGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HE800143 Shuni virus N and NSs genes, segment S, genomic RNA, isolate Ib An 10107
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUAUUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACCCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUGAAAGGUUGUACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACA--UUUGAGUUCUACCCUCUGGUCAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUAUGGGACAUUGACUGCAGAACAGU
+GGAUGACGCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAGUCAGGAUUCU
+CACCAGCUGCUAGA-ACUUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAAUAAUCCCA---CCCCUUUCCCC
+CAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCCGCAGCAUUGUUCAUUUAUCUCUAUUAAUUGUUCUAUGUGGAGCAC
+ACUAC---------------------------------------------------------------------------
+--------------------------------------------------
+>KC108868 Schmallenberg virus isolate BH231/12-1 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUAGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108862 Schmallenberg virus isolate BH198/12-5 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAAGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108852 Schmallenberg virus isolate BH77/12-1 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGA---GUCA--AAUUUACAGUAGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108846 Schmallenberg virus isolate BH28/12-5 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUCAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUACAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KC108842 Schmallenberg virus isolate BH02/12-1 segment S nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUAAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACAGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232291 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: MZ-6C01
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCAGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCGCUGGCCGAAGUGAAGGGCUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGUCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232286 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: KM-7B01
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUACA-GCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUUGUG-AUGCCACUGGCCGAAGUGAAGGGCUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUAUCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGUCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232207 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: ON-3E90
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC309146 Schmallenberg virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain: 184/SWWales/2017
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAWAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGRUUAAUAACCAUUUUYCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACGCUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUARU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGRUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGARAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB000863 Akabane virus RNA for nucleoprotein, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGACAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH484299 Kaikalur virus strain VRC 713423-2 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------AGUAGUAGUGUACUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAAUUUAUUUUUCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAGAUGGG---UUGCAGACC-AGUGCAAA--ACAAA---UCAGAUUAA
+AUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCCGAAGUGAAAGGUUGCACCUGGACCGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCGGGUGCUGAAAUGUUUUUAGAA-ACA--UUCGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAGGACGGGAUGGAUGUCAACUUUAUGAGGAAGGUCCUUCGCCAGCGCUAUGGCACAUUGACUGCAGAGCAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAAAUUCCUAUAAAACCCCA-----CCCCUUUCCC
+CAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUUCUUUCUAUUAAUUGUUCUAUGUGGAGCAC
+A-------------------------------------------------------------------------------
+--------------------------------------------------
+>LC198187 Shamonda orthobunyavirus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KSB-1/C/15
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUAGU-GUCC--UCAA
+GCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUAUCCACUAGUUAUCGAAAUGCAUAG
+GGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGGACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUUAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC198186 Shamonda orthobunyavirus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KS-2/P/15
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUAGU-GUCC--UCAA
+GCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUAUCCACUAGUUAUCGAAAUGCAUAG
+GGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGGACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUUAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>LC198185 Shamonda orthobunyavirus N, NSs genes for nucleocapsid, non structural protein, complete cds, isolate: KS-1/P/15
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUAGU-GUCC--UCAA
+GCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUUGAUUUCUAUCCACUAGUUAUCGAAAUGCAUAG
+GGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGGACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUUAACAUUUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH999468 Akabane orthobunyavirus strain Sabo#2Vero#1BHK_03:08:94 nucleocapsid protein and NSs genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAGCCAAUUUAUCUUUGAUGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGACACGGGGUAUGUGGCGUUUAUCAGUAAGUAU-GGGCAACAUC-UCAACUUCACUGUUGCUCG
+AGUCUUCUUCCUCAACCAAAAAAAGGCCAAA-AUGGUCUUACAUAAGACGGCACAACCAAG-----UGUCGACCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAC-AUUGCAAAUCCUGUGCCAGACACUGCC
+CUUACACUCCAUAGGAUGUCAGGGUAUCUAGCCAGAUGGG---UUGCUGAGC-UCUGCC---GAGGAAA--CCAAAUUAA
+ACUAGCGGAGGCAGCAACAUUGAUUGUC-AUGCCAUUAGCAGAGGUCAAGGGUUGCACCUGGAACGAUGGGUACACAAUG
+UACCUAGGAUUUGCCCCAGGUGCAGAAAUGUUCUUAGAG-ACA--UUCGAAUUUUACCCGCUUGUUAUUGAUAUGCACAG
+AGUUUUGAAGGAUGGGAUGGAUGUCAACUUCAUGCGGAAAGUACUCCGCCAGCGUUAUGGGACACUGACUGCAGAGGAGU
+GGAUGACAACUAAGAUAGAAGCAG-UCAGGGCUGCAUUCAACUCUGUUGCUCAGAUCUCUUGGGCU-AAGACUGGAUUCU
+CUCCUGCUGCAAGAG-CCUUCCUUGCCAACUUUGGAAUCCAAAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278874 Akabane virus isolate YL-1/AKA/M/15/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUAAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCGGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278873 Akabane virus isolate 12H37 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUAAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278872 Akabane virus isolate 13H33 nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUAAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUAAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278869 Akabane virus isolate HL-3/AKA/M/12/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUUAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCCGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGAGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCCGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278868 Akabane virus isolate HL-1/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGUUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCCGA-AUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF278867 Akabane virus isolate YL-2/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCGUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795146 Schmallenberg virus isolate W13-3 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAAUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAGUCCUGUGCCAGACAAUGCC
+AUUAUACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795133 Schmallenberg virus isolate W12-19 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGAUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGCGUUGCUAG
+AGCCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAAU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACCGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB698470 Shamonda virus N, NSs genes for nucleocapsid, non-structural protein, complete cds, strain: ON-3/P/07, segment S
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUAGU-GUCC--UCAA
+GCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUCGAUUUCUAUCCACUAGUUAUCGAAAUGCAUAG
+GGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCAUAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232175 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: Iriki956-5-A
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCCAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUAGGGUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGACAGCUGACUGCAGAGGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB183283 Shamonda virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain:MZ-7/P/02
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUAGU-GUCC--UCAA
+GCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUCGAUUUCUAUCCACUGGUUAUCGAAAUGCAUAG
+GGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUCCGUGCA
+AUAU-----GUCUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB183282 Shamonda virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain:MZ-6/P/02
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUAGU-GUCC--UCAA
+GCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUCGAUUUCUAUCCACUAGUUAUCGAAAUGCAUAG
+GGUCCUUAAGGACAAUAUGGAUGUCAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB183279 Shamonda virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain:MZ-3/P/02
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUAGU-GUCC--UCAA
+GCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUCGAUUUCUAUCCACUGGUUAUCGAAAUGCAUAG
+GGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB183278 Shamonda virus N, NSs genes for nucleocapsid protein, non-structural protein, complete cds, strain:KSB-6/C/02
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------UAACUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAAUUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAAA-AUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCGGGAUAUCUAGCACGCUGGA---UUGCUGACA-CAUGCAA--GGCUAGU-GUCC--UCAA
+GCUAGCCGAAGCUAGUGCUCAGAUUGUC-AUGCCUCUUGCCGAGGUUAAGGGAUGUACCUGGGCUGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCUGAAAUGUUCCUUGAU-GCU--UUCGAUUUCUAUCCACUAGUUAUCGAAAUGCAUAG
+GGUCCUUAAGGACAAUAUGGAUGUGAAUUUUAUGAAAAAAGUUCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAGGCUGCUUUCAAUUCUGUUGGACAGCUUGCCUGGGCU-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACUUUCUUGCAGCAAUUCGGUAUCAACAUCUAAACCUCUUCAUCACAGAUCUUCAAUUUCCGUGC
+AAUAUGU----CUAUGUAUUGCACACCAUUAUACUGCAAGGCUUCUGUUAAGAUAGUUAAUAA-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB244090 Akabane virus gene for nucleocapsid, partial cds, strain: Okayama 2001
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------AAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCAGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAU-ACUGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGCUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAAAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAU-------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB232244 Akabane virus N, NSs genes for nucleoprotein, nonstructural protein, complete cds, clone: CB-2B98
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGCAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---AUUA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCCGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAAGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGGUAUGGGCAGUUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAAGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUUCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734994 Peaton virus isolate cs347 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUCAUUUUUCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUUUCGGGAUAUUUAGCUAAAUGGG---UCGCAGAUC-AAUGCAAA--ACAAA---CCAGAUAAA
+ACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACUUGGACUGAGGGGCUGACUAUG
+UAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUAUCGACAUGCAUAG
+AGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUACUUCGCCAACGUUAUGGUACAUUAACUGCAGAGCAAU
+GGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUAAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734982 Aino virus isolate cs655 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGCUAUGUGGCAUUUAUUGCUAAACAUAGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACCCUCCACCGUCUUUCAGGAUAUCUAGCAAGAUGGG---UUGCAGACC-AGUGCAAA--ACAAA---UCAGAUUAA
+AUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGCACCUGGACUGAAGGAUUGACUAUG
+UAUCUGGGAUUUGCACCGGGUGCUGAAAUGUUUUUAGAA-ACA--UUCGAAUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAGGAUGGAAUGGAUGUCAAUUUUAUGAGGAAGGUCCUUCGCCAGCGCUAUGGCACACUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCCGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT795144 Schmallenberg virus isolate W13-1 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------CUACAGAAAUAUGUC------AAGCCAAUUCAUUUUUGAAGAUGUACCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGGUAAGUAU-GGGCAACAAC-UCAACUUCGGUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCCUACAUAAGACGGCACAACCAAG-----UGUCGAUCUUACUU
+UUGGUGGG---GUCA--AAUUUACAGUGGUUAAUAGCCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUUUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUGGU-GUCC--UCAA
+AUUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCC-AAAUCUGGAUUCU
+CUCCUGCUGCUAGA-ACCUUCUUGCAGCAAUUCGGUAUCAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB334154 Aino virus N, NSs genes for nucleocapsid, nonstructural protein, complete cds, strain: B7974
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUUGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAAA---CCAGAUAAA
+AUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUAAAAGGCUGUACCUGGACUGAAGGACUGACUAUG
+UAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUAUUGAUAUGCAUAG
+AGUACUAAAAGAUGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUGACUGCAGAGCAAU
+GGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734986 Aino virus isolate cs378 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUCAUUUUUCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAAA---CCAGAUAAA
+AUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGAAGGACUAACUAUG
+UAUUUAGGUUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUAUUGAUAUGCAUAG
+AGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUGACUGCAGAGCAAU
+GGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734983 Aino virus isolate cs990 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUCAUUUUUCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAAA---CCAGAUAAA
+AUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGAAGGACUAACUAUG
+UAUUUAGGUUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUAUUGAUAUGCAUAG
+AGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUGACUGCAGAGCAAU
+GGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734980 Aino virus isolate cs276 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUCAUUUUUCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAAA---CCAGAUAAA
+AUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGAAGGACUAACUAUG
+UAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUAUUGAUAUGCAUAG
+AGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUGACUGCAGAGCAAU
+GGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734979 Aino virus isolate B7974 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUCAUUUUUCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACAA-CAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAAA---CCAGAUAAA
+AUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGAAGGACUAACUAUG
+UAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUAUUGAUAUGCAUAG
+AGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUGACUGCAGAGCAAU
+GGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY378155 Akabane virus strain ISR-01 nucleoprotein (NP) and non-structural protein (NSsP) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAACCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAC-ACUGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUCGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGCUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUGCGCCAGAGGUACGGGCAGCUGACUGCAGAGGAGU
+GGAUGACAUCUAAGUUGGAUGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGUUUCU
+CACCUGCAGCAAGAG-CUUUCCUGGCUCAAUUUGGUAUCCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH999473 Shuni orthobunyavirus strain Shuni#2BHK#2Vero_22:05:98 nucleocapsid protein and NSs genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACCCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAGGGGUUGACCAUG
+UACCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACA--UUUGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUAUGGGACAUUGACUGCAGAACAGU
+GGAUGACGCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAGUCAGGAUUCU
+CACCAGCUGCCAGA-ACUUUCCUUGCCCAAUUCGGUAUAAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KU133231 Akabane virus isolate Adana-15 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------GC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAACAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGAUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUGACUGCAGAGGAGU
+GGAUGACAUCUAAGUUGGAUGCAG-UUAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCAAGAG-CUUUCCUGGCUCAAUUCGGU--------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>JQ308774 Akabane virus isolate AKAV-35/SKR/2010 nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUCAUUUUCAAUGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAUUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGUUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCUACAAUCGUA-AUGCCGCUGGCUGAAGUGAAGGGAUGUACCUGGAGUGAUGGGUAUGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGCCUUACGCCAGACAUAUGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCUUGGGCC-ACAUCUCGCUUCU
+CACCUGCCGCUAGGG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF362394 Kaikalur virus strain VRC713423-2 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AACCCAUUUUAUUUUUCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAGAUGGG---UUGCAGACC-AGUGCAAA--ACAAA---UCAGAUUAA
+AUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCCGAAGUGAAAGGUUGCACCUGGACCGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCGGGUGCUGAAAUGUUUUUAGAA-ACA--UUCGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAGGACGGGAUGGAUGUCAACUUUAUGAGGAAGGUCCUUCGCCAGCGCUAUGGCACAUUGACUGCAGAGCAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCCAGAG-CCUUCCUUGCCCAAUUCGGCAUAAACAUUUAAAUUCCUAUAAAACCCCA-----CCCCUUUCCC
+CAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUUCUUUCUAUUAAUUGUUCUAUGUGGAGCCA
+CACUACU-------------------------------------------------------------------------
+--------------------------------------------------
+>MF278871 Akabane virus isolate YL-3/AKA/C/12/TW nulecoprotein (NP) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAAUCAAUUUAUUUUCAACGAUGUUCCA-CAACGGAAUGC
+AGCUACAUUUAAUCCGAAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAGCAGC-UCAACUUUACUGUUGCUGG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCCGCUGGCUGAAGUAAAGGGCUGCACCUGGAGUGAUGGGUACGCAAUG
+UACCUAGGCUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUUGACAUGCACCG
+UGUAAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAAAGAUACGGGCAGCUGACUGCAGAAGAAU
+GGAUGACAUCUAAGUUAGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCCUGGGCC-AAAUCUGGCUUCU
+CACCUGCAGCUAGAG-CUUUCCUGGCUCAAUUUGGUAUUCAGAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734992 Peaton virus isolate cs245 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCGGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAGAUAAA
+ACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGCUGACUAUG
+UAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUAUCGACAUGCAUAG
+AGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUACUCCGCCAACGUUAUGGUACAUUAACUGCAGAGCAAU
+GGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGACAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF362401 Peaton virus strain CSIRO 110 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAGC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCGGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAGAUAAA
+ACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGCUGACUAUG
+UAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUACCCUUUAGUUAUCGACAUGCAUAG
+AGUACUAAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUACUCCGCCAACGUUAUGGUACAUUAACUGCAGAGCAAU
+GGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGACAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCUAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>NC_043557 Sango virus N and NSs genes, segment S, genomic RNA, isolate An 5077
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------GUGUACUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAAUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUUGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGAGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCAGGCUAUCUAGCUAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAAAUCAA
+ACUAGCGGAAGCUAUGGAAAAAAUCGUC-AUGCCACUUGCUGAAGUGAAAGGCUGCACUUGGACUGAAGGGCUGACUAUG
+UAUCUGGGAUUUGCACCUGGUGCAGAAAUGUUCCUGGAA-ACA--UUUGAAUUCUACCCUUUGGUUAUUGACAUGCAUAG
+AGUGCUAAAGGACGGAAUGGAUGUCAACUUUAUGAGAAAAGUCCUCCGUCAGCGUUACGGCACAUUGACUGCAGAGCAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGCGCAGCUUUUAAUGCUGUUGGCCAAUUGAGCUGGGCC-AAAUCUGGAUUCU
+CACCAGCAGCCAG-GACCUUCCUUGCCCAAUUUGGUAUCAAUAUCUAAAUUCAUAAAAGAAUCC----CACCCUUUCCCC
+CAGUAUGGUGUUUCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUUCUAUGUGGAGC--
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HE795101 Sango virus N and NSs genes, segment S, genomic RNA, isolate An 5077
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------GUGUACUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAAUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUUGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGAGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCAGGCUAUCUAGCUAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAAAUCAA
+ACUAGCGGAAGCUAUGGAAAAAAUCGUC-AUGCCACUUGCUGAAGUGAAAGGCUGCACUUGGACUGAAGGGCUGACUAUG
+UAUCUGGGAUUUGCACCUGGUGCAGAAAUGUUCCUGGAA-ACA--UUUGAAUUCUACCCUUUGGUUAUUGACAUGCAUAG
+AGUGCUAAAGGACGGAAUGGAUGUCAACUUUAUGAGAAAAGUCCUCCGUCAGCGUUACGGCACAUUGACUGCAGAGCAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGCGCAGCUUUUAAUGCUGUUGGCCAAUUGAGCUGGGCC-AAAUCUGGAUUCU
+CACCAGCAGCCAG-GACCUUCCUUGCCCAAUUUGGUAUCAAUAUCUAAAUUCAUAAAAGAAUCC----CACCCUUUCCCC
+CAGUAUGGUGUUUCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUUCUAUGUGGAGC--
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP900872 Shuni virus strain Shuni/2417/1/14 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------CACUAUAGAACAAAGCUUUUGAAUGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UYCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGUGGAGCA-
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP900878 Shuni virus strain Shuni/2504/2/14 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------------UAUUCCACUAUAGAACAAAG
+CUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGCCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGU-------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF362405 Shuni virus strain An10107 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAGUUUAUUUUCCAAAAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACCCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUGAAAGGUUGUACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACA--UUUGAGUUCUACCCUCUGGUCAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUAUGGGACAUUGACUGCAGAACAGU
+GGAUGACCCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAAGUAAACUGGGCCAAAAUCAGGAUUUU
+-ACCAGCUGCUAGA-ACUUUCCUUGCCCAAUUCGGUAUAAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF361849 Shuni orthobunyavirus isolate ISR-242/16 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---UUCCCACUAUAGAACAAAGCUUUUAAAUGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGACGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGUGGAG---
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP900860 Shuni virus strain Shuni/263/14 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------------UAUUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGURGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACURGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGUGGAGCAC
+ACUACA--------------------------------------------------------------------------
+--------------------------------------------------
+>KU937313 Shuni virus isolate 2504/3/14 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------CAGUAGUGUACUCCACUAUAGAACAAAG
+CUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGUGGAGCAC
+ACUACU--------------------------------------------------------------------------
+--------------------------------------------------
+>KP900883 Shuni virus strain Shuni/2504/3/14 isolate 2504/3/14 m nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------GUACUCCACUAUAGAACAAAG
+CUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGUGGAGCC-
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT946780 Shuni virus strain SHUV/ISR-2417/2/14 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------CACUAUAGAACAAAGCUUUUGAAUGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUWGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UYCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACYUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGUGGAGCA-
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP900869 Shuni virus strain Shuni/275/1/14 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------------UAUUCCACUAUAGAACAAAG
+CUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACUUUCCUUGCCCAAUUCG----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF361855 Shuni orthobunyavirus isolate ISR-2162/16 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-UAUUCCCACUAUAGAACAAAGCUUUUAAAUGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAA-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGACGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGUGGAG---
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF361846 Shuni orthobunyavirus isolate ISR-129/16 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------UAGAACAAAGCUUUUAAAUGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUAGUUAUUGACAUGCACAG
+AGUGCUAAAAGACGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGAAUC-UUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGUGGAGCAC
+ACCUACA-------------------------------------------------------------------------
+--------------------------------------------------
+>AB542963 Peaton virus genes for N protein, NSs protein, complete cds, strain: ON-10/E/01
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCUGGCUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGUAA--GACUAA---CCAAAUCAA
+ACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACUGAAGGACUCACCAUG
+UACCUAGGCUUUGCACCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUAACUGCAGAGCAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCCUUUAAUGCUGUUGGUCAACUAAGCUGGGCC-AAGUCAGGAUUCU
+CACCGGCAGCUAG-GACCUUCCUUGCCCAGUUUGGUAUAAACAUUUAAACAAAGAAAAAUCCC-----UACCCUUUUCCC
+CAGUAUGGUGUUUCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUUAUCUCUAUUGAUUGUUCUAU---------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP900867 Shuni virus strain Shuni/274/14 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------------UAUUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUAGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UYCGUGCAGCAUUCAAUGCUAUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGUGGAGCAC
+ACUACA--------------------------------------------------------------------------
+--------------------------------------------------
+>MF361852 Shuni orthobunyavirus isolate ISR-2067/16 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------------------------------AUUCCACUAUAGAACAAAG
+CUUUUAA-----A-----------------UGCC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAGUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGACGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGUGGAGCAC
+AACUACA-------------------------------------------------------------------------
+--------------------------------------------------
+>AF362402 Sango virus strain An5077 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUCCUUUUUCAAGAUGUUCCU-CAACGGAAUUC
+UGCUACGUUUAACCCGGAGGUUGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUUGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUGCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGAGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCAGGCUAUCUAGCUAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAAAUCAA
+ACUAGCGGAAGCUAUGGAAAAAAUCGUC-AUGCCACUUGCUGAAGUGAAAGGCUGCACUUGGACUGAAGGGCUGACUAUG
+UAUCUGGGAUUUGCACCUGGUGCAGAAAUGUUCCUGGAA-ACA--UUUGAAUUCUACCCUUUGGUUAUUGACAUGCAUAG
+AGUGCUAAAGGACGGAAUGGAUGUCAACUUUAUGAGAAAAGUCCUCCGUCAGCGUUACGGCACAUUGACUGCAGAGCAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGCGCAGCUUUUAAUGCUGUUGGCCAAUUGAGCUGGGCC-AAAUCUGGAUUCU
+CACCAGCAGCCAG-GACCUUCCUUGCCCAAUUUGGUAUCAAUAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KT946781 Shuni virus strain SHUV/ISR-2504/3/14 nucleocapsid protein gene, partial cds; and nonstructural protein-like gene, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------AACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UYCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGUGGAGCAC
+ACUACA--------------------------------------------------------------------------
+--------------------------------------------------
+>KP900859 Shuni virus strain Shuni/215/14 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------UUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UYCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAU-------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB542965 Peaton virus genes for N protein, NSs protein, complete cds, strain: KSB-1/P/06
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUCAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCCGGCUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUAA---CCAAAUCAA
+ACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGAGGGACUCACCAUG
+UACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUAACUGCAGAGCAGU
+GGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUUAAUGCUGUUGGUCAACUAAGCUGGGCC-AAGUCAGGAUUCU
+CACCAGCAGCUAGA-ACCUUCCUUGCCCAGUUUGGUAUAAACAUUUAAACAAGAAAAAAUCCC-----UACCCUUUUCCC
+CAGUAUGGUGUUUCAGAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUUCUAU---------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP900882 Shuni virus strain Shuni/2504/3/14 isolate 2504/3/14 v nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------UUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUAGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UYCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACCUUCCUUGCCCAAUUCGGUAUAAACAUCUAAAUUCUUAAAACAACCCCA---CCCCUUUUCCC
+UAGUAUGGUGUUCCAAAACACCAUACGCCAUUUCUGCAGCAUUGUUCAUUUAUCUCUAAUAAUUGUUCUAUGUGGAGCAC
+ACUACA--------------------------------------------------------------------------
+--------------------------------------------------
+>AY048680 Peaton virus strain NS-3/P/99 nucleoprotein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUAGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCCGGCUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUAA---CCAAAUCAA
+ACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGCUGCACCUGGACCGAAGGACUCACCAUG
+UACCUAGGAUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUAACUGCAGAGCAGU
+GGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUUAAUGCUGUUGGUCAACUAAGCUGGGCC-AAGUCAGGAUUCU
+CACCAGCAGCUAG-GACCUUCCUUGCCCAGUUUGGUAUAAACAUUUAAACAAAGAAAAAUCCC-----UACCCUUUCCCC
+CAGUAUGGUGUUUCAGGACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUUCUAU---------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY048679 Peaton virus strain MZ-4/C/99 nucleoprotein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCCGGCUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUAA---CCAAAUCAA
+ACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGAAGGACUCACCAUG
+UACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUAACUGCAGAGCAGU
+GGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUUAAUGCUGUUGGUCAACUAAGCUGGGCC-AAGUCAGGAUUCU
+CACCAGCAGCUAG-GACCUUCCUUGCCCAGUUUGGUAUAAACAUUUAAACAAAGAAAAAUCCC-----UACCCUUUCCCC
+CAGUAUGGUGUUUCAGAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUUCUAU---------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB542964 Peaton virus genes for N protein, NSs protein, complete cds, strain: ON-1/P/05
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUCGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCAAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCCGGCUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUAA---CCAAAUCAA
+ACUAGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGAAGGACUCACCAUG
+UACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGUACAUUAACUGCAGAGCAGU
+GGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUUAAUGCUGUUGGUCAACUAAGCUGGGCC-AAGUCAGGAUUCU
+CACCAGCGGCUAG-GACCUUCCUUGCCCAAUUUGGUAUAAACAUUUAAACAAAGAAAAAUCCC-----UACCCUUUUCCC
+CAGUAUGGUGUUUCAGAACACCAUACGCCAUUUCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUUCUAU---------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB542962 Peaton virus genes for N protein, NSs protein, complete cds, strain: OYE-56-8
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------AGAACAAAGCUUUUAAAUGGC------AAACCAAUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACAUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAAUAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAAUCAGAAGAAGGCCAA-GAUGGUCCUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCCGGCUAUCUAGCUAAGUGGG---UUGCAGACC-AGUGCAA--GACCAA---CCAAAUCAA
+GCUGGCUGAGGCCAUGGAGAAAAUCGUC-AUGCCACUUGCUGAGGUGAAGGGUUGCACCUGGACCGAAGGACUCACCAUG
+UACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCCCUAGUUAUUGAUAUGCACAG
+AGUGCUAAAAGACGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUAACUGCAGAGCAAU
+GGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUUAAUGCUGUUGGUCAACUAAGCUGGGCC-AAGUCAGGAUUCU
+CACCAGCAGCCAG-GACCUUCCUUGCUCAAUUUGGUAUAAACAUUUAAACAAAGAAAAACCCC-----UACCCUUUUCCC
+UAGUAUGGUGUUUCAUAACACCAUACGCCAUUCCUGCAGCAUUGUUUAUUCAUCUCUAUUGAUUGUUCUAU---------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP900862 Shuni virus strain Shuni/267/4/14 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------------UAUUCCACUAUAGAACAAAG
+CUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUAUGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UC-----------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP900877 Shuni virus strain Shuni/2504/1/14 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------------UAUUCCACUAUAGAACAAAG
+CUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UAAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACAUUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCA--------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP900871 Shuni virus strain Shuni/275/2/14 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------------UAUUCCACUAUAGAACAAAG
+CUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCG---------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP900861 Shuni virus strain Shuni/267/2/14 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------------UAUUCCACUAUAGAACAAAG
+CUUUUGA-----A-----------------UGGC------AAACCAGUUUAUUUUCCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUAUUGCUAAACAUGGGGCC-CAAC-UCAAUUUCGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UC-----------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KU296970 Akabane virus isolate Aksu-2 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----ACAUUUAAUCCGGAUGCAGGGUAUGUGGCAUUUAUCAGUAAGUAU-GGGCAACAGC-UCAACUUUGCUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGAUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUGACUGCAGAGGAGU
+GGAUGACAUCUAAGUUAGAUGCAG-UUAAGGCUGCAUUUAACUCAGUUGCCCAGAUAUCCUGG-----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP900865 Shuni virus strain Shuni/273/14 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------CGAUACCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACUUUCCUUGCCCAAUUCG----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP900870 Shuni virus strain Shuni/275/1/14 isolate 275/1/14 m nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------------------------------------------CCGUUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUACUCAGUAAGACGGCACAACCGAG-----UGUUGAUCUUACAU
+UUGGUGGC---AUCA--AAUUUACACUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAGGGUUGCACCUGGACUGAGGGGUUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUCCUGGAG-ACU--UUUGAGUUCUACCCCCUGGUUAUUGACAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUACGGGACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UUCGUGCAGCAUUCAAUGCUGUUGGGCAGCUAAGCUGGGCC-AAAUCAGGAUUCU
+CACCAGCUGCCAGA-ACUUUCCUUGCCCAAUUCG----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734995 Thimiri orthobunyavirus isolate cs0001 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AAACCAAUUCAUUUUUCAAGAUGUUCCU-CAACGGAAUCU
+CGCUACGUUUAACCCGGAGGUCGGGUAUGUGGCAUUUACUGCUAAAUAUGGGGCC-CAAC-UCACUGUUGAUACAGCUCG
+AGUGUUCUUCCUCAAUCAGAAGCGCGCCAAGGAUCGUC-UCCGUCAGACGUCGCAACCAGU-----UGUCGAUCUUACAU
+UUAACAAGCACGUC-----UUUCGAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGUCUCUCAGGAUAUUUAGCUAAAUGGG---UUGCAGAUC-AAUGCAA--GACAAA---CCAGAUAAA
+AUUGGCUGAGGCCAUGGAAAAAAUUAUC-AUGCCACUUGCUGAAGUGAAAGGCUGUACCUGGACUGAAGGACUAACUAUG
+UAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUGGUUAUUGAUAUGCAUAG
+AGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAUUGACUGCAGAGCAAU
+GGAUGACUCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUCAAUGCUGUUGGGCAAUUGAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCAGCCAGA-ACCUUCCUUGCCCAAUUUGGUAUAAAUAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>NC_043576 Jatobal virus nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACGU
+AAAAUAA-----AACAUACAAGA-------UGUC---------AGAAUUCGUUUUCAAUGAUGUACCA-CAAAGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAAAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACGUCGCGGCCCAU-----GGUUGAACUUACUU
+UUGGAGGG---GUUA--AAUUUACAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGGCAAAUCCGGUGCCAGACAACGGU
+CUUACCUUACACCGUCUGUCAGGAUAUCUAGCUCGUUGGGCUUUCACCCAA---AUGA----GAUCU-----CCUCUGAA
+ACAAGCAGAGUUUAGAGCUGCAAUUGUG-AUCCCUUUAGCCGAAGUUAAGGGGUGCACUUGGAAUGAUGGUGAUGCCAUG
+UACUUGGGAUUUGCUGCUGGUGCAGAAAUGUUUCUGCAA-ACA--UUUACAUUUUUUCCUCUUGUCAUAGAGAUGCAUAG
+AGUUUUAAGAGAUGGCAUGGAUGUUAACUUCAUGAAAAAAGUAUUAAGACAACGCUAUGGACAAAAAACUGCUGAACAAU
+GGAUGAAGGAGGAAAUAAUUGCUG-UUAGAGCAGCAUUUGAAGCAGUUGGAACUCUAGCUUGGGCU-AGAACAGGAUUCU
+CUCCUGCUGCUAGAGAA-UUCUUGCGCCAGUUUGGAAUUGAUCUUUAAAGCUUAAUUAUUGCAUAAGUAGUCAAAUAGAU
+AAUAAAUAAAACAAAAAAUACAAAAAAAGUAUAAAAUAUAAAAACACAAAAAAAGUGCGAAAGCACAAAUUAGCACUGCA
+GUACUUAUUGAGGGUUGGGAGGUUGGGGAAACUAUAUAAUUA----CU------------------AUGUCAUUUUUUUA
+GAUGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>JQ675601 Jatobal virus nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACGU
+AAAAUAA-----AACAUACAAGA-------UGUC---------AGAAUUCGUUUUCAAUGAUGUACCA-CAAAGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAAAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACGUCGCGGCCCAU-----GGUUGAACUUACUU
+UUGGAGGG---GUUA--AAUUUACAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGGCAAAUCCGGUGCCAGACAACGGU
+CUUACCUUACACCGUCUGUCAGGAUAUCUAGCUCGUUGGGCUUUCACCCAA---AUGA----GAUCU-----CCUCUGAA
+ACAAGCAGAGUUUAGAGCUGCAAUUGUG-AUCCCUUUAGCCGAAGUUAAGGGGUGCACUUGGAAUGAUGGUGAUGCCAUG
+UACUUGGGAUUUGCUGCUGGUGCAGAAAUGUUUCUGCAA-ACA--UUUACAUUUUUUCCUCUUGUCAUAGAGAUGCAUAG
+AGUUUUAAGAGAUGGCAUGGAUGUUAACUUCAUGAAAAAAGUAUUAAGACAACGCUAUGGACAAAAAACUGCUGAACAAU
+GGAUGAAGGAGGAAAUAAUUGCUG-UUAGAGCAGCAUUUGAAGCAGUUGGAACUCUAGCUUGGGCU-AGAACAGGAUUCU
+CUCCUGCUGCUAGAGAA-UUCUUGCGCCAGUUUGGAAUUGAUCUUUAAAGCUUAAUUAUUGCAUAAGUAGUCAAAUAGAU
+AAUAAAUAAAACAAAAAAUACAAAAAAAGUAUAAAAUAUAAAAACACAAAAAAAGUGCGAAAGCACAAAUUAGCACUGCA
+GUACUUAUUGAGGGUUGGGAGGUUGGGGAAACUAUAUAAUUA----CU------------------AUGUCAUUUUUUUA
+GAUGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KU296969 Akabane virus isolate Aksu-1 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------AUCAGUAAGUAU-GGGCAACAGC-UCAACUUUGCUGUUGCUAG
+AGUCUUCUUCCUCAACCAGAAGAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGAUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUGACUGCAGAGGAGU
+GGAUGACAUCUAAGUUAGAUGCA---------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>DQ993247 Aino virus strain KSA 9910 S protein mRNA, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------UGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUUACUCUCCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGUAAA--ACGAA---UCAGAUUAA
+AUUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUGGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGGCUGACUAUG
+UAUCUGGGAUUUGCACCAGGUGCUGAAAUGUUUUUAGAA-ACA--UUUGAAUUCUACCCUUUGGUUAUUGAUAUGCACAG
+AGUGCUGAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCCUUCGCCAGCGCUACGGCACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGUUGGGCAGCUAAGCUGGGCU-AAAUCAGGAUUCU
+CACCAGCUGCUAGAG-CCUUCCUUGCCCAAUUUGGCAUAAACAUCUAAAUUCCUGUAAAACCCCACC-------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP795086 Oropouche virus strain TVP-19256/IQE-7894 structural nucleocapsid protein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------GUAGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA------AAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUACAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAACAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCCGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUUGACAUAUAGUGGAGUACAAUAAACAAACAAAAUAUAAUAUA
+AAAUACAAAAAGAAAUAAAAUAACAAAUACAAAAACAUAAAAAUAUAUAAAAUAAAUAAAAAGU----------------
+----GCGAAAGCACAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUUGG-------------------------------
+>KC759127 Oropouche virus strain IQT-1690 segment S nucleocapsid protein (N) and nonstructural protein (NS) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUGCUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUUAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCUUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGAUUUGCUGCCGGUGCCGAGAUGUUUUUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACA-----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MK643115 Oropouche orthobunyavirus strain FCT00025/COL/2018 nucleoprotein (N) and nonstructural protein (NS) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------UGUACUCCACAAUUCAAAACAU
+AAAAAGA------AAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCW-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACGUCGCGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAAUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUGG-UGCCUUUGGCAGAGGUGAAGGGUUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUCCUCAAGGACGGCAUGGAUGUCAAUUUCAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUUGACAUAUAGUGAAGUACAAUAAACAAACAAAAUAUAAUAUA
+AAAUACARAA----------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF926352 Oropouche virus strain OROV/EC/Esmeraldas/087/2016 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA------AAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACGUCGCGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAAUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUGG-UGCCUUUGGCAGAGGUGAAGGGUUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUCCUCAAGGACGGCAUGGAUGUCAAUUUCAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUUGACAUAUAGUGGAGUACAAUAAACAAACAAAAUAUAAUAUA
+AAAUACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAA----------AAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP795089 Oropouche virus strain TVP-19257/IQT-1690 structural nucleocapsid protein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUUAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCUUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGAUUUGCUGCCGGUGCCGAGAUGUUUUUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAACAAAAAAG----------------
+--UGCGAAAGCACAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGG------------------------------
+>AF164549 Oropouche virus strain IQT1690 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCUUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGAUUUGCUGCCGGUGCCGAGAUGUUUUUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747593 Oropouche virus isolate BeH 708139 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUUAAUAA-------UGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCAAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUAUAAUAAACAAAUAAAAUAUAAAAUA
+CCAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAA-A---------A----AA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747587 Oropouche virus isolate PMOH 682426 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUUAAUAA-------UGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUGAUGGAGUAUAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAAA-A---------A-----A
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470135 Oropouche virus strain BeH708139 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCAAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830475 Oropouche virus isolate H708139 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCAAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>EF467371 Oropouche virus strain PMOH 682426 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUGA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747599 Oropouche virus isolate BeH 708717 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUUAAUAA-------UGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUAUAAUAAACAAAUAAAAUAUAAAAUA
+CCAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAACAAA-A---------A----AA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470138 Oropouche virus strain BeH708717 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUGCUCCACAAUUCAAAACAU
+AAAAAGA------AACUCCAAUA------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGCACACUACU------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470136 Oropouche virus strain BeH707157 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUGCUCCACAAUUCAAAACAU
+AAAAAGA------AACUCCAAUA------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAC-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGCACACUACU------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830477 Oropouche virus isolate H708717 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830476 Oropouche virus isolate H707157 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAC-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP795098 Oropouche virus strain TVP-19260/MD-203 structural nucleocapsid protein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------CUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAGGAAUAAAAUGACAAAAAUACAAAAAAAACUAAAAAACAUAUAAAAUAAAUAAA-A---------A----AA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUGAAUUGGGA-------------------------------
+>KP795080 Oropouche virus strain TVP-19250/GML-444839 structural nucleocapsid protein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUACAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAGACUGCUGAGCAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAA------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF697144 Iquitos virus isolate IQT9924 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCAUCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAA---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACG--UUCACUUUUUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUCAUGAAGAAAGUCCUCCGGCAGAGGUAUGGCCAGAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUUGACAUAUAGUGGAGUACAAUAAACAAACAAAAUAUAAUAUA
+AAAUAC---------AAAAAAAGAAAUAAAAUAAUAAAAAAUACAAAAAAACUAAAAAAUCUAUAAAAUAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KF150525 Iquitos virus strain IQE1704/PER/05 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGA----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUGG-UGCCUUUAGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACG--UUCACUUUUUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUUAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGACAGAGGUAUGGCCAGAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACCGGGUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF150523 Iquitos virus strain IQE1217/PER/05 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGA----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUAGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACG--UUCACUUUUUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUUAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGACAGAGGUAUGGCCAGAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACCGGGUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF150522 Iquitos virus strain IQE1005/PER/05 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGA----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUAGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACG--UUCACUUUUUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUUAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGACAGAGGUAUGGCCAGAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACCGGGUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164543 Oropouche virus strain BeH505663 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------GGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGGAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747596 Oropouche virus isolate BeH 707287 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAAUUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUAUAAUAAACAAAUAAAAUAUAAAAUA
+CCAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAACAAA-A---------A----AA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470137 Oropouche virus strain BeH707287 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAAUUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP795092 Oropouche virus strain TVP-19258/IQT-4083 structural nucleocapsid protein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUGCUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGGCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAGGAAUAAAAUGACAAAAAUACAAAAAAACUAAAAAACAUAUAAAAUAAAUAAAA-A---------A-----A
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUA----------------------
+>MG747605 Oropouche virus isolate BeH 505768 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUACACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+ACAAGCCGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCAUUGAGAUGCACAG
+GGUCCUCAAAGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAGGAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAACAUAUAAAAUAAAUAAAA-A---------A-----A
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747590 Oropouche virus isolate PMOH 682431 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAAUUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGGAUAUGAUGGAGUAUAAUAAACAAAUAAAAUAUAAAAUA
+CCAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAACAAA-AA--------A-----A
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747548 Oropouche virus isolate BeH 355173 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUCAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUGAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUCGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAGGAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAAA-A---------A-----A
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MH331909 Peaton virus nucleocapsid protein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------------------------UCUUACAU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCGGGAUAUUUAGCCAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---CCAAAUAAA
+ACUGGCCGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACCGAGGGGCUGACCAUG
+UAUUUAGGCUUUGCACCAGGCGCAGAAAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUUUAGUUAUUGACAUGCAUAG
+AGUACUAAAAGAUGGGAUGGAUGUCAACUUUAUGAGAAAGGUCCUCCGCCAACGUUAUGGUACAUUAACUGCAGAGCAAU
+GGAUGACCCAAAAGAUAGAUGCAG-UUCGUGCAGCCUUUAAUGCUGUUGGACAAUUAAGCUGGGCCAA------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP795095 Oropouche virus strain TVP-19259/IQT-7085 structural nucleocapsid protein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUUAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAAAAAAGUGCGAAAGCACAAA
+AAAAGAACUGCAG-------------------------------------------------------------------
+--------------------------------------------------
+>KJ866386 Iquitos virus strain MIS-0397 nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------GUAGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA------AAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCAAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUUUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUCAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAAGUGAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUCAUGAAGAAAGUCCUCCGGCAGAGGUAUGGCCAGAAGACUGCUGAACAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGACUUU-UUGCGUCAAUUUGGAAUUGACAUAUAGUGGAGUACAAUAAGCAAAGAAAAUAUAAUAUA
+AAAUACAAAAAGAAAUAAAAUAACAAAAAUACAAAAACUAAAAAUAUAUAAAAUAAAUAAAAAG----------------
+---UGCGAAAGCACAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGG-------------------------------
+>HM470141 Oropouche virus strain BeH505768 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUACACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+ACAAGCCGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCAUUGAGAUGCACAG
+GGUCCUCAAAGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470112 Oropouche virus strain BeH244576 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUCCACCGCCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+AGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCCGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470114 Oropouche virus strain BeH355173 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUCAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUGAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUCGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830459 Oropouche virus isolate H505768 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUACACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+ACAAGCCGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCAUUGAGAUGCACAG
+GGUCCUCAAAGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830444 Oropouche virus isolate H244576 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUCCACCGCCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+AGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCCGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>EF467372 Oropouche virus strain PMOH 682431 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAAUUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGGAUAUGA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164550 Oropouche virus strain MD023 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUUAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470133 Oropouche virus strain BeH706890 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUGCUCCACAAUUCAAAACAU
+AAAAAGA------AACUCCAAUA------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGCACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUCAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUACGGCAGAGGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGCACACUACU------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830473 Oropouche virus isolate H706890 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGCACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUCAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUACGGCAGAGGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH484293 Buttonwillow virus strain A 7956 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------GUGUGCUCCACAAUUCAAAAACA
+AAAAGU------CUAAUUAAACA------AUGUC---------UGAGUUCAUCUUUAAUGAUGUACCU-CAACGGUCUAC
+AUCUACGUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCAGUACAGAGCA--AGCCUCAGCGUUAGUGUCGCUAG
+AAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUC-UACGUCAGACGUCACAACCAAA-----UGUCAAUCUUACUU
+UUGGCCAGUCAGUC-----UUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCGGUGCCAGAUAACGGU
+CUUACCCUGCACCGCCUCUCCGGUUACCUUGCGAGAUGGUUAAUGGAUCAG---AU-CAG--GGUUGGAGGUUCUGUACG
+AGAGGCAGAAAUUAGGGGAGCAAUAGUG-AUACCACUUGCAGAAAUAAAAGGCUGCACUUGGAAUGAUGGCAAUGCUAUG
+UAUUUGGCAUUUGCUGCUGGGACAGAAAUGUUUCUGCAG-ACA--UUUACAUUCUUCCCAUUAGCAAUUGAAAUGCAACG
+CGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAAGAAAGUAAUAAGGCAGAGAUAUGGGACACUAACUGCUGAGCAAU
+GGAUGAGACAGGAGGUGACUGCAG-UCACAGCAGCAUUUAAUGCUGUUGGAUUGCUGCCUUGGGCU-AGAUCUGGAUUCU
+CUCCAGUGGCUAGAGAG-UUCUUGAGGAACUUUGGUAUUAAUAUCUAAGCGGGGUAAAUAAAAUAAAAAAUAUAAAACAA
+AAAAUACAAAAAAAUAAUAAAAAUAUAAAAAUCCAAAAAAAUAGUAGUGUUUAGAUUUCUAAACACU-------------
+----A------CACAAAAUCAGCUGCAAAUGGGUUGGGUGGUUGGGGCAAAUCACAGUCUAAAUCAUUUUAUGUUCAUUA
+UCAUUAUUUUUGAAUUGGGAGCA---------------------------
+>MG747569 Oropouche virus isolate BeH 541140 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUCCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAGGAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAACAUAUAAAAUAAAUAAAAAA---------A------
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP795074 Oropouche virus strain TVP-19244/DEI-216 structural nucleocapsid protein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------CUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAA---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUAUAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAAUAAAAAAAGUGACGAAAAGCAC
+AAAAAAAGAAACUGCAGCU-------------------------------------------------------------
+--------------------------------------------------
+>KF697146 Madre de Dios virus isolate FMD 1303 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGCCAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAAAAGGCCAAAGAU-GUCUUACGUAAGACGUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCAAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCUGGAUACUUAGCACGCUGGGCUUUUACCCAA---AUGA----GGUCA-----CCCAUCAA
+ACAGGCUGAGUUUAGGGCUACUGUAGUUG-UGCCCCUUGCAGAAGUGAAAGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACUUAGGGUUUGCAGCUGGUGCUGAGAUGUUCUUGCAA-ACA--UUCACCUUUUUCCCUCUGGUGAUUGAAAUGCACAG
+AGUUCUCAAGGAUGGCAUGGAUGUCAACUUCAUGAAGAAAGUUCUUCGACAGCGGUAUGGCCAAAAGACUGCUGAGCAGU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-CGGACUGGAUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAACAGAUAAGUAAAAUAUAUAAAA
+UAAAAAAAAGAUAAAAAUAAUAAAAAUACAAAAAAAGUAAAAAAUAUAAAAUAAAAUAAAAA-A---------A------
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUUCAAAGGGUUGGGUGGUUGGGGAAAGCUAUAUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KF150535 Iquitos virus strain IQE3728/PER/06 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGCGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAA---AUGA----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUAGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCCGGUACUGAGAUGUUUCUGCAG-ACG--UUCACUUUUUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUUAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGACAGAGGUAUGGCCAGAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACCGGGUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470142 Oropouche virus strain BeH505805 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470126 Oropouche virus strain BeH541140 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUCCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830460 Oropouche virus isolate H505805 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY237111 Oropouche virus segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUGCUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAGAGGUAUGGUCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGCACACUACU------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164554 Oropouche virus strain IQT7085 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164551 Oropouche virus strain DEI209 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAA---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAAAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164535 Oropouche virus strain BeH381114 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGUCAAAAAACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUUGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164532 Oropouche virus strain BeAn19991 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAGAGGUAUGGUCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470134 Oropouche virus strain BeH706893 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUGCUCCACAAUUCAAAACAU
+AAAAAGA-----AACUCCAAUAA-------UGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGCACUAC
+AUCCACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUCAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGCCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUCGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUACGGCAGAGGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGCACACUACU------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830474 Oropouche virus isolate H706893 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGCACUAC
+AUCCACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUCAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGCCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUUG-UGCCUUUGGCAGAGGUGAAGGGAUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUCGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUACGGCAGAGGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGGACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164542 Oropouche virus strain BeH505442 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAAUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAA-GCA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAAUUUUAUGAAAAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>NC_043598 Buttonwillow virus isolate BFS 5002 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAAACA
+AAAAGU------CUAAUUAAACA------AUGUC---------UGAGUUCAUCUUUAAUGAUGUACCU-CAACGGUCUAC
+AUCCACGUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCAGUACAGAGCA--AGCCUCAGCGUUAGUGUCGCUAG
+AAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUC-UACGUCAGACGUCACAACCAAA-----UGUCAAUCUUACUU
+UUGGCCAGUCAGUC-----UUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCGGUGCCAGAUAACGGU
+CUUACCCUGCACCGCCUCUCCGGUUACCUUGCGAGAUGGUUAAUGGAUCAG---AU-CAG--GGUUGGAGGUUCUGUACG
+AGAGGCAGAAAUUAGGGGAGCAAUAGUG-AUACCACUUGCAGAAAUAAAAGGCUGCACUUGGAAUGAUGGCAAUGCUAUG
+UAUUUGGCAUUUGCUGCUGGGACAGAAAUGUUUCUGCAG-ACA--UUUACAUUCUUCCCAUUAGCAAUUGAAAUGCAACG
+CGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAAGAAAGUAAUAAGGCAGAGAUAUGGGACACUAACUGCUGAGCAAU
+GGAUGAGACAGGAGGUGACUGCAG-UCACAGCAGCAUUUAAUGCUGUUGGAUUGCUGCCUUGGGCU-AGAUCUGGAUUCU
+CUCCAGUGGCUAGAGAG-UUCUUGAGGAACUUUGGUAUUAAUAUCUAAGCGGGGUAAAUAAAAUAAAAAAUAUAAAACAA
+AAAAUACAAAAAAAUAAUAAAAAUAUAAAAAUCCAAAAAAAUAGUAGUGUUUAGAUUUCUAAACACUACACAAAAUCAGC
+UGCAAAUGGGUUGGGUGGUUGGGGCAAAUCACAGUCUAAAUCAUUUUAUGUUCAUUAUCAUUAUUUUUGAAUUUGGAAGC
+ACACUACU------------------------------------------
+>KF697162 Buttonwillow virus isolate BFS 5002 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAAACA
+AAAAGU------CUAAUUAAACA------AUGUC---------UGAGUUCAUCUUUAAUGAUGUACCU-CAACGGUCUAC
+AUCCACGUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCAGUACAGAGCA--AGCCUCAGCGUUAGUGUCGCUAG
+AAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUC-UACGUCAGACGUCACAACCAAA-----UGUCAAUCUUACUU
+UUGGCCAGUCAGUC-----UUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCGGUGCCAGAUAACGGU
+CUUACCCUGCACCGCCUCUCCGGUUACCUUGCGAGAUGGUUAAUGGAUCAG---AU-CAG--GGUUGGAGGUUCUGUACG
+AGAGGCAGAAAUUAGGGGAGCAAUAGUG-AUACCACUUGCAGAAAUAAAAGGCUGCACUUGGAAUGAUGGCAAUGCUAUG
+UAUUUGGCAUUUGCUGCUGGGACAGAAAUGUUUCUGCAG-ACA--UUUACAUUCUUCCCAUUAGCAAUUGAAAUGCAACG
+CGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAAGAAAGUAAUAAGGCAGAGAUAUGGGACACUAACUGCUGAGCAAU
+GGAUGAGACAGGAGGUGACUGCAG-UCACAGCAGCAUUUAAUGCUGUUGGAUUGCUGCCUUGGGCU-AGAUCUGGAUUCU
+CUCCAGUGGCUAGAGAG-UUCUUGAGGAACUUUGGUAUUAAUAUCUAAGCGGGGUAAAUAAAAUAAAAAAUAUAAAACAA
+AAAAUACAAAAAAAUAAUAAAAAUAUAAAAAUCCAAAAAAAUAGUAGUGUUUAGAUUUCUAAACACUACACAAAAUCAGC
+UGCAAAUGGGUUGGGUGGUUGGGGCAAAUCACAGUCUAAAUCAUUUUAUGUUCAUUAUCAUUAUUUUUGAAUUUGGAAGC
+ACACUACU------------------------------------------
+>MG747602 Oropouche virus isolate BeH 498913 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUCAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAAGAAAUAAUAUAACAAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAA-A------------AAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP795077 Oropouche virus strain TVP-19249/GML-444672 structural nucleocapsid protein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAA------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP691623 Oropouche virus isolate BeH759620 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUUCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAGCAAAUAAAAUAUAAAAUA
+CAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAAAAAAGU-------------
+---GCGAAAGCACAAAAAAGAACUGCAGCUGUAAUAUUACAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KC759130 Oropouche virus strain GML-444479 segment S nucleocapsid protein (N) and nonstructural protein (NS) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACA-----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470140 Oropouche virus strain BeH505764 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUCUCGGGAUACCUAGCUCGGUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAAAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470139 Oropouche virus strain BeH498913 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUCAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830478 Oropouche virus isolate H758687 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUUGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830458 Oropouche virus isolate H505764 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUCUCGGGAUACCUAGCUCGGUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUCAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAAAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830457 Oropouche virus isolate H498913 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUCAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164555 Oropouche virus strain GML444477 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164553 Oropouche virus strain 01-812-98 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164536 Oropouche virus strain BeH390233 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGGGCCAAUUCGGAAUUGGGAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF620127 Oropouche virus culture NCPV:1409261v segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACUCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACG--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUCUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP026181 Oropouche virus strain TRVL9760 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACUCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACG--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUCUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KC759124 Oropouche virus strain TRVL-9760 segment S nucleocapsid protein (N) and nonstructural protein (NS) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACUCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACG--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACA-----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164531 Oropouche virus strain TRVL9760 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACUCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACG--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747581 Oropouche virus isolate PPS 522 H 669314 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUCCAACGAUGUACCA-CAUCGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGUCAAAAAACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUUGCAUAUGAUGGAGUACAGUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747551 Oropouche virus isolate BeAr 366927 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUUCAAUAA-------UGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUACUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGGGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAGGAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAACAUAUAAAAUAAAUAAAAAA---------A------
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747512 Oropouche virus isolate BeH 472433 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUCGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUGAACUUUAUGAAGAAAGUUCUACGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAAGAAAUAAUAUAACAAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAA-A------------AAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP691629 Perdoes virus isolate BeAn790177 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAGCAAAUAAAAUAUAAAAUA
+CAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAAAAA---------A------
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUACAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP691632 Oropouche virus isolate BeH759146 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAGCAAAUAAAAUAUAAAAUA
+CAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAAAAAAAGU-------------
+---GCGAAAGCACAAAAAAGAACUGCAGCUGUAAUAUUACAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP052852 Oropouche virus strain BeAn19991 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAGUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KJ866389 Madre de Dios virus strain INHRR 17a-10 structural nucleocapsid protein and nonstructural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGCCAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAAAAGGCCAAAGAU-GUCUUACGUAAGACGUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCAAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCUGGAUACUUAGCACGCUGGGCCUUUACCCAA---AUGA----GGUCA-----CCCAUCAA
+ACAGGCUGAGUUUAGGGCUACUGUAGUUG-UGCCCCUUGCAGAAGUGAAAGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACUUAGGGUUUGCAGCUGGUGCUGAGAUGUUCUUGCAA-ACA--UUCACCUUUUUCCCUCUGGUGAUUGAAAUGCACAG
+AGUUCUCAAGGAUGGCAUGGAUGUCAACUUCAUGAAGAAAGUUCUUCGACAGCGAUAUGGCCAAAAGACUGCUGAGCAGU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-CGGACUGGAUUCU
+CUCCAGCAGCAAGAGA-UUUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAACAGAUAAGUAAAAUAUAUAAAA
+UACAAAAAAAGAUAAAAAUAAUAAAAAUACAAAAAAAAGUAAAAAAUAUAAAAUAAAAUAAAAAAA--------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470117 Oropouche virus strain BeAr366927 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUACUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGGGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470105 Oropouche virus strain BeH472433 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUCGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUGAACUUUAUGAAGAAAGUUCUACGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830491 Oropouche virus isolate H759044 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830489 Oropouche virus isolate H759042 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGUUUCU
+CCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830488 Oropouche virus isolate H759041 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAACGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830486 Oropouche virus isolate H759018 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACCAC
+CUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830485 Oropouche virus isolate H759562 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830484 Oropouche virus isolate H759038 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCGUGGGCC-AGGACUGGAUUCU
+CCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830483 Oropouche virus isolate H75955 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGACAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830481 Oropouche virus isolate H759541 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830472 Oropouche virus isolate H543880 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830455 Oropouche virus isolate H472433 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUCGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUGAACUUUAUGAAGAAAGUUCUACGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830448 Oropouche virus isolate AR366927 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUACUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGGGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830445 Oropouche virus isolate H271078 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>EF467370 Oropouche virus strain PPS 522 H 669314 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUCCAACGAUGUACCA-CAUCGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGUCAAAAAACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUUGCAUAUGA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY704565 Oropouche virus strain BeH 543880 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164557 Oropouche virus strain GML445252 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGUUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164556 Oropouche virus strain GML444911 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGUUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUUACAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164552 Oropouche virus strain IQT4083 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUUAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAAAGGUAUGGCAAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164533 Oropouche virus strain BeH271815 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747575 Oropouche virus isolate BeH 543760 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAUAAAAUAUAAAACA
+CAAAAACAAAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAA---------A------
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747572 Oropouche virus isolate BeH 543629 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAUAAAAUAUAAAACA
+CAAAAACAAAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAAA--------G------
+-UGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747521 Oropouche virus isolate BeAn 626990 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAAGAAAUAAUAUAACAAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAA-A------------AAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747503 Oropouche virus isolate BeH 543100 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUUC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCGACUGUGGUAG-UGCCUUUGGCAGAGGUCAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUCCAG-ACA--UUCACUUUCUUCCCUUUAGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAAUA
+CAAAAAAAAGAAAUAAAAUAACAAAAAAUACAAAAAAACUAAAAAAUAUAUAAAAUAAAUAA-A------------AAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>KP795104 Oropouche virus strain TVP-19264/PAN-481126 structural nucleocapsid protein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------------------------------------CAGCUGUGAUGUU
+AUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAAAACGUAUUUUUAGUAGUGUGCUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAGUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUUUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUACAA-ACA--UUCACUUUCUUUCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGAUAUAUAGUGGAGUACAGCAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAAAAUUAAAAAUAUAUAAAAU--AAAUAAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAG------------------------------------
+--------------------------------------------------
+>KP795083 Oropouche virus strain TVP-19254/GML-480914 structural nucleocapsid protein and non-structural protein genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAGUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUUUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUACAA-ACA--UUCACUUUCUUUCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGAUAUAUAGUGGAGUACAGCAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAAAUUAAAAAUAUAUAAAA---UAAAUAAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUG---------------------------
+--------------------------------------------------
+>HM470115 Oropouche virus strain BeH355186 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCAUUUUCAGCGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470113 Oropouche virus strain BeAr271708 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCUUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGCAAGACAUCCAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCUUACACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCAGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUGAACUUUAUGAAGAAAGUACUUCGGCAAAAGUAUGGCCAAAAGACUGCUGAACAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGGGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470102 Oropouche virus strain BeH543100 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUUC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCGACUGUGGUAG-UGCCUUUGGCAGAGGUCAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUCCAG-ACA--UUCACUUUCUUCCCUUUAGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830487 Oropouche virus isolate H759023 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830470 Oropouche virus isolate H543760 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830466 Oropouche virus isolate H543100 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGACCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUUC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCGACUGUGGUAG-UGCCUUUGGCAGAGGUCAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUCCAG-ACA--UUCACUUUCUUCCCUUUAGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>EF467368 Oropouche virus strain BeH 622544 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAGCGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY704568 Oropouche virus strain BeH 543760 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY704567 Oropouche virus strain BeH 543790 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY704563 Oropouche virus strain BeH 543629 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCUACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY117135 Oropouche virus strain BeAn 626990 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUGCUCCACAAUUCAAAACAU
+AAAAAGA-----AACUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGCACACUACU------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164558 Oropouche virus strain GML450093 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUAGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCAUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUGAAGGGCUGUACUUGGAACGACGGUGACGCAAUG
+UAUCUGGGAUUUGCUGCUGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGUAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAGAGGUACGGUCAGAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGCAGCCUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGGUUCU
+CUCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164541 Oropouche virus strain BeH504514 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAGCGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164534 Oropouche virus strain BeH379693 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAGGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164546 Oropouche virus strain BeH544552 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAAUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF312382 Jatobal virus nucleoprotein (N) gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAAUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAAGUGAAAGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAAAUGUUUCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAAAAAGUCCUCCGGCAAAAGUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAAUUGCUG-UAAAAACAACUUUUGAAGCUUUAGGCACUCUGGCCUGGGCC-AGAACUGGAAUCU
+CCCCAGCAGCAAAAAAC-UUCUUGCGCCAAUUCGAAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG764559 Akabane virus strain URF-D4cot-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG764556 Akabane virus strain KMR-21Cl-TR2016 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595774 Akabane virus strain ANT-Clng21-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595773 Akabane virus strain KRK-Cs34J-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595772 Akabane virus strain KRK-Cs34E-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595771 Akabane virus strain KRK-Cs34I-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595768 Akabane virus strain ALT-6CKLOK-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595767 Akabane virus strain ALT-3CKLOK-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595766 Akabane virus strain ALT-10KLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595765 Akabane virus strain ALT-6KLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595763 Akabane virus strain CYR-S235LOK-TR2017 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595762 Akabane virus strain CYR-S230LOK-TR2017 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595761 Akabane virus strain ANT-S175LOK-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595760 Akabane virus strain ANT-S174LOK-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595759 Akabane virus strain SDG-S114LOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595758 Akabane virus strain ANT-S47LOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGCCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747542 Oropouche virus isolate BeAn 208402 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCGCUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUKGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAGU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAACUGUAGGCACUUUCGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUCUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>AY993910 Oropouche virus isolate BeAn 208402 nucleocapsid protein and non-structural protein mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCGCUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUKGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUUCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAGU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAACUGUAGGCACUUUCGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747584 Oropouche virus isolate PPS 523 H 669315 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUCCAACGAUGUACCA-CAUCGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGUCAAAAAACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUUGCAUAUAGUGGAGUACAGUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747578 Oropouche virus isolate BeH 543857 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAUAAAAUAUAAAACA
+CAAAAAAAAAAAAAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAAUAAAUAAAAAAA--------G------
+-UGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747536 Oropouche virus isolate BeAr 136921 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACU--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGCUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAAGAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470111 Oropouche virus strain BeAr136921 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACU--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGCUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830482 Oropouche virus isolate H759531 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAGGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AGUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCCGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830480 Oropouche virus isolate H759525 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAGGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830479 Oropouche virus isolate H758669 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAAUGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUACUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCGGGAUACUUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUGGUAG-UGCCUUUGGCAGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCGAUG
+UAUCUGGGGUUUGCUGCUGGUGCUGAGAUGUUUCUGCAG-ACA--UUCACUUUCUUUCCUUUGGUAAUUGAGAUGCACAG
+GGUCCUCAAGGACGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUUCGGCAGAGGUAUGGCCAGAAGACUGCUGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAGGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCCGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830471 Oropouche virus isolate H543857 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830469 Oropouche virus isolate H543639 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830468 Oropouche virus isolate H543638 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGAAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830443 Oropouche virus isolate AR136921 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAAUCGAAUCCAGUGCCGGACAACGGU
+CUUACCUUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACU--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGCUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>EF467369 Oropouche virus strain PPS 523 H 669315 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUCCAACGAUGUACCA-CAUCGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGUCAAAAAACUGCUGAACAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUUGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY704566 Oropouche virus strain BeH 543857 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY704564 Oropouche virus strain BeH 543638 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAG-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY704562 Oropouche virus strain BeH 543639 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAAGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY704561 Oropouche virus strain BeH 543745 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGAAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164548 Oropouche virus strain BeH543618 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGC---------AAGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164540 Oropouche virus strain BeH475248 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAACGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164538 Oropouche virus strain BeH472204 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGUCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164537 Oropouche virus strain BeH472200 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------GGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAACGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747518 Oropouche virus isolate BeH 421086 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAUCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUACAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUCCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAUAAAAUAUAAAACA
+CAAAAACAAAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAAA--------G------
+-UGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>AY704559 Oropouche virus strain BeH 521086 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAUCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUACAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUCCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747545 Oropouche virus isolate BeAn 208819 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAGU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUCUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747539 Oropouche virus isolate BeAn 206119 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCGCUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAGU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAACUGUAGGCACUUUCGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUCUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747530 Oropouche virus isolate BeH 29090 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUUGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----GGUUGACCUUACUU
+UUGGUCGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUGCCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GUUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGCACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUCGCUG-UUAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUCUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747527 Oropouche virus isolate BeH 29086 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUUGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----GGUCGACCUUACUU
+UUGGUCGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUGCCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GUUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGCACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUCAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUCGCUG-UUAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUCUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747524 Oropouche virus isolate BeAr 19886 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUUGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUGG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUGAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUCUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470109 Oropouche virus strain BeH29090 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUUGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----GGUUGACCUUACUU
+UUGGUCGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUGCCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GUUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGCACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUCGCUG-UUAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470108 Oropouche virus strain BeH29086 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUUGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----GGUCGACCUUACUU
+UUGGUCGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUGCCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GUUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGCACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUCAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUCGCUG-UUAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470107 Oropouche virus strain BeAr19886 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAAGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCCAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCCAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUUGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUGG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUGAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY993911 Oropouche virus isolate BeAn 208819 nucleocapsid protein and non-structural protein mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAGU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY993909 Oropouche virus isolate BeAn 206119 nucleocapsid protein and non-structural protein mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCGCUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAGU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAACUGUAGGCACUUUCGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164547 Oropouche virus strain BeH543087 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164545 Oropouche virus strain BeH543033 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAA-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747506 Oropouche virus isolate BeH 389865 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGAAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUACACCGUCUGUCCGGUUACCUAGCUCGCUGGGCAUUUACCCAC---AUGA----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUUGUAG-UGCCUUUGGCGGAGGUCAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGUUUUGCUGCAGGUGCUGAGAUGUUUCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGAAUGGAUGUCAACUUUAUGAAGAAAUUCCUCCGGCAGCGCUAUGGACAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUACUAGCUG-UAAAAGCAGCUUUUGAAUCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGCUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGCAAUUGGCAUAUAGUGGAGUACAAUAAGCAAAGAAAAUAUAAUAUA
+AAAUACAAAAAGAAAUAAAAUAACAAAAAUACAAAAACUAAAAAUAUAUAAAAUAAAUAAAAAG----------------
+---UGCGAAAGCACAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470103 Oropouche virus strain BeH389865 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGAAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUACACCGUCUGUCCGGUUACCUAGCUCGCUGGGCAUUUACCCAC---AUGA----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUUGUAG-UGCCUUUGGCGGAGGUCAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGUUUUGCUGCAGGUGCUGAGAUGUUUCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGAAUGGAUGUCAACUUUAUGAAGAAAUUCCUCCGGCAGCGCUAUGGACAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUACUAGCUG-UAAAAGCAGCUUUUGAAUCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGCUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGCAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830453 Oropouche virus isolate H389865 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGAAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUACACCGUCUGUCCGGUUACCUAGCUCGCUGGGCAUUUACCCAC---AUGA----GGUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUUGUAG-UGCCUUUGGCGGAGGUCAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGUUUUGCUGCAGGUGCUGAGAUGUUUCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUCCUCAAGGACGGAAUGGAUGUCAACUUUAUGAAGAAAUUCCUCCGGCAGCGCUAUGGACAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUACUAGCUG-UAAAAGCAGCUUUUGAAUCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGCUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGCAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF362398 Buttonwillow virus strain A7956 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------UGAGUUCAUCUUUAAUGAUGUACCU-CAACGGUCUAC
+AUCCACGUUUGACCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUCAGUACAGAGCA--NGCCUCAGCGUUAGUGUCGCUAG
+AAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUC-UACGUCAGACGUCACAACCAAA-----UGUCAAUCUUACUU
+UUGGCCAGUCAGUC-----UUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCAAAUCCGGUGCCAGAUAACGGU
+CUUACCCUGCACCGCCUCUCCGGUUACCUUGCGAGAUGGUUAAUGGAUCAG---AU-CAN--GGUUGGAGGUUCUGUACG
+AGAGGCAGAAAUUAGGGGAGCAAUAGUG-AUACCACUUGCAGAAAUAAAAGGCUGCACUUGGAAUGAUGGCAAUGCUAUG
+UAUUUGGCAUUUGCUGCUGGGACAGAAAUGUUUCUGCAG-ACA--UUUACAUUCUUCCCAUUAGCAAUUGAAAUGCAACG
+CGUGCUAAAAGAUGGAAUGGAUGUCAACUUCAUGAAGAAAGUAAUAAGGCAGAGAUAUGGGACACUAACUGCUGAGCAAU
+GGAUGAGACACGAGGUGACUGCAG-UCACAGCAGCAUUUAAUGCUGGUGGAUUGCUGCCUUGGGCU-AGAUCUGGAUUCU
+CUUCAAUGGCUAGAAAG-UUCUUGAGGAACUUUGGAAUUAAUAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747533 Oropouche virus isolate BeH 121923 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAGA-----AAUUCCAAUAA-------UGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUUGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----GGUUGACCUUACUU
+UUGGUCGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUGCCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GUUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGCACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUCGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAGUGGAGUACAAUAAACAAAUAAAAUAUAAAACA
+CAAAAAAACAACAAAAAAGAAAAUAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAA----UAAAUAAAAAAA
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUCUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470110 Oropouche virus strain BeH121923 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUUCAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUUGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGUGGCCCAU-----GGUUGACCUUACUU
+UUGGUCGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUGCCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GUUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGCACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUCGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGACAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830467 Oropouche virus isolate H543629 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY704560 Oropouche virus strain BeH 543733 structural nucleocapsid protein (N) and non-structural protein (NSs) mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCCUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGGAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AY993912 Oropouche virus isolate BeAn 208823 nucleocapsid protein and non-structural protein mRNAs, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------AAAGAGGAUCCAAUAAUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAGACUGCCGAGCGGU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAAUUCAC----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747509 Oropouche virus isolate BeH 390242 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUGCGAAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUACACCGUCUGUCCGGUUACCUAGCUCGCUGGGCAUUUACCCAC---AUGA----GAUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUUGUAG-UGCCUUUGGCGGAGGUCAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGUUUUGCUGCAGGUGCUGAGAUGUUUCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUGCUCAAGGACGGAAUGGAUGUCAACUUUAUGAAGAAAUUCCUCCGGCAGCGCUAUGGACAAAAGACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUACUAGCUG-UAAAAGCAGCUUUUGAAUCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGCUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGCAAUUGGCAUAUAGUGGAGUACAAUAAGCAAAGAAAAUAUAAUAUA
+AAAUACAAAAAGAAAUAAAAUAACAAAAAUACAAAAACUAAAAAUAUAUAAAAUAAAUAAAAAG----------------
+---UGCGAAAGCACAAAAAGAACUGCAGCUGUAAUAUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470104 Oropouche virus strain BeH390242 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUGCGAAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUACACCGUCUGUCCGGUUACCUAGCUCGCUGGGCAUUUACCCAC---AUGA----GAUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUUGUAG-UGCCUUUGGCGGAGGUCAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGUUUUGCUGCAGGUGCUGAGAUGUUUCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUGCUCAAGGACGGAAUGGAUGUCAACUUUAUGAAGAAAUUCCUCCGGCAGCGCUAUGGACAAAAGACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUACUAGCUG-UAAAAGCAGCUUUUGAAUCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGCUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGCAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830454 Oropouche virus isolate H390242 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUCC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUGCGAAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUGC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUACACCGUCUGUCCGGUUACCUAGCUCGCUGGGCAUUUACCCAC---AUGA----GAUCA-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUUGUAG-UGCCUUUGGCGGAGGUCAAGGGCUGUACUUGGAAUGAUGGUGAUGCAAUG
+UACCUGGGUUUUGCUGCAGGUGCUGAGAUGUUUCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCACAG
+GGUGCUCAAGGACGGAAUGGAUGUCAACUUUAUGAAGAAAUUCCUCCGGCAGCGCUAUGGACAAAAGACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUACUAGCUG-UAAAAGCAGCUUUUGAAUCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGCUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGCAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG764558 Akabane virus strain URF-G1cot-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGAUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUGACUGCAGAGGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG764557 Akabane virus strain URF-I2Pcot-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGAUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUGACUGCAGAGGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747557 Oropouche virus isolate BeH 532314 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCAUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAUAAAAUAUAAAACA
+CAAAAAAAGAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAA---------A------
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470122 Oropouche virus strain BeH532314 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCAUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470120 Oropouche virus strain BeH384193 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+GGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGAUUGAGAUGCAUAG
+GGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830461 Oropouche virus isolate H532314 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCAUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830451 Oropouche virus isolate H384193 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+GGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGAUUGAGAUGCAUAG
+GGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164544 Oropouche virus strain BeH541863 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAGCGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAACGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGGAAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF164539 Oropouche virus strain BeAr473358 small segment nucleoprotein gene, partial cds; and non-structural protein (NSs) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGGCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAU---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAAGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAAAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAAAAAAUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAAUUGCUG-UAAAAACAGCUUUUGAAACUGUAGGCACUCUGGCCUGGGCC-AUAACUGGAUUCU
+CCCCAGCAGCAAGAAAC-UUCUUGCGCCAAUUCGAAAUUGACAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595770 Akabane virus strain KRK-Cs34F-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGAUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCAUUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUGACUGCAGAGGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595769 Akabane virus strain KRK-Cs34G-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGAUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCAUUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUGACUGCAGAGGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG595764 Akabane virus strain ALT-1KLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------------------------AAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCGCUGGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGAUAUGCAAUG
+UACCUAGGAUUUGCCCCUGGUGCUGAAAUGUUUUUGGAA-ACC--UUCGAGUUUUACCCAUUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUCUUGCGCCAGAGAUACGGGCAGCUGACUGCAGAGGAGU
+GGAUGACAUCUAAGUUGGACGCAGU-------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF362400 Facey's Paddock virus strain Aus Ch 16129 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGAC---------UGACUUUGUGUUCAACGAUGUACCA-CAACGGGCUAC
+GUCUACGUUUGAUCCGGAGGCGGCAUAUGUGGCAUUUGAAAAUCGUUUCAGAGC--GAAUCUCACUGUUGAUGUCGCUCG
+AAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUCUUGC-UAAGACGGCGAGAGCAAC-----UGUUGAUAUUACGU
+UUGGAGGGGUCGUC-----UUUCCAGUGGUUAACAACCAUUAUCCAGAAUACCAACG-GAAUCCGGUGCCAGAUGACGGC
+CUUACCUUGCACAGGCUCUCUGGGUACCUGGCUAGAUGG---UUGAUCGAUC-AAUGCAAU--GCAAG---CCCUGUCCG
+GAUGACCGAGAUCAGGACAAAAGUGAUU-AUUCCUCUUGCAGAAGUGAAAGGUUGCACCUGGAAUGAUGGUGCAUCAAUG
+UACCUCGGAUUUGCUGCUGGAGCUGAAAUGUUUCUCCAGAGC---UUCACAUUCUAUCCUCUAGUGAUAGAAAUGCAGAG
+AGUCUUGAAGGAUGGAAUGGAUGUAAACUUUAUGCGCAAAGUAUUGCGCCAAAGAUAUGGGACCAAAACCGCAGAACAAU
+GGAUGAGAGAUGACAUCGUUGCAGUUAAAA-CUGCAUUUGAGGCCAUUAAUACAAUCUCAUGGGCC-AGAUCUGGAUUCU
+CUCCUGCUGCAAGAGAG-UUCUUGCGCCAAUUUGGCAUUAACAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG747563 Oropouche virus isolate BeH 532490 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGCCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAAGAUGGCAUGGAUGUUAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUCGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAUAAAAUAUAAAACA
+CAAAAAAAAAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAA---------A------
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747554 Oropouche virus isolate BeH 385591 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAUAAAAUAUAAAACA
+CAAAAACAAAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAA---------A------
+GUGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>MG747515 Oropouche virus isolate BeH 472435 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+GGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUGGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGAUUGAGAUGCAUAG
+GGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAUAAAAUAUAAAACA
+CAAAAACAAAAAAAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAAUAAAUAAAAAAA--------G------
+-UGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470124 Oropouche virus strain BeH532490 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGCCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAAGAUGGCAUGGAUGUUAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUCGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470121 Oropouche virus strain BeH385591 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470106 Oropouche virus strain BeH472435 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+GGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUGGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGAUUGAGAUGCAUAG
+GGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830463 Oropouche virus isolate H532490 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGCCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+ACAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAAGAUGGCAUGGAUGUUAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUCGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830456 Oropouche virus isolate H472435 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+GGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUGGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUCGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGAUUGAGAUGCAUAG
+GGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGCCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830452 Oropouche virus isolate H385591 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF697136 Facey's Paddock virus isolate Aus Ch 16129 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAUC-----------UCCGUAAUAAGAAAAUGAC---------UGACUUUGUGUUCAACGAUGUACCA-CAACGGGCUAC
+GUCUACGUUUGAUCCGGAGGCGGCAUAUGUGGCAUUUGAAAAUCGUUUCAGAGC--GAAUCUCACUGUUGAUGUCGCUCG
+AAUUUUCUUCCUCAACCAGAAGAAGGCCAAGGAUCGUCUUGC-UAAGACGGCGAGAGCAAC-----UGUUGAUAUUACGU
+UUGGAGGGGUCGUC-----UUUCCAGUGGUUAACAACCAUUAUCCAGAAUACCAACG-GAAUCCGGUGCCAGAUGACGGC
+CUUACCUUGCACAGGCUCUCUGGGUACCUGGCUAGAUGG---UUGAUCGAUC-AAUGCAAU--GCAAG---CCCUGUCCG
+GAUGACCGAGAUCAGGACAAAAGUGAUU-AUUCCUCUUGCAGAAGUGAAAGGUUGCACCUGGAAUGAUGGUGCAUCAAUG
+UACCUCGGAUUUGCUGCUGGAGCUGAAAUGUUUCUCCAGAGC---UUCACAUUCUAUCCUCUAGUGAUAGAAAUGCAGAG
+AGUCUUGAAGGAUGGAAUGGAUGUAAACUUUAUGCGCAAAGUAUUGCGCCAAAGAUAUGGGACCAAAACCGCAGAACAAU
+GGAUGAGAGAUGACAUCGUUGCAGUUAAAA-CUGCAUUUGAGGCCAUCAAUACAAUCUCAUGGGCC-AGAUCUGGAUUCU
+CUCCUGCUGCAAGAGAG-UUCUUGCGCCAAUUUGGCAUUAACAUCUAAA--------------ACAUCUAGGAGAUGUUC
+AAAAAAUAUAAAAAAUAAAAAAACAAAAUAAAAAUAAUAAAAACAAAAAAACACAAAAAAAUAA-----------AAGUA
+CUUGGCUUUGCCAAGUACUUAAAAUCAGCUGCUGAGCUCCGGCUUGGGUGGUUGGGGCAAAGUGCUAAUUUAAGGCAUUG
+UAAUUAUUAUUGAAUUGGGAGCACACUACUNGNGNANNCNCAAUA-----
+>MG747560 Oropouche virus isolate BeH 532422 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCCUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CGCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAUAAAAUAUAAAACA
+CAAAAACAGAAAAAAAAUAACAAAAAUACAAAAAAAUUAAAAAAUAUAUAAAAUAAAUAAAAAAA--------G------
+-UGCGAAAGCACAAAAAAAGAACUGCAGCUGUGAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470123 Oropouche virus strain BeH532422 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCCUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CGCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470119 Oropouche virus strain BeH384192 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+GGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGAUUGAGAUGCAUAG
+GGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470101 Oropouche virus strain BeH543091 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830465 Oropouche virus isolate H543091 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+GCAAGCUGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830462 Oropouche virus isolate H532422 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCAUAUGUGUCCUUUGAAGCGAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CGCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830450 Oropouche virus isolate H384192 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCAGCUUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+GGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUCAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGACUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GCUCA-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUAGUGAUUGAGAUGCAUAG
+GGUUCUGAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGUGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGGACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470118 Oropouche virus strain BeH366781 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUAGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830449 Oropouche virus isolate H366781 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGGUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUAGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>NC_043590 Ingwavuma virus isolate SA An 4165 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAAACU
+UAAAGUUCUUUAAUAUU-----A-------UGGC------UGAAGCGAUAGUUUUCAAUGAUGUACCU-CAACGGACUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUGUUAACACCGCUCG
+AAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCCAC-----UGUCAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCAAAUCCGGUUGAUGAUUCAGCC
+CUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGGUGAUGAC--AUUUUAUGC-----UCAAA--GCCCAGUCAA
+CCAGGCUGCUGUGCGUGAGGCAGUUGUG-AUACCUCUGGCUGAGGUCAAGGGUUGCUCAUGGAAUGAUGGGCCUGCACUU
+UAUCUUGGAUUUGCUGCAGGUGCAGAAAUGUUUCUGCAA-ACC--UUCACCUUUUUCCCUCUGGUGAUUGAGAUGCACCG
+UGUUUUGAAAGAUGGCAUGGAAGUAAAUUUCAUGAGGAAGGUUCUGCGCCAACGUUAUGGAGCUCUGACUGCAGAACAAU
+GGAUGAGGCAGGAGAUUGUGGCUA-UCAGGGCUGCAUUUGAUGCUGUCGGUGCAUUGCCUUGGGCU-AAGAGUGGGUUCU
+CUCCUCUUGCUAGGGAG-UUCCUUGCCCAGUUUGGCAUCAAAAUUUAAA-----AUAUUCAUUAUCAAAAUUAUUAACCA
+AAAAUAUACAAAAAUACAAAAAAAGAAAUAAAAUAUAUAAAAAAACCCCAAAAAAACUAUAAAAAACAAAAAAACAAAAA
+AAUAGUAGUACUUAGCUUAGCUAAGUACUACAAUAUAAGCAGCUGCUAAAGUCUUUAAAUAUACCUAUAUCAGUUUAUAA
+UACUUGCUGUUUAAUCAUCUUUGAAUUGGGAGCACACUACU---------
+>KF697141 Ingwavuma virus isolate SA An 4165 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAAACU
+UAAAGUUCUUUAAUAUU-----A-------UGGC------UGAAGCGAUAGUUUUCAAUGAUGUACCU-CAACGGACUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUGUUAACACCGCUCG
+AAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCCAC-----UGUCAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCAAAUCCGGUUGAUGAUUCAGCC
+CUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGGUGAUGAC--AUUUUAUGC-----UCAAA--GCCCAGUCAA
+CCAGGCUGCUGUGCGUGAGGCAGUUGUG-AUACCUCUGGCUGAGGUCAAGGGUUGCUCAUGGAAUGAUGGGCCUGCACUU
+UAUCUUGGAUUUGCUGCAGGUGCAGAAAUGUUUCUGCAA-ACC--UUCACCUUUUUCCCUCUGGUGAUUGAGAUGCACCG
+UGUUUUGAAAGAUGGCAUGGAAGUAAAUUUCAUGAGGAAGGUUCUGCGCCAACGUUAUGGAGCUCUGACUGCAGAACAAU
+GGAUGAGGCAGGAGAUUGUGGCUA-UCAGGGCUGCAUUUGAUGCUGUCGGUGCAUUGCCUUGGGCU-AAGAGUGGGUUCU
+CUCCUCUUGCUAGGGAG-UUCCUUGCCCAGUUUGGCAUCAAAAUUUAAA-----AUAUUCAUUAUCAAAAUUAUUAACCA
+AAAAUAUACAAAAAUACAAAAAAAGAAAUAAAAUAUAUAAAAAAACCCCAAAAAAACUAUAAAAAACAAAAAAACAAAAA
+AAUAGUAGUACUUAGCUUAGCUAAGUACUACAAUAUAAGCAGCUGCUAAAGUCUUUAAAUAUACCUAUAUCAGUUUAUAA
+UACUUGCUGUUUAAUCAUCUUUGAAUUGGGAGCACACUACU---------
+>MG747566 Oropouche virus isolate BeH 532500 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAACAU
+AAAAAG------AAAUUCCAAUA------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+GCAAGCAGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGCUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAGUGGAGUACAGCAAACAAAUAAAAUAUAAAACA
+CAAAAAAAAAAAAAAAAUAACAAAAAUACAAAAAAAAUAAAAAAUAUAUAAAAUAAAUAAAAAAA--------G------
+-UGCGAAAGCACAAAAAAAGAACUGCAGCUGUAAUGUUAUAAAGGGUUGGGUGGUUGGGGAAAGCUAUGUCAUUUUAGAA
+AACGUAUUUUUGAAUUGGGAGCACACUACU--------------------
+>HM470125 Oropouche virus strain BeH532500 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+GCAAGCAGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGCUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830464 Oropouche virus isolate H532500 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUCUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGCAAGACAUCGAGGCCCAU-----GGUUGACCUCACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCU-----CCAAUUAA
+GCAAGCAGAGUUUAGGGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUCCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUAAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGCUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUAGUUGCUG-UAAGAGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUGCGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH999476 Manzanilla orthobunyavirus strain Ingwavuma#2BHK_02:02:96 nucleocapsid protein and NSs genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------UGAAGCGAUAGUUUUCAAUGAUGUACCU-CAACGGACUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUGUUAACACCGCUCG
+AAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCCAC-----UGUCAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCAAAUCCGGUUGAUGAUUCAGCC
+CUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGGUGAUGAC--AUUUUAUGC-----UCAAA--GCCCAGUCAA
+CCAGGCUGCUGUGCGUGAGGCAGUUGUG-AUACCUCUGGCUGAGGCCAAGGGUUGCUCAUGGAAUGAUGGGCCUGCACUU
+UAUCUUGGAUUUGCUGCAGGUGCAGAAAUGUUUCUGCAA-ACC--UUCACCUUUUUCCCUCUGGUGAUUGAGAUGCACCG
+UGUUUUGAAAGAUGGCAUGGAAGUAAAUUUCAUGAGGAAGGUUCUGCGCCAACGUUAUGGAGCUCUGACUGCAGAACAAU
+GGAUGAGGCAGGAGAUUGUGGCUA-UCAGGGCUGCAUUUGAUGCUGUCGGUGCAUUGCCUUGGGCU-AAGAGUGGGUUCU
+CUCCUCUUGCUAGGGAG-UUCCUUGCCCAGUUUGGCAUCAAAAUUUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF362395 Ingwavuma virus strain An4165 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACUAUUCAAAAACU
+UAAAGUUCUUUAAUAUU-----A-------UGGC------UGAAGCGAUAGUUUUCAAUGAUGUACCU-CAACGGACUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUGUUAACACCGCUCG
+AAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCCAC-----UGUCAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCAAAUCCGGUUGAUGAUUCAGCC
+CUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGGUAAUGAC--AUUUUAUGC-----UCAAA--GCCCAGUCAA
+CCAGGCUGCUGUGCGUGAGGCAGUUGUG-AUACCUCUGGCUGAGGUCAAGGGUUGCUCAUGGAAUGAUGGGCCUGCACUU
+UAUCUUGGAUUUGCUGCAGGUGCAGAAAUGUUUCUGCAA-ACC--UUCACCUUUUUCCCUCUGGUGAUUGAGAUGCACCG
+UGUUUUGAAAGAUGGCAUGGAAGUAAAUUUCAUGAGGAAGGUUCUGCGCCAACGUUAUGGAGCUCUGACUGCAGAACAAU
+GGAUGAGGCAGGAGAUUGUGGCUA-UCAGGGCUGCAUUUGAUGCUGUCGGUGCAUUGCCUUGGGCU-AAGAGUGGGUUCU
+UUCCUUUUGCUAGGGAG-UUCCUUGCCCAGUUUGGCAUCAAAAUUUAAAAUAUU------CAUUAUCAAAAUUAUUAACC
+AAAAAUAUACAAAAAUACAAAAAAGAAAUAAAAUAUAUAAAAAAACCCCAAAAAAACUAUAAAAAACAAAAAAACAAAAA
+AAUAGUAGUACUUAGCUUAGCUAAGUACUACAAUAUAAGCAGCUGCUAAAGUCUUUAAAUAUACCUAUAUCAGUUUAUAA
+UACUUGCUGUUUAAUCAUCUUUGAAUGUGGAGCCACACUACU--------
+>LC113954 Akabane virus N, NSs genes for nucleocapsid, non-structural protein, partial cds, strain: WJ-1SA/P/2014
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------------------------------CUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCCGCUAGCUGAGGUGAAGGGUUGCACCUGGAGUGAUGGGUAUGCAAUG
+UACUUAGGAUUUGCCCCUGGUGCUGAGAUGUUUUUGGAA-ACC--UUCGAGUUUUAUCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGGAUGGAUGUCAACUUCAUGAGGAAGGUUUUGCGCCAGAGAUACGGGCAGCUGACUGCAGAGGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUAGCUCAGUUGCCCAGAUAUCC--------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM470116 Oropouche virus strain BeH356898 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCCAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCC-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUAGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUCGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUACGCCAAUUCGGAAUUGGCAUA-----------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ830447 Oropouche virus isolate H356898 nucleoprotein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUC---------AGAGUUCAUUUUCAACGAUGUACCA-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGGCCGCAUAUGUGUCAUUUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUCGUUAG
+AGUCUUCUUCCUUAACCAAAAGAAGGCCAAGGAU-GUCUUACGGAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCCAAUCCAGUCCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCUCGCUGGGCCUUUACCCAG---AUGC----GGUCC-----CCAAUUAA
+GCAAGCUGAGUUUAGAGCCACUGUAGUAG-UGCCUUUAGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUAGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAAGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGAUAUGGCCAAAAAACUGCCGAGCAAU
+GGAUGCGCGAAGAAAUCGUUGCUG-UAAGGGCAGCUUUUGAAGCUGUAGGCACUCUGGCCUGGGCC-AGAACUGGAUUCU
+CCCCAGCAGCAAGAGAC-UUCUUACGCCAAUUCGGAAUUGGCAUAUAG--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH507153 Cat Que virus strain JM1 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------GUAGUGUACUCCACAAUUCAAAAACU
+UAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGAGCA--AACCUCACUGUUAACACCGCUCG
+AGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCC
+CUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUGACCUUC--UAUGC------CCAGA-GCCCAGUUAA
+CCAGGCAGCUGUCCGUGAGGCAGUUAUU-AUUCCCCUGGCUGAGGUCAAGGGUUGUUCGUGGGAUGAUGGGCCUGCCCUU
+UACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUUUACAA-ACA--UUUACUUUUUUUCCACUUGUGAUUGAGAUGCACCG
+CGUACUGAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUUCUGCGCCAAAGGUAUGGUGCACUGACUGCAGAACAAU
+GGAUGAGGCAAGAAAUAGUGGCAA-UUAAGGCAGCAUUUGAGGCUGUUGGUGCACUUCCUUGGGCA-AGAACUGGAUUCU
+CACCAGCUGCCAGGGAA-UUCCUUGCCCAAUUCGGAAUCCGCAUCUAAAUCAGAAAAAGCCCCAUAGUUGGAGUACCGAU
+AAAAUAAAUAAAAAUACAAAAAAAUACAUAAAAUAAUAAAAUGAAAUAAAAAAUAUAAAAUAAUAAAAAUAAAAAAAAUA
+UAGUAGUACUUGGACUAGCCAAGUACUACGACAAUAGCAGCUGCUAAUGUUAUUGUAAGUCCUCUACUUUAGUUUAUAAU
+AAGGUCUGUAUAAUCAUCUUUGAAUUGGGAGCACAC--------------
+>MH484317 Oya virus strain VN04-2108 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------------------------------------UAGUGUACUCCACAAUUCAAAAACU
+UAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGGGCA--AACCUCACUGUUAACACCGCUCG
+AGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCC
+CUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGG-------CUGAUGACUUUCUAU--GCCCAGAGCCCAGUCAA
+CCAGGCAGCUGUCCGUGAGGCAGUUAUC-AUUCCCCUGGCUGAGGUUAAGGGUUGUUCAUGGGAUGAUGGACCUGCCCUC
+UACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUCUGCAG-ACA--UUUACUUUUUUUCCACUUGUGAUUGAGAUGCACCG
+CGUACUGAAAGAUGGGAUGGAUGUCAACUUUAUGAGAAAAGUUCUGCGCCAACGAUAUGGCGCACUGACUGCAGAACAAU
+GGAUGAGGCAGGAGAUAGUGGCAA-UUAGGGCAGCAUUUGAGGCUGUUGGCGCACUUCCUUGGGCA-AGAACUGGAUUCU
+CGCCAGCUGCCAGGGAA-UUCCUUGCUCAAUUUGGAAUCCGUAUCUAAAUCAAAAAAAGCCCCCGUAGUUGGAGUACCGA
+UAAAAUAAAUAAAAACACAAAAAAAUACAUAAAAUAAUAAAACAAAAUAAAAAAUAUAAAAAUAAUAAAAACAAAAAUAA
+AAAUAUAGUAGUACUUGGACUAGCCGAGUACUACAACAAUAGCAGCUGCUAAUGUCGUUGUAAGUUCUCCACUUCAAUUU
+AUAAUAAGGUCUGUAUAAUCAUCUUUGAAUUGGGAGC-------------
+>KY795950 Oya virus isolate NIV86209 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAAACU
+UAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGAGCA--AACCUCACUGUUAACACCGCUCG
+AGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCC
+CUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUGACCUUC--UAUGC------CCAGA-GCCCAGUUAA
+CCAGGCAGCUGUCCGUGAGGCAGUUAUU-AUUCCCCUGGCUGAGGUCAAGGGUUGUUCGUGGGAUGAUGGGCCUGCCCUU
+UACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUUUACAG-ACA--UUUACUUUUUUUCCACUUGUGAUUGAGAUGCACCG
+CGUACUGAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUUCUGCGCCAAAGGUAUGGUGCACUGACUGCAGAACAAU
+GGAUGAGGCAGGAGAUAGUGGCAA-UUAGGGCAGCAUUUGAGGCUGUUGGUGCACUUCCUUGGGCA-AGAACUGGAUUCU
+CACCAGCUGCCAGGGAA-UUCCUUGCCCAAUUCGGAAUCCGCAUCUAAAUCAGAAAAAGCCCCA----UAGUUGGAGUAC
+CGAUAAAAUAAAUAAAAACACAAAAAAAUACAUAAAAUAAUAAAACAAAAUAAAAAAUAUAAAAAUAAUAAAAAACAAAA
+AUAAAAAAUAUAGUAGUACUUGGACUAGCCGAGUACUACGACAAUAGCAGCUGCUAAUGUCAUUGUAAGUUCUCUACUUU
+AGUUUAUAAUAAGGUCUGUAUAAUCAUCUUUGAAUUGGGAGCACACUACU
+>JQ675600 Cat Que Virus strain VN04-2108 nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAAACU
+UAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGGGCA--AACCUCACUGUUAACACCGCUCG
+AGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCC
+CUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGG-------CUGAUGACUUUCUAU--GCCCAGAGCCCAGUCAA
+CCAGGCAGCUGUCCGUGAGGCAGUUAUC-AUUCCCCUGGCUGAGGUUAAGGGUUGUUCAUGGGAUGAUGGACCUGCCCUC
+UACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUCUGCAG-ACA--UUUACUUUUUUUCCACUUGUGAUUGAGAUGCACCG
+CGUACUGAAAGAUGGGAUGGAUGUCAACUUUAUGAGAAAAGUUCUGCGCCAACGAUAUGGCGCACUGACUGCAGAACAAU
+GGAUGAGGCAGGAGAUAGUGGCAA-UUAGGGCAGCAUUUGAGGCUGUUGGCGCACUUCCUUGGGCA-AGAACUGGAUUCU
+CGCCAGCUGCCAGGGAA-UUCCUUGCUCAAUUUGGAAUCCGUAUCUAAAUCAAAAAAAGCCCCCGUAGUUGGAGUACCGA
+UAAAAUAAAUAAAAACACAAAAAAAUACAUAAAAUAAUAAAACAAAAUAAAAAAUAUAAAAAUAAUAAAAACAAAAAUAA
+AAAUAUAGUAGUACUUGGACUAGCCGAGUACUACAACAAUAGCAGCUGCUAAUGUCGUUGUAAGUUCUCCACUUCAAUUU
+AUAAUAAGGUCUGUAUAAUCAUCUUUGAAUUGGGAGCACACUACU-----
+>JX983192 Oya virus strain SC0806 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAAACU
+UAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGGGCA--AACCUCACUGUUAACACCGCUCG
+AGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCC
+CUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUGACUUUC--UAUGC------CCAGA-GCCCAGUCAA
+CCAGGCAGCUGUCCGUGAGGCAGUUAUC-AUUCCCCUGGCUGAGGUUAAGGGUUGUUCAUGGGAUGAUGGACCUGCCCUC
+UACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUCUGCAG-ACA--UUUACUUUUUUCCCACUUGUGAUUGAGAUGCACCG
+CGUACUGAAAGAUGGGAUGGAUGUCAACUUUAUGAGAAAAGUUCUGCGCCAACGAUAUGGCGCACUGACUGCAGAACAAU
+GGAUGAGGCAGGAGAUAGUGGCAA-UUAGGGCAGCAUUUGAGGCUGUUGGCGCACUCCCUUGGGCA-AGAACUGGAUUCU
+CGCCAGCUGCCAGGGAA-UUCCUUGCUCAAUUUGGAAUCCGUAUCUAAA----UCAAAAAAAGCCCCGUAGUUGGAGUAC
+CGAUAAAAUAAAUAAAAACACAAAAAAAUACAUAAAAUAAUAAAACAAAAUAAAAAAUAUAAAAAUAAUAAAAAACAAAA
+AUAAAAAAUAUAGUAGUACUUGGACUAGCCGAGUACUACAACAAUAGCAGCUGCUAAUGUCGUUGUAAGUUCUCUACUUC
+AAUUUAUAAUAAGGUCUGUAUAAUCAUCUUUGAAUUGGGAGCACACUACU
+>JQ029991 Ingwavuma virus strain NIV86627 nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACUAUUCAAAAACU
+UAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGAGCA--AACCUCACUGUUAACACCGCUCG
+AGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCC
+CUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUGACCUUC--UAUGC------CCAGA-GCCCAGUUAA
+CCAGGCAGCUGUCCGUGAGGCAGUUAUU-AUUCCCCUGGCUGAGGUCAAGGGUUGUUCGUGGGAUGAUGGGCCUGCCCUU
+UACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUUUACAA-ACA--UUUACUUUUUUUCCACUUGUGAUUGAGAUGCACCG
+CGUACUGAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUUCUGCGCCAAAGGUAUGGUGCACUGACUGCAGAACAAU
+GGAUGAGGCAAGAAAUAGUGGCAA-UUAAGGCAGCAUUUGAGGCUGUUGGUGCACUUCCUUGGGCA-AGAACUGGAUUCU
+CACCAGCUGCCAGGGAA-UUCCUUGCCCAAUUCGGAAUCCGCAUCUAAAUCAGAAAAAGCCCCAUAGUUGGAGUACCGAU
+AAAAUAAAUAAAAAUACAAAAAAAUACAUAAAAUAAUAAAAUGAAAUAAAAAAUAUAAAAUAAUAAAAAUAAAAAAAAUA
+UAGUAGUACUUGGACUAGCCAAGUACUACGACAAUAGCAGCUGCUAAUGUUAUUGUAAGUCCUCUACUUUAGUUUAUAAU
+AAGGUCUGUAUAAUCAUCUUUGAAUGUGGAGCCACAC-------------
+>JQ029990 Ingwavuma virus strain NIV86208 nucleocapsid protein (N) gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACUAUUCAAAAACU
+UAAAGUCCUUUAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACCU-CAGCGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGAGCA--AACCUCACUGUUAACACCGCUCG
+AGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCC
+CUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUGACCUUC--UAUGC------CCAGA-GCCCAGUUAA
+CCAGGCAGCUGUCCGUGAGGCAGUUAUU-AUUCCCCUGGCUGAGGUCAAGGGUUGUUCGUGGGAUGAUGGGCCUGCCCUU
+UACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUUUACAA-ACA--UUUACUUUUUUUCCACUUGUGAUUGAGAUGCACCG
+CGUACUGAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUUCUGCGCCAAAGGUAUGGUGCACUGACUGCAGAACAAU
+GGAUGAGGCAAGAAAUAGUGGCAA-UUAAGGCAGCAUUUGAGGCUGUUGGUGCACUUCCUUGGGCA-AGAACUGGAUUCU
+CACCAGCUGCCAGGGAA-UUCCUUGCCCAAUUCGGAAUCCGCAUCUAAAUCAGAAAAAGCCCCAUAGUUGGAGUAC--CG
+AUAAAAUAAAUAAAAAUACAAAAAAAUACAUAAAAUAAUAAAAUGAAAUAAAAAAUAUAAAAUAAUAAAAAUAAAAAAAA
+UAUAGUAGUACUUGGACUAGCCAAGUACUACGACAAUAGCAGCUGCUAAUGUUAUGUAAGUCCUCUACUUUAGUUUAUAA
+UACUUGCUGUUUUAAUCAUCA-----------------------------
+>KP016014 Manzanilla virus strain DHL10M107 segment S nucleoprotein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------AGAUGCGAUAGUUUUCAACGAUGUACCU-CAGCGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGCAUUUGAAAAUACAUACAGGGCA--AACCUCACUGUUAACACCGCUCG
+AGUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAGUCGAAUCCGGUUAACGAUACAGCC
+CUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUGACUUUC--UAUGC------CCAGA-GCCCAGUCAA
+CCAGGCAGCUGUCCGUGAGGCAGUUAUU-AUUCCCCUGGCUGAGGUUAAGGGUUGUUCAUGGGAUGAUGGGCCUGCCCUC
+UACCUUGGAUUUGCUGCAGGUGCAGAGAUGUUUCUGCAG-ACA--UUUACUUUUUUCCCACUUGUGAUUGAGAUGCACCG
+CGUACUGAAAGAUGGGAUGGAUGUCAACUUUAUGAGAAAAGUUCUGCGCCAACGAUAUGGUGCACUGACUGCAGAACAAU
+GGAUGAGGCAGGAGAUAGUGGCAA-UUAGGGCAGCAUUUGAGGCUGUCGGCGCACUUCCUUGGGCA-AGAACUGGAUUCU
+CGCCAGCUGCCAGGGAA-UUCCUUGCUCAAUUCGGAAUCCGUAUCUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>DQ993248 Akabane virus strain 93 FMX S protein mRNA, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------UGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUUCACCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCCACUGGCUGAGGUGAAGGGUUGCACUUGGAGUGACGGGUAUGCAAUG
+UACCUGGGAUUUGCCCCUGGUGCUGAGAUGUUUCUGGAA-ACC--UUUGAGUUUUACCCACUGGUUAUCGACAUGCACCG
+UGUGAUAAAGGAUGGAAUGGAUGUCAACUUCAUGAGGAAGGUCUUACGUCAGAGGUAUGGGCAGCUGACUGCAGAAGAGU
+GGAUGACAUCUAAGUUGGACGCAG-UCAAGGCUGCAUUUGGCUCAGUUGCCCAAAUAU----------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF314813 Schmallenberg virus strain NO/13/04/7678 segment S nucleocapsid protein and non-structural protein genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------UCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAAUAU-GUCUCAAAUCCUGUGCCAGACAAUGCC
+AUUACACUUCACAGGAUGUCAGGAUAUCUAGCACGUUGGA---UUGCUGAUA-CAUGCAA--GGCUAGU-GUCC--UCAA
+ACUAGCAGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGAUGACUCAGAAAAUAACAGAAA-UAAAAGCUGCUUUUAAUUCUGUUGGACAGCUUGCCUGGGCU-AAAUCUG------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF697148 Manzanilla virus isolate TRVL 3586 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCACAAUUCAAAAACU
+UUAAAUCCUUGAAUAGU-----A-------UGGC------AGAUGCGAUAGUUUUCAAUGAUGUACCU-CAACGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUAUUAACACCGCUAG
+AAUAUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAC-----UGUCAAUCUUACUU
+UUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUCCCACAAUUC-CAGUCAAAUCCGGUUAGUGAUACAGCC
+CUUACCUUGCACCGCCUCUCUGGAUACCUUGCGAGAUGG----UUAAUGAC---AUUCUAU-GCCCAAA-GCCCUGUCAA
+UCAGGCUGCUGUUAGAGAAGCAGUAAUU-AUUCCUCUGGCAGAAGUUAAAGGCUGUUCAUGGGAUGAUGGGCCUGCACUC
+UAUCUUGGCUUUGCUUCAGGUGCGGAGAUGUUCUUGCAA-ACA--UUUACUUUCUUUCCCCUAGUCAUCGAAAUGCAUAG
+GGUGUUAAAAGAUGGUAUGGAUGUAAACUUCAUGAGAAAAGUUCUCCGCCAACGCUAUGGGGCCUUAACUGCUGAGCAAU
+GGAUGAGGCAAGAACUGGUUUCAA-UUCGUGCUGCAUUUGAUGCUGUUGGUGCCUUGCCAUGGGCC-CGAACUGGAUUCU
+CCCCUGCUGCUAGGGAG-UUCCUCGCUCAAUUUGGUAUUCGCAUCUAAAUAUGUGGAGCACAACCUGAAUAAAAUACAUA
+AUAAAUAAAAUGUAAAAAAUAUAUAAAAAAAGUAUAAAAUAUAUAAAAACACAAAAAAACAAAAAAUAAAACAAAAAACA
+AAAAAAUAGUAGUACUUAGGAUAGCUAAGUACUACAACAUUAGCAGCUGCUGACAUUCUUGAAUCACCCAAGUUAAUUUA
+UAUUAUUUUCUUUUUAAUCAUCUUUGAAUUGGGAGCACACUACU------
+>NC_043596 Utinga virus isolate Be An 84785 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCGCAAUUUCAAAACA
+AAAAAG------AAUUUAUAAAA------AUGGC---------AGAAUUUGUAUUUAAUGAUGUCCCC-CAGAGGUCUAC
+AUCAACAUUUGACCCAGAGGUGGCCUAUGCUACUUUUGAAGC--AGCAUUUCGCCAGACUCUAAAUGUCAAUGUUGUUAG
+AGUGUUCUUUUUAAACCAAAAGAAUGCUAAAAAU-GUUUUGAGAAAAACCUCAAGACCAAA-----UGUGGACUUGACAU
+UUGGGGG-----UGCAACCUUUCCAAUUGUCAACAACCAUUUUCCUCAAUUU-CAAUCAAAUCCAGUCCCUGACAACGGA
+CUCACUCUCCAUAGAUUGUCAGGCUAUUUAGCUAGAUGGUC---UAUGGAUCAAAUGCGAA---CCAA---CCCAAUUCG
+UCAAGCUGAAUUUAGGGCUGCUGUAGUAG-UCCCUCUUGCUGAAAUUAAGGGGUGCACUUGGAAUGAUGGUGAUGCUAUG
+UACUUAGCCUUUGCUGCAGGAGCUGAAAUGUUUUU--AA-ACACCUUUACUUUUUUCCCGCUGGUUAUUGAGAUGCACAG
+AGUCCUCAAGGAUGGCAUGGAUGUUAAUUUCAUGAGGAAAGUACUAAGACAAAGAUAUGGGACAAAAACAGCUGAGCAAU
+GGAUGAAGGACGAAAUUAUCCCAA-UCAAGGCAGCCUUUGAAGCUGUUGGUAUGCUGAGCUGGGCU-AGAACUGGAUUCU
+CUCCUGCUGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUCAAUGUCUAAAAAAAGACAUUAC---AAAUUAAAAUAAAAUA
+UAAAAAAAUACAAAAAAAUAAUAAAAAAUAUAAAAAUACAAAAAAAGCACCUUAGGGUGCAAAAGAUUAGCUGCUUAAGG
+GUUGGGUGGUUGGGGACUUAACAAAUCAGCUCAUUGUAUUUAYUUUGAAAUUGGGAGCACACUACU--------------
+--------------------------------------------------
+>KF697156 Utinga virus isolate Be An 84785 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCGCAAUUUCAAAACA
+AAAAAG------AAUUUAUAAAA------AUGGC---------AGAAUUUGUAUUUAAUGAUGUCCCC-CAGAGGUCUAC
+AUCAACAUUUGACCCAGAGGUGGCCUAUGCUACUUUUGAAGC--AGCAUUUCGCCAGACUCUAAAUGUCAAUGUUGUUAG
+AGUGUUCUUUUUAAACCAAAAGAAUGCUAAAAAU-GUUUUGAGAAAAACCUCAAGACCAAA-----UGUGGACUUGACAU
+UUGGGGG-----UGCAACCUUUCCAAUUGUCAACAACCAUUUUCCUCAAUUU-CAAUCAAAUCCAGUCCCUGACAACGGA
+CUCACUCUCCAUAGAUUGUCAGGCUAUUUAGCUAGAUGGUC---UAUGGAUCAAAUGCGAA---CCAA---CCCAAUUCG
+UCAAGCUGAAUUUAGGGCUGCUGUAGUAG-UCCCUCUUGCUGAAAUUAAGGGGUGCACUUGGAAUGAUGGUGAUGCUAUG
+UACUUAGCCUUUGCUGCAGGAGCUGAAAUGUUUUU--AA-ACACCUUUACUUUUUUCCCGCUGGUUAUUGAGAUGCACAG
+AGUCCUCAAGGAUGGCAUGGAUGUUAAUUUCAUGAGGAAAGUACUAAGACAAAGAUAUGGGACAAAAACAGCUGAGCAAU
+GGAUGAAGGACGAAAUUAUCCCAA-UCAAGGCAGCCUUUGAAGCUGUUGGUAUGCUGAGCUGGGCU-AGAACUGGAUUCU
+CUCCUGCUGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUCAAUGUCUAAAAAAAGACAUUAC---AAAUUAAAAUAAAAUA
+UAAAAAAAUACAAAAAAAUAAUAAAAAAUAUAAAAAUACAAAAAAAGCACCUUAGGGUGCAAAAGAUUAGCUGCUUAAGG
+GUUGGGUGGUUGGGGACUUAACAAAUCAGCUCAUUGUAUUUAYUUUGAAAUUGGGAGCACACUACU--------------
+--------------------------------------------------
+>MF083647 Aino virus isolate TN-1/AI/M/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAGGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGGAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACACUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083625 Aino virus isolate YL-8/AI/M/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACGUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083634 Aino virus isolate TN-2/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGGUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCCGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ610139 Shuni virus isolate SAE2710 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---UCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGUUGACCAUG
+UAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGCCAACGCUAUGGGACAUUGACUGCAGAACAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUCU-----------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083646 Aino virus isolate YL-8/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGCGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAG-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083645 Aino virus isolate YL-7/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083642 Aino virus isolate PT-1/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083641 Aino virus isolate TN-9/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083640 Aino virus isolate TN-8/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083638 Aino virus isolate TN-6/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083637 Aino virus isolate TN-5/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083636 Aino virus isolate TN-4/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083635 Aino virus isolate TN-3/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083631 Aino virus isolate YL-5/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083630 Aino virus isolate YL-4/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083629 Aino virus isolate YL-3/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083628 Aino virus isolate YL-2/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UCGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083627 Aino virus isolate YL-1/AI/C/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083624 Aino virus isolate YL-7/AI/M/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAGGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGGAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083621 Aino virus isolate YL-4/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083620 Aino virus isolate YL-3/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083619 Aino virus isolate YL-2/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ610137 Shuni virus isolate SAE1809 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGAUC-AAUGCAAA--ACAAA---UCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGUUGACCAUG
+UAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUCCUUCGCCAACGCUAUGGGACAUUGACUGCAGAACAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUC-----------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH507156 Balagodu virus strain PB1 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------AAAACUUAAAGUCCUUUAAUAGUAUGGC------UGAAGCGAUUGUUUUCAAUGAUGUACCU-CAACGGGCUCA
+AUCUACAUUUGAUCCGGAGGCGCAAUAUGUGGCAUUUGAAAAUACAUACCGAGCA--AACCUCACUGUUAACACCGCUCG
+AAUUUUCUUCCUCAAUCAGAAGAGAGCCAAAGAUACUC-UACGUCAGACGCCGAGGCCCAA-----UGUCAAUCUUACUU
+UUGGGCAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCAAAUCCGGUUGCUGAUACAGCC
+CUUACCCUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUAAUAACUUUU----UAC----GCCCAAA-GUCCAGUCAA
+CCAGGCUGCUGUUCGCGAGGCUGUUAUC-AUUCCUCUGGCAGAGGUUAAAGGCUGUUCAUGGGAUGAUGGACCUGCUCUU
+UAUCUGGGUUUUGCUGCAGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACCUUUUUCCCACUUGUGAUUGAGAUGCACCG
+UGUCCUGAAGGAUGGGAUGGAUGUCAACUUCAUGAGAAAGGUCUUGCGUCAGCGCUAUGGCGCACUGACUGCAGAACAAU
+GGAUGAGGCAGGAGAUAGUGGCCA-UUAGGGCUGCCUUUGAGGCUGUUGGGGCUCUUCCUUGGGCC-AGAACUGGAUUCU
+CUCCAGCUGCCAGGGAA-UUCCUUGCCCAAUUCGGUAUCCGCAUUUAAACGGCUGGUUGAAAUCAUAGUAGUUGAUGUAG
+UGUAAAA------AAAGUAAAAAAAUAAAACAAAAAAAGUAUAAAAAAUAAAAAAAGUAUAAAAAAACUAUAAAAAACAA
+AAAAACAAAAAAAAUAGUAGUACUUAGCUUAGCUAAGUACUACAAUAUUAGCAGCUGCUAAUGUCAUUAAAGCGCUCAC-
+--------------------------------------------------
+>EU561644 Oropouche virus strain BR/2004/Acre27 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------UUGAAGCUAGAUAC-GGACAAGUGC-UCAAUGCUGGUGUUGUUAG
+AGUCUUCUUCCUCAACCAAAAGAAGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CCUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAA---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAGAAGC---------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083643 Aino virus isolate KH-1/AI/C/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCGAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACCAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCGCAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083639 Aino virus isolate TN-7/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCGAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083623 Aino virus isolate YL-6/AI/M/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAGGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAGUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083618 Aino virus isolate YL-1/AI/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUAGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF676998 Aino virus isolate YL-1/AINO/C/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUUUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUCAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ610138 Shuni virus isolate SAE7209 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAAA--ACAAA---UCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGUUGACCAUG
+UAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUGACUGCAGAACAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUUC-----------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ610140 Shuni virus isolate SAE3810 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAAA--ACAAA---UCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGUUGACCAUG
+UAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUGACUGCAGAACAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUCU-----------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083644 Aino virus isolate KH-2/AI/C/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAGAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUCGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGGCUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083633 Aino virus isolate TN-1/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUCUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCCGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083632 Aino virus isolate YL-6/AI/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+GCUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAGGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083622 Aino virus isolate YL-5/AI/M/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCCAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--GCAAG---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGUGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGGUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGCCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB568273 Peaton virus N gene for nucleocapsid, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------------------------------AU
+UUGGUGGC---AUCA--AAUUUACAUUGGUUAAUAACCAUUUUCCCCAAUACACA-GCAAAUCCUGUGCCAGACACUGCC
+CUCACUCUCCACCGCCUCUCCGGCUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUAA---CCAAAUCAA
+ACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGAGGGACUCACCAUG
+UACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUAUUGAUAUGCACAG
+AGUGCUAAAA----------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KY555813 Mermet virus segment S nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------------------CGUACUCUAGCAUAGACUACUACUCCACAAUUCAAAAACU
+UAAAGU------UCUUAAAUAGU------AUGGC------UGAUGCGAUAGUUUUCAACGAUGUACCU-CAACGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUAUUAACACCGCUCG
+AAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCUAC-----UGUCAAUCUUACUU
+UUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUUCCACAGUUC-CAAUCAAAUCCGGUUGCAGAUACAGCC
+CUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGC----UAAUGACUUUUUAC-----UCUCAGAGCCCAGUCAA
+CCAGGCUGCUGUCCGUGAGGCCGUAGUU-AUUCCUUUAGCAGAAGUGAAAGGAUGCUCAUGGGAUGAUGGACCAGCACUC
+UACUUGGGGUUUGCCUCAGGAGCUGAAAUGUUCCUGCAA-ACA--UUUACUUUUUUCCCAUUAGUGAUCGAGAUGCAUCG
+UGUGCUCAAAGACGGGAUGGAUGUCAACUUCAUGCGGAAGGUUCUCCGCCAGCGCUAUGGCGCAUUGACUGCUGAACAAU
+GGAUGAGACAGGAGCUGGUUGCAA-UUCGUGCAGCAUUUGAAGCUGUCGGGGCACUCCCGUGGGCA-AGAACUGGAUUCU
+CUCCAGCUGCAAGAGAA-UUCUUGGCUCAAUUUGGUAUCCGUAUAUAAUUAUCCCAUAGUAAUCAUAAACAAUAAAAUAA
+AAUAUAUAAAAUAAACAAAAAAAGUAUAAAAUAAAAUAAAACACAAAAAAACUAUAAAAAACAAAAAAAC----------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF697158 Utive virus isolate Pan An 48878 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------------------------------AGUAGUGUACUCCGCAAUUUCAAAAUA
+AAAAAG------AAUUUAUAAAA------AUGGC---------AGAAUUUGUAUUCAAUGAUGUCCCC-CAGAGGUCUAC
+AUCAACAUUUGACCCAGAGGUGGCCUAUGCUACUUUUGAAGC--AGCAUUUCGCCAGACUCUAAAUGUCAAUGUUGUUAG
+AGUGUUCUUUUUAAACCAAAAGAAUGCUAAAAAU-GUUUUGAGAAAAACCUCAAGACCAAA-----UGUGGAUUUGACAU
+UUGGGGG-----UGCAACCUUUCCAAUUGUCAACAACCAUUUUCCUCAAUUU-CAAUCAAAUCCAGUCCCUGAUAAUGGG
+CUCACUCUUCAUAGACUGUCAGGCUAUUUGGCCAGAUGGUC---UAUGGACCAAAUGCGAA---CCAA---UCCAAUUCG
+UCAAGCUGAAUUUAGGGCUGCUGUAGUGG-UCCCUCUUGCUGAAAUUAAGGGGUGCACUUGGAACGAUGGUGAUGCUAUG
+UACCUAGCCUUUGCUGCAGGAGCUGAAAUGUUUUU--AA-ACACCUUUACUUUCUUCCCGCUGGUUAUUGAGAUGCACAG
+GGUCCUCAAGGAUGGCAUGGAUGUCAAUUUCAUGAGAAAAGUACUAAGACAAAGAUAUGGGACAAAAACAGCCGAACAAU
+GGAUGAAGGAUGAAAUUAUCCCAA-UUAAGGCGGCCUUUGAAGCUGUUGGUAUGCUGAGCUGGGCU-AGAACUGGAUUCU
+CUCCUGCUGCAAGAGAC-UUCUUGCGCCAAUUUGGAAUCAAUGUCUAAAAGAGACA--UUACAAAUUAAAAUAAAAUAUA
+AAAAAUACAAAAAAAUAAUAAAAAUAUAAAAAUACAAAAAAAGCACCUUAGGGUGCAAAAGAUUAGCUGCUUAAGGGUUG
+GGUGGUUGGGGACUUAACAAAUCAGCUCAUUGUAUUUAUUUUGAAAUUGGGAGCACACUACU------------------
+--------------------------------------------------
+>KC525996 Shuni virus strain SAE1511 nucleocapsid gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAAA--ACAAA---UCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGUUGACCAUG
+UAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUGACUGCAGAACAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCA-----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>JQ726397 Shuni virus isolate MVA4310 nucleoprotein-like gene, partial sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAAA--ACAAA---UCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGUUGACCAUG
+UAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUGUCCUCUGGUCAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUGACUGCAGAACAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGAUCU------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ610143 Shuni virus isolate SAE10910 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAAA--ACAAA---UCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGUUGACCAUG
+UAUUUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUGACUGCAGAACAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUCU-----------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HQ610141 Shuni virus isolate SAE3910 nucleoprotein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAAA--ACAAA---UCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGUUGACCAUG
+UAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCAUUGAUGUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUGACUGCAGAACAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUCU-----------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083626 Aino virus isolate CY-1/AI/C/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGCAGACC-AAUGCAAA--ACAAA---CCAGAUUAA
+ACUGGCUGAGGCCAUGGAAAAAAUUGUC-AUGCCACUUGCUGAAGCGAAAGGUUGCACCUGGACUGAAGGACUGACUAUG
+UAUCUGGGAUUUGCACCAGGCGCUGAAAUGUUUUUAGAA-ACA--UUUGAGUUCUACCCUCUGAUUAUUGACAUGCACAG
+AGUGCUGAAAGAUGGAAUGGAUGUUAACUUUAUGAGAAAGGUCCUUCGUCAGCGCUAUGGUACAUUGACUGCAGAACAGU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG100826 Oropouche like virus isolate A12 nucleocapsid gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------UGGUGUUGCUAG
+AGUCUUCUUCUCCCACCAAAAGAUGGCCAAAGAU-GUCUUACGUAAGACAUCGAGGCCCAU-----GGUUGACCUUACUU
+UUGGUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAG-------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>JQ726398 Shuni virus isolate MVA3510 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUAUAGAUC-AAUGCAAA--ACAAA---UCAAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGUUGACCAUG
+UAUCUGGGAUCCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--CUCGAAUUCUAUCCUCUGGUCAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUGACUGCAGAACAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUCU-----------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>NC_043593 Mermet virus isolate AV 782 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------------UCUUCCACAAUUCAAAAACU
+UAAAGU------UCUUAAAUAGU------AUGGC------UGAUGCGAUAGUUUUCAACGAUGUACCU-CAACGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUAUUAACACCGCUCG
+AAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCUAC-----UGUCAAUCUUACUU
+UUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUUCCACAGUUC-CAAUCAAAUCCGGUUGCAGAUACAGCC
+CUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGC----UAAUGACUUUCUAC-----UCUCAGAGCCCAGUCAA
+CCAGGCUGCUGUUCGUGAGGCUGUAGUU-AUUCCUUUAGCAGAAGUGAAAGGAUGCUCAUGGGAUGAUGGACCAGCACUC
+UACUUGGGGUUUGCCUCAGGAGCUGAAAUGUUCCUGCAA-ACA--UUCACUUUUUUCCCAUUAGUAAUUGAGAUGCACCG
+UGUGCUCAAAGACGGGAUGGAUGUCAACUUCAUGCGGAAGGUUCUCCGCCAGCGCUAUGGCGCAUUGACUGCUGAACAAU
+GGAUGAGACAGGAGCUGGUUGCAA-UUCGUGCAGCAUUUGAAGCUGUCGGAGCACUCCCAUGGGCA-AGAACUGGAUUCU
+CUCCAGCUGCAAGAGAA-UUCUUGGCUCAAUUUGGUAUCCGCAUAAAUUAUCCCAUAAUAAUCAUAAACAGUGAAAUAAA
+AUAUAUAAAAUAAACAAAAAAAGUAUAAAAAUAAAAUAAAACACAAAAAAACUAUAAAAAAACAAAAAAACAAAAAAAUA
+GUAGUACUUAGCUUAGCUAAGUACUACAACAUUAGCAGCUGCUAAAGUUAUUAUAUCGCCUUGAUCAGUCUAUAUUAAUU
+GCUUUAUAUUCAUCUUUGAAUUG---------------------------
+>KF697152 Mermet virus isolate AV 782 nucleocapsid protein gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------------------UCUUCCACAAUUCAAAAACU
+UAAAGU------UCUUAAAUAGU------AUGGC------UGAUGCGAUAGUUUUCAACGAUGUACCU-CAACGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUAUUAACACCGCUCG
+AAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCUAC-----UGUCAAUCUUACUU
+UUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUUCCACAGUUC-CAAUCAAAUCCGGUUGCAGAUACAGCC
+CUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGC----UAAUGACUUUCUAC-----UCUCAGAGCCCAGUCAA
+CCAGGCUGCUGUUCGUGAGGCUGUAGUU-AUUCCUUUAGCAGAAGUGAAAGGAUGCUCAUGGGAUGAUGGACCAGCACUC
+UACUUGGGGUUUGCCUCAGGAGCUGAAAUGUUCCUGCAA-ACA--UUCACUUUUUUCCCAUUAGUAAUUGAGAUGCACCG
+UGUGCUCAAAGACGGGAUGGAUGUCAACUUCAUGCGGAAGGUUCUCCGCCAGCGCUAUGGCGCAUUGACUGCUGAACAAU
+GGAUGAGACAGGAGCUGGUUGCAA-UUCGUGCAGCAUUUGAAGCUGUCGGAGCACUCCCAUGGGCA-AGAACUGGAUUCU
+CUCCAGCUGCAAGAGAA-UUCUUGGCUCAAUUUGGUAUCCGCAUAAAUUAUCCCAUAAUAAUCAUAAACAGUGAAAUAAA
+AUAUAUAAAAUAAACAAAAAAAGUAUAAAAAUAAAAUAAAACACAAAAAAACUAUAAAAAAACAAAAAAACAAAAAAAUA
+GUAGUACUUAGCUUAGCUAAGUACUACAACAUUAGCAGCUGCUAAAGUUAUUAUAUCGCCUUGAUCAGUCUAUAUUAAUU
+GCUUUAUAUUCAUCUUUGAAUUG---------------------------
+>JQ726395 Shuni virus isolate MVA1110 nucleoprotein-like gene, partial sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------CGUCUCUCAGGAUAUCUAGCAAAAUGGG---UUGUAGAUC-AAUGCAA------A------AAAUCAA
+AUUGGCAGAGGCCAUGGAAAAAAUAGUC-AUGCCACUUGCUGAAGUAAAAGGUUGUACCUGGACUGAGGGGUUGACCAUG
+UAUCUGGGAUUCGCACCAGGUGCUGAAAUGUUCCUGGAA-ACA--UUCGAAUUCUAUCCUCUGGUCAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGCGAAAGGUUCUUCGUCAACGCUAUGGGACAUUGACUGCAGAACAAU
+GGAUGACUCAAAAAAUAGAUGCUG-UCCGUGCAGCAUCU-----------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AF362399 Mermet virus strain AV-782 nucleocapsid protein (N) and non-structural protein (NSs) genes, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGGC------UGAUGCGAUAGUUUUCAACGAUGUACCU-CAACGGGCUCA
+AUCUACGUUUGAUCCGGAGGCACAAUAUGUGGUAUUUGAAAAUACAUACCGAGCA--AACCUCACUAUUAACACCGCUCG
+AAUUUUCUUCCUCAAUCAGAAGAGAGCCAAGGAUACU-UUACGUCAGACGCCGAGGCCUAC-----UGUCAAUCUUACUU
+UUGGACAGU--GUAC---AUUUCCAGUGGUUAAUAACCAUUUUCCACAGUUC-CAAUCAAAUCCGGUUGCAGAUACAGCC
+CUUACCCUGCACCGCCUCUCCGGCUACCUUGCGAGAUGGCUAAUGACU-------UUCUACUCUCAAA--GCCCAGUCAA
+CCAGGCUGCUGUUCGUGAGGCUGUAGUU-AUUCCUUUAGCAGAAGUGAAAGGAUGCUCAUGGGAUGAUGGACCACCAUUC
+UACUUGGGGUUUGCCUCAGGAGCUGAAAUGUUCCUGCAA-ACA--UUCACUUUUUUCCCAUUAGUAAUUGAGAUGCACCG
+UGUGCUCAAAGACGGGAUGGAUGUAAACUUCAUGCGGAAGGUUCUCCGCCAGCGCUAUGGCGCAUUGACUGCUGAACAAU
+GGAUGAGACAGGAGCUGGUUGCAA-UUCGGGCAGCAUUUGAAGCUGUCGGAGCACUCCCAUGGGCA-AAAACUGGAUUCU
+UUUCAGCUGCAAGAGAA-UUCUUGGCUCAAUUUGGUAUCCGCAUAUAA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083684 Peaton virus isolate YL-1/PEA/C/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUAA---CCAAAUCAA
+ACUGGCUGAGGCCACGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGAGGGACUCACCAUG
+UACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUAACUGCAGAGCAGU
+GGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083682 Peaton virus isolate YL-1/PEA/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACCAA---CCAAAUCAA
+ACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGAGGGACUCACCAUG
+UACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUAACUGCAGAGCAGU
+GGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083653 Akabane virus isolate YL-3/AKA/M/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083652 Akabane virus isolate YL-2/AKA/C/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083651 Akabane virus isolate YL-1/AKA/M/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCUACAAUCGUC-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083649 Akabane virus isolate KH-1/AKA/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+AUUUGCAGAAGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083648 Akabane virus isolate YL-1/AKA/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF676988 Akabane virus isolate YL-2/AKA/C/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF676987 Akabane virus isolate YL-1/AKA/C/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083655 Akabane virus isolate TN-2/AKA/M/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACGACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083654 Akabane virus isolate TN-1/AKA/M/15/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCAGAGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCGGGCUACUUAGCUCGCUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+ACUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083650 Akabane virus isolate KH-1/AKA/M/14/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCCCCAUCGCAUCUCGGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF676994 Akabane virus isolate YL-6/AKA/C/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAGG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUUCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF676993 Akabane virus isolate YL-5/AKA/M/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------GAAGGCCAA-GAUGGUCUUACAUAAGACGCCACAACCAGG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUUACAGUGGUUAAUAACCAUUUCCCCCAGUAUAC-UGCAAAUCCGGUGUCAGACACUGCC
+UUUACGCUCCAUCGCAUCUCAGGCUACUUAGCUCGAUGGG---UUGCUGAGC-AGUGCAA--GGCUAA---CCAGAUCAA
+AUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF083683 Peaton virus isolate YL-2/PEA/C/13/TW nucleoprotein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCCAAGUGGG---UUGCGGACC-AGUGCAA--GACUAA---CCAAAUCAA
+ACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGAGGGACUCACCAUG
+UACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACCCUCUAGUUAUUGAUAUGCACAG
+AGUGCUAAAAGAUGGGAUGGAUGUCAACUUCAUAAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUAACUGCAGAGCAGU
+GGAUGACUCAAAAAAUAGAGGCUG-UUCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KF676999 Peaton virus isolate YL-1/PEA/C/12/TW nucleocapsid protein (NP) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------CCAUCGUCUCUCAGGAUAUCUAGCCAAGUGGG---UUGCAGACC-AGUGCAA--GACUAA---CCAAAUCAA
+ACUGGCUGAGGCCAUGGAAAAAAUCGUC-AUGCCACUUGCUGAGGUGAAAGGUUGCACCUGGACCGAGGGACUCACCAUG
+UACCUAGGCUUUGCGCCAGGUGCAGAGAUGUUCCUUGAA-ACU--UUUGAGUUCUACUCUCUAGUUAUUGAUAUGCACAG
+AGUGCUAAGAGAUGGGAUGGAUGUCAACUUCAUGAGAAAAGUCCUCCGCCAGCGCUAUGGCACAUUAACUGCAGAGCAGU
+GGAUGACUCAAAAAAUAGAAGCUG-UUCGUGCAGCCUUCAAUGCUGU---------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX944293 Akabane virus strain Urf-F-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGUUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX944292 Akabane virus strain Urf-K-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX944291 Akabane virus strain Urf-I-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX944290 Akabane virus strain Urf-G-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX944289 Akabane virus strain Urf-D-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX944288 Akabane virus strain Urf-A-Coty-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AAGAUGGUCUUACAUAAGACGCCACAACCAAG-----UGUCGAUCUUACUU
+UUGCAGGG---GUCA--AAUUCACAGUGGUUAAUAACCAUUUUCCCCAGUACAC-UGCAAAUCCAGUGUCAGACACUGCC
+UUUACACUCCAUCGCAUCUCGGGCUACCUAGCUCGCUGGA---UUGCUGAGC-AGUGCAA--GGCUAA---UCAGAUCAA
+GUUUGCAGAGGCAGCUGCCACAAUUGUG-AUGCC----------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH484338 Thimiri orthobunyavirus strain VRC 66414 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------------------------------GUAGUAGUAGUGUACUCCACAAUUCAAAAAAC
+UUUAUA------AUUGAACAAAG------AUGUC------AGGUGUGUUUGUAUUCGACGAUGUACCU-CAACGGACUAC
+AUCUACAUUUGAUCCGGAGAAAGCAUAUGUGGCAUUUGAAGCUGCACAC-GGACAAGCUC-UCACUGUUGACACAGCUCG
+AGUGUUCUUCCUCAAUCAAAAGCGCGCCAAGGAUCGUC-UCCGUCAGACGUCGCAACCAGU-----UGUCGAUCUUACAU
+UUAACAAGCACGUC-----UUUCGAGUGGUUAAUAACCAUUUUCCACAAUUC-CAAUCAAACCCGGUUGGUGAUGCAGAC
+CUUACCCUGCACCGCCUCUCUGGAUACAUUGCGGUUUGGC---UAGCCCAGCAAGUGGU---GGUAGGUGGGGCUGUUAA
+ACUUGCUGAAAUAACCAGCAAGGUCAUA-AUCCCGCUGGCUGAGGUGAAAGGCUGUACCUGGAAUGAUGGGGCAGGAAUG
+UACCUGUCAUUCGCUUCGGGCACAGAGAUGUUUCUGGAG-ACA--UUCACUUUCUACCCGCUGGCCAUUGAGAUCCAGCG
+UGUGCUGAAAGAUGGAAUGGAUGUGACUUACAUGCGGAAAGUGCUCAGGCAGAGAUACGGGAAGAUGACUGCGGAAGAAU
+GGAUGCGCCAGAAGUU-GCCGGAGAUCACUGCUGCAGUCAAAGCAGUCGAGCAGCUGCCUUGGGCA-AGGUCUGGCUUCU
+CAGCCCAGGCUAGAG-CAUUCCUUGCUCAAUUCAAUAUUAAAAUCUAAUACCUGGCAAAUGCCAAAAUAUAUAAACAAAA
+AAGAUAAAAAUACAAAAAAAUAAUAAAAUAUAUAAAAACAAAAUAAAAAAUAUAAAAUACAAAAAAACCAAAUAAAAAUA
+UAGUAGCGUAGUACCUAGAUUAGCUAGGUACUACACAAUAACAGCAGCAAAAGGGUUGGGUGGUUGGGGACUAUUUCUCU
+AUUGCGUCUUUGGGUUCAUUUUUGAAUUGGGAGCACAC------------
+>KC986389 Schmallenberg virus isolate TR3 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------CAA--GGCUAGU-GUCC--UCAA
+ACUAGCUGAAGCUAGUGCUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GG------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG100825 Oropouche like virus isolate A4 nucleocapsid gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---------------------------------------------------------------------------GUUGU
+AGUAGUCCUCCGG---CACGGUAUGGCCAAAGACUG-CCUACGUGAGCAAUGGAUGCGUGA-----ACUAGAAGUUGCUG
+UAAGUGAG---AUCC--AAUUUGCAAUGGUUAAUAACCAAUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCUCAAGGAUGGCAUGGAUGUCAACUUUAUGAAGAAAGUCCUCCGGCAACGGUAUGGCCAAAAGACUGCCGAGCAAU
+GGAUGCGUGAAGAGAUAGUUGCUG-UAAGAG-------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG640116 Schmallenberg virus strain ALT-6GLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG640115 Schmallenberg virus strain ALT-11GLOK-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG640114 Schmallenberg virus strain ALT-12GLOK-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG640113 Schmallenberg virus strain ALT-2GLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG640112 Schmallenberg virus strain KRK-37VS-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG640111 Schmallenberg virus strain KRK-34VS-TR2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG640110 Schmallenberg virus strain ALT-62GLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MG640109 Schmallenberg virus strain ALT-61GLOK-TR2015 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH160010 Schmallenberg virus strain 537SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH160009 Schmallenberg virus strain 535SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH160008 Schmallenberg virus strain 534SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH160007 Schmallenberg virus strain 533SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH160006 Schmallenberg virus strain 532SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH160005 Schmallenberg virus strain 529SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH160004 Schmallenberg virus strain 526SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH160003 Schmallenberg virus strain 525SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH160002 Schmallenberg virus strain 522SB-KMR-TR2015 nucleocapsid protein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------AUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX609704 Schmallenberg virus strain HTY-10CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX609703 Schmallenberg virus strain HTY-9CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX609702 Schmallenberg virus strain HTY-8CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX609701 Schmallenberg virus strain HTY-7CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX609700 Schmallenberg virus strain HTY-6CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX609699 Schmallenberg virus strain HTY-2CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX609698 Schmallenberg virus strain HTY-1CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX590715 Schmallenberg virus strain HTY-4CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KX590714 Schmallenberg virus strain HTY-3CK-LOK-2016 nucleocapsid protein (N) gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------CUCAGAUUGUC-AUGCCCCUUGCUGAGGUUAAGGGAUGCACCUGGGCCGAUGGUUAUACAAUG
+UAUCUUGGAUUUGCACCUGGGGCCGAAAUGUUCCUUGAU-GCU--UUUGACUUCUAUCCACUAGUUAUUGAAAUGCAUAG
+GGUCCUCAAGGACAAUAUGGAUGUAAAUUUUAUGAAAAAAGUCCUCCGCCAACGCUAUGGAACAAUGACUGCUGAAGAAU
+GGA-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>AB075611 Oya virus gene for Nucleoprotein, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------GCCAAAGAUACU-UUACGUCAGACGCCGAGGCCCAA-----UGUUAAUCUUACUU
+UUGGACAG---UGCAC--AUUUCCAGUGGUUAAUAACCAUUAUCCACAAUUC-CAAUCGAAUCCGGUUAACGAUACAGCC
+CUUACCCUGCACCGCCUCUCUGGAUACCUUGCGAGAUGGCUGAUGAC--AUUUUAUGC------UCAGA-GCCCAGUCAA
+UCAGGCAGCUGUCCGUGAGGCAGUUAUU-AUUCCUCUGGCUGAAGUGAAGGGUUGUUCAUGGGAUGAUGGAGCUGCCCUC
+UAUCUGGGGUUUGCCGCAGGUGCAGAGAUGUUCUUACAG-ACA--UUCACCUUCUUCCCGCUUG-AAUCGAAAUGCACCG
+GGUUC---AGGA-GGGA-GGA-----------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734989 Leanyer virus isolate cs0002 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUCUACAGGACCUGACUUUAUCUAUGAUGAUAGACCUGCAGCAGUCUCA
+AGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUGCAGAUAAUGUUAG
+GAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAGGUCGACCUUCAAU
+UUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGUUGCAGACAAUGCC
+AUUACACUACACAGGCUUUCAGGAUAUUUAGCCAAAUGGUGUUUUG--------AUGAAAUCGACCA-UGGUCAAAUUGA
+AGAAGCUGAAGUCAAGUCAAAAGUGGUC-AUACCACUUGCAGAAGCAAAGGGCUGUAAAUGGGGAGAUGGUGUUGCUCUC
+UAUUUAGGCUUUGCACCAGGUGCAGAAAUGUUCCUUGAA-ACA--UUUGAGUUCUAUCCUUUUGUUAUUGAUAUGCAUAG
+AGUACUAAAGGACGGGAUGGAUGUCAACUUUAUGAGAAAAGUCCUUCGCCAGCGUUAUGGUACAAAAACAGCCGAUGAUU
+GGAUGAUCAGUGAAGUGGCUGCAAUUCAAAGC-GCUGUGAAAGUGGUUUCCAAAUUACCCUGGGCU-AAAGCUGGGUUCA
+CUGCUGCAGCUA-AGAAUUUCUUGGCAAAAUUCAAUAUUUCAGUUUGA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734991 Leanyer virus isolate cs503 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUCUACAGGACCCGACUUUAUCUAUGAUGAUAGACCUGCAGCAGUCUCA
+AGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUGCAGAUAAUGUUAG
+GAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAGGUCGACCUUCAAU
+UUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGUUGCAGACAAUGCC
+AUUACACUACACAGGCUUUCAGGAUAUUUAGCCAAAUGGUGUUUUG--------AUGAAAUUGACCA-UGGUCAAAUUGA
+AGAAGCUGAAGUCAAGUCAAAGGUGGUC-AUACCACUUGCAGAAGCAAAGGGCUGCAAAUGGGGAGAUGGCGUUGCUCUC
+UAUUUGGCAUUUGCACCAGGUGCAGAAAUGUUCCUGAAAGAC---UUUGAAUUCUAUCCUCUUGCAAUUGACAUUCAACG
+UGUUGUAAAAGAUGGGAUGGACAUAACAUUCAUGAGGAAAGUCCUUAAGCAGAGAUAUGGUACAAAAACAGCUGAUGAUU
+GGAUGAUCAGUGAAGUGACUGCAAUUCAAAGC-GCUGUGAAAGUGGUUGCCAAAUUGCCCUGGGCC-AAAGCUGGGUUCA
+CUGCUGCAGCUA-AGAAUUUCUUGGCAAAAUUCAAUAUUUCAGUUUGA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>NC_043562 Leanyer virus isolate AusN16701 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------AGUAGUGUGCUCCACGUCAAACGUAGUGCACUCCAUAAUCAAACAAUC
+UAUUG-------AAUUUACA--A-------UGUCUACAGGACCCGACUUUAUCUAUGAUGAUAGACCUGCAGCAGUCUCA
+AGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUGCAGAUAAUGUUAG
+GAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAGGUCGACCUUCAAU
+UUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGUUGCAGACAAUGCC
+AUUACACUACACAGGCUUUCAGGAUAUUUAGCCAAAUGGUGUUUUG--------AUGAAAUUGACCA-UGGUCAAAUUGA
+AGAAGCUGAAGUCAAGUCAAAGGUGGUC-AUACCACUUGCAGAAGCAAAGGGCUGCAAAUGGGGAGAUGGCGUUGCUCUC
+UAUUUGGCAUUUGCACCAGGUGCAGAAAUGUUCCUGAAAGAC---UUUGAAUUCUAUCCUCUUGCAAUUGACAUUCAACG
+UGUUGUAAAAGAUGGGAUGGACAUAACAUUCAUGAGGAAAGUCCUUAAGCAGAGAUAUGGUACAAAAACAGCUGAUGAUU
+GGAUGAUCAGUGAAGUGACUGCAAUUCAAAGC-GCUGUGAAAGUGGUUGCCAAAUUGCCCUGGGCC-AAAGCUGGGUUCA
+CUGCUGCAGCUA-AGAAUUUCUUGGCAAAAUUCAAUAUUU-CAGUUUGAGGAGUGCAUUUUCCUUCUUGGUAGUUUUAGU
+UGAAUAAAAUUUAUAAAAACACAAAAAAAAGUAUAAAACAUCAAAAAAUAUAUAAAAAAAGACCUUCGGGUCACCAACAU
+CUGCCUGACUAAUGAUAUAUAAUUACCUUGAUUUAACGUUUGACGUGGAGCACACUACU---------------------
+--------------------------------------------------
+>HM627177 Leanyer virus isolate AusN16701 segment S, complete sequence
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------AGUAGUGUGCUCCACGUCAAACGUAGUGCACUCCAUAAUCAAACAAUC
+UAUUG-------AAUUUACA--A-------UGUCUACAGGACCCGACUUUAUCUAUGAUGAUAGACCUGCAGCAGUCUCA
+AGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUGCAGAUAAUGUUAG
+GAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAGGUCGACCUUCAAU
+UUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGUUGCAGACAAUGCC
+AUUACACUACACAGGCUUUCAGGAUAUUUAGCCAAAUGGUGUUUUG--------AUGAAAUUGACCA-UGGUCAAAUUGA
+AGAAGCUGAAGUCAAGUCAAAGGUGGUC-AUACCACUUGCAGAAGCAAAGGGCUGCAAAUGGGGAGAUGGCGUUGCUCUC
+UAUUUGGCAUUUGCACCAGGUGCAGAAAUGUUCCUGAAAGAC---UUUGAAUUCUAUCCUCUUGCAAUUGACAUUCAACG
+UGUUGUAAAAGAUGGGAUGGACAUAACAUUCAUGAGGAAAGUCCUUAAGCAGAGAUAUGGUACAAAAACAGCUGAUGAUU
+GGAUGAUCAGUGAAGUGACUGCAAUUCAAAGC-GCUGUGAAAGUGGUUGCCAAAUUGCCCUGGGCC-AAAGCUGGGUUCA
+CUGCUGCAGCUA-AGAAUUUCUUGGCAAAAUUCAAUAUUU-CAGUUUGAGGAGUGCAUUUUCCUUCUUGGUAGUUUUAGU
+UGAAUAAAAUUUAUAAAAACACAAAAAAAAGUAUAAAACAUCAAAAAAUAUAUAAAAAAAGACCUUCGGGUCACCAACAU
+CUGCCUGACUAAUGAUAUAUAAUUACCUUGAUUUAACGUUUGACGUGGAGCACACUACU---------------------
+--------------------------------------------------
+>KP310501 Oropouche virus strain OROV/MT_CbaAR1256/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----UGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUC---------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM107842 Oropouche virus isolate AMLq16 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---GUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUU----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM107841 Oropouche virus isolate AMLq14 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---GUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCACGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUC---------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP310500 Oropouche virus strain OROV/MT_CbaAR1229/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------GG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCA--------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>HM107840 Oropouche virus isolate AMLq13 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+---GUGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GG------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH734990 Leanyer virus isolate cs0010 segment S polymerase gene, complete cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-----------------------------AUGUCUACAGGACCUGACUUUAUCUAUGAUGAUAGACCUGCAGCAGUCUCA
+AGC-ACAUUUAAUCCUGAAAAAGGAUACAUGGAUUUUAUCACUGCAUAC--GGAAAGAACAUCAAUGCAGAUAAUGUUAG
+GAUCUUCUUUCUUAAUCACAAGAAGGCCAAGGAUUCUCU----CAAGGGUUCAC--CUAAGGUCGAGGUCGACCUUCAAU
+UUGGAAC---UCUCAG--AGUCAAGGUUGUUAAUAACCAUAAUCCACGCAACAGGGAC-AACCCUGUUGCAGACAAUGCC
+AUUACACUACACAGGCUUUCAGGAUAUUUAGCCAAAUGGUGCUUUG--------AUGAAAUCGACCA-UGGUCAAAUUGA
+AGAAGCUGAAGUCAAGUCAAAAGUGGUC-AUACCACUUGCAGAAGCAAAGGGCUGUAAAUGGGGAGAUGGUGUUGCUCUC
+UAUUUAGCAUUUGCACCAGGUGCAGAGAUGUUCCUGAAAGAC---UUUGAAUUCUACCCGCUUGCAAUUGACAUUCAGCG
+UGUUGUGAAAGAUGGAAUGGACAUAACAUUUAUGAGGAAAGUCCUUAAGCAGAGAUAUGGCACAAAAACAGCCGAUGAUU
+GGAUGAUCAGUGAAGUGGCUGCAAUUCAAAGC-GCUGUGAAAGUGGUUUCCAAAUUACCCUGGGCU-AAAGCUGGGUUCA
+CUGCUGCAGCUA-AGAAUUUCUUGGCAAAAUUCAAUAUUUCAGUUUGA--------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MF155931 Oropouche virus isolate BA/BR/UFBA/LabViro/01 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------CAAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGUUCA--------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH337271 Oropouche virus strain OROV_BR/MT_CbaH_1251/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------UUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGU--UCAA-----------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH337272 Oropouche virus strain OROV_BR/MT_CbaH_1248/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------AUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGU--UCAA-----------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH337269 Oropouche virus strain OROV_BR/MT_VGH_1303/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------UUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGU-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH337268 Oropouche virus strain OROV_BR/MT_CbaH_1292/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------AUGAUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACACAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGU--UCAA-----------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH337267 Oropouche virus strain OROV_BR/MT_CbaH_1293/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-------------------------AUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGU--UCAA-----------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH331012 Oropouche virus strain OROV_BR/MT_CbaH_1256/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGCAUAG
+GGU-----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP347671 Oropouche virus isolate OROV/MT_CbaH282/2012 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------GG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUGGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCACAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAUAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUG----------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>MH337270 Oropouche virus strain OROV_BR/MT_CbaH_1279/2015 nucleoprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAGGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUAAAAAUGCAUAG
+GGU--UCAA-----------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP347672 Oropouche virus strain OROV/MT_CbaH436/2012 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+----------CAAUCACCAAAGGGAAGAAAGUGAAUGUUUGCAGGAACAUCUCAGCACCAGCAGCAAACCCCAGGUACAU
+UGCGUCACCAUCAUUCCAAGUACAGCCCUUUACCUCAGCCAAAGGCACUACUACAGUGGCUCUGAACUCAGCUUGCUUAA
+UUGGUGAUCGCAUCUGGGUAAAGGCCCAGCGCGCUAGGUAUCCUGACAGACGGUGCAGGGUAAGACCGUUGUCCGGCACU
+GGAUUCGACUGGAACUGUGGGAAAUGGUUAUUAACCAUUGCAAAAUGGACCCCAAU------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP310506 Oropouche virus strain OROV/MT_CbaAR632/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+-UAUAGGG---GUCC--AAUUUGCAAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUGGAAUCCAGUGCCGGACAACGGU
+AUUACCCUGCACCGUGUGUCAGGAUACUUAGCGCGAUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGUUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGAAUAG
+GGU--UCAA-----------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP347674 Oropouche virus isolate OROV/MT_CbaH498/2012 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+CUAUUCAUCUCAAUCACCAAAGGGAAGAAAGUGAAUGUUUGCAGGAACAUCUCAGCACCAGCAGCAAACCCCAGGUACAU
+UGCGUCACCAUCAUUCCAAGUACAGCCCUUUACCUCAGCCAAAGGCACUACUACAGUGGCUCUGAACUCAGCUUGCUUAA
+UUGGUGAUCGCAUCUGGGUAAAGGCCCAGCGCGCUAGGUAUCCUGACAGACGGUGCAGGGUAAGACCGUUGUCCGGCACU
+GGAUUCGACUGGAACUGUGGGAAAUGGUUAUUAACCAUUGCAA-------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP347673 Oropouche virus isolate OROV/MT_NMH470/2012 nucleoprotein (N) and non-structural protein (NSs) genes, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAUGAAUAG
+G-------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP310504 Oropouche virus strain OROV/MT_CbaAR549/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUG----------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP310502 Oropouche virus strain OROV/MT_CbaAR1458/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+------------------------AAUGGUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGG----------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
+>KP310507 Oropouche virus strain OROV/MT_CbaAR833/2013 polyprotein gene, partial cds
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+----------------------------GUUAAUAACCAUUUCCCACAGUUC-CAGUCGAAUCCAGUGCCGGACAACGGU
+CUUACCCUGCACCGUCUGUCAGGAUACCUAGCGCGCUGGGCCUUUACCCAG---AUGC----GAUCA-----CCAAUUAA
+GCAAGCUGAGUUCAGAGCCACUGUAGUAG-UGCCUUUGGCUGAGGUAAAGGGCUGUACUUGGAAUGAUGGUGACGCAAUG
+UACCUGGGGUUUGCUGCUGGUGCUGAGAUGUUCCUGCAA-ACA--UUCACUUUCUUCCCUUUGGUGAUUGAGAAAAAUAG
+GGUU----------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------------------------------------
+--------------------------------------------------
diff --git a/ThDy/sequences/primers/Bunyavirales - order/Lambert-Lanciotti-2009, Bunya-S.fasta b/ThDy/sequences/primers/Bunyavirales - order/Lambert-Lanciotti-2009, Bunya-S.fasta
index 5324623..54cc5e3 100644
--- a/ThDy/sequences/primers/Bunyavirales - order/Lambert-Lanciotti-2009, Bunya-S.fasta	
+++ b/ThDy/sequences/primers/Bunyavirales - order/Lambert-Lanciotti-2009, Bunya-S.fasta	
@@ -1,40 +1,34 @@
->Cal_Bwa_group_forward Orthobunyavirus N ORF, 210nt	
+>Cal_Bwa_group_forward Orthobunyavirus N ORF, 210nt	. Lambert-Lanciotti-2009, Bunya-S	
 GCAAATGGATTTGATCCTGATGCAG
 
->Cal_Bwa_group_reverse Orthobunyavirus N ORF, 210nt	
+>Cal_Bwa_group_reverse Orthobunyavirus N ORF, 210nt. Lambert-Lanciotti-2009, Bunya-S		
 TTGTTCCTGTTTGCTGGAAAATGAT
 
->Bun_group_forward Orthobunyavirus N ORF, 250nt	
+>Bun_group_forward Orthobunyavirus N ORF, 250nt. Lambert-Lanciotti-2009, Bunya-S		
 CTGCTAACACCAGCAGTACTTTTGAC
 
->Bun_group_reverse Orthobunyavirus N ORF, 250nt	
+>Bun_group_reverse Orthobunyavirus N ORF, 250nt. Lambert-Lanciotti-2009, Bunya-S		
 TGGAGGGTAAGACCATCGTCAGGAACTG
 
->Wyeomyia_forward Orthobunyavirus N ORF, 230nt	
+>Wyeomyia_forward Orthobunyavirus N ORF, 230nt. Lambert-Lanciotti-2009, Bunya-S		
 ATGTCTGAAATTGTATTTGATGATATTGG
 
->Wyeomyia_reverse Orthobunyavirus N ORF, 230nt	
+>Wyeomyia_reverse Orthobunyavirus N ORF, 230nt. Lambert-Lanciotti-2009, Bunya-S		
 TATTTCGATTCCCCGGAAAGT
 
->Oropouche_forward Orthobunyavirus N ORF, 300nt	
+>Oropouche_forward Orthobunyavirus N ORF, 300nt. Lambert-Lanciotti-2009, Bunya-S		
 GGCCCATGGTTGACCTTACTTT
 
->Oropouche_reverse Orthobunyavirus N ORF, 300nt	
+>Oropouche_reverse Orthobunyavirus N ORF, 300nt. Lambert-Lanciotti-2009, Bunya-S		
 ACCAAAGGGAAGAAAGTGAAT
 
->Nairo_forward Nairovirus S - N ORF, 400 nt	
-TCTCAAAGAAACACGTGCCGC
-
->Nairo_reverse Nairovirus S - N ORF, 400 nt	
-GTCCTTCCTCCACTTGWGRGCAGCCTGCTGGTA
-
->Phlebo_forward_1 Phlebovirus N ORF, 370 nt	
+>Phlebo_forward_1 Phlebovirus N ORF, 370 nt. Lambert-Lanciotti-2009, Bunya-S		
 TTTGCTTATCAAGGATTTGATGC
 
->Phlebo_reverse Phlebovirus N ORF, 370 nt	
+>Phlebo_reverse Phlebovirus N ORF, 370 nt. Lambert-Lanciotti-2009, Bunya-S		
 TCAATCAGTCCAGCAAAGCTGGGATGCATCAT
 
->Phlebo_forward_2 Phlebovirus N ORF, 370 nt	
+>Phlebo_forward_2 Phlebovirus N ORF, 370 nt. Lambert-Lanciotti-2009, Bunya-S		
 TTTGCTTATCAAGGATTTGACC
 
 
diff --git a/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Nairovirus_sL. Villinger, 2017.fasta b/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Nairovirus_sL. Villinger, 2017.fasta
new file mode 100644
index 0000000..8cf6bf9
--- /dev/null
+++ b/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Nairovirus_sL. Villinger, 2017.fasta	
@@ -0,0 +1,14 @@
+>Nairo_L_1a_F	Nairovirus_RdRp_(L_segment)_NC_005301_1–28_56.2_375	
+TCTCAAAGATATCAATCCCCCCITTACCC
+>Nairo_L_1b_F	Nairovirus_RdRp_(L_segment)_1–28_375	Villinger, 2017
+TCTCAAAGACATCAATCCCCCTTWTCCC
+>Nairo_L_1a_R	Nairovirus_RdRp_(L_segment)_187–214_150		Villinger, 2017
+CTATRCTGTGRTAGAAGCAGTTCCCATC
+>Nairo_L_1b_R	Nairovirus_RdRp_(L_segment)_185–215_150		Villinger, 2017
+GCAATACTATGATAAAAACAATTMCCATCAC
+>Nairo_L_1c_R	Nairovirus_RdRp_(L_segment)_187–214_150		Villinger, 2017
+CAATGCTGTGRTARAARCAGTTGCCATC
+>Nairo_L_1d_R	Nairovirus_RdRp_(L_segment)_187–215_150		Villinger, 2017
+GCAATGCTATGGTAGAAACAGTTTCCATC
+>Nairo_L_1e_R	Nairovirus_RdRp_(L_segment)_187–214_150		Villinger, 2017
+CRAKGCTGTGGTAAAAGCAGTTRCCATC
\ No newline at end of file
diff --git "a/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Dugbe orthonairovirus - specie/DUGV-Sp.184\342\200\223293. Vina-Rodrigues, 2019.fasta" b/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Dugbe orthonairovirus - specie/DUGV-Sp.184-293. Vina-Rodrigues, 2019.fasta
similarity index 100%
rename from "ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Dugbe orthonairovirus - specie/DUGV-Sp.184\342\200\223293. Vina-Rodrigues, 2019.fasta"
rename to ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Dugbe orthonairovirus - specie/DUGV-Sp.184-293. Vina-Rodrigues, 2019.fasta
diff --git a/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairo. Lambert-Lanciotti-2009. Bunya-S.fasta b/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairo. Lambert-Lanciotti-2009. Bunya-S.fasta
new file mode 100644
index 0000000..8d53a0a
--- /dev/null
+++ b/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairo. Lambert-Lanciotti-2009. Bunya-S.fasta	
@@ -0,0 +1,5 @@
+>Nairo_forward #530. Nairovirus S - N ORF, 400 nt. Lambert-Lanciotti-2009, Bunya-S		
+TCTCAAAGAAACACGTGCCGC
+
+>Nairo_reverse #527. Nairovirus S - N ORF, 400 nt. Lambert-Lanciotti-2009, Bunya-S	
+GTCCTTCCTCCACTTGWGRGCAGCCTGCTGGTA
diff --git a/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairo.fasta b/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairo.fasta
deleted file mode 100644
index 95f4313..0000000
--- a/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairo.fasta	
+++ /dev/null
@@ -1,5 +0,0 @@
->Nairo_reverse_527 Nairo	
-GTCCTTCCTCCACTTGWGRGCAGCCTGCTGGTA
-
->Nairo_forward_530 Nairo	
-TCTCAAAGAAACACGTGCCGC
diff --git a/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairobi sheep disease orthonairovirus - specie/NSDV_GV_sS Tarif,2012.fasta b/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairobi sheep disease orthonairovirus - specie/NSDV_GV_sS Tarif,2012.fasta
index 0f3ddbe..f3e5faf 100644
--- a/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairobi sheep disease orthonairovirus - specie/NSDV_GV_sS Tarif,2012.fasta	
+++ b/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairobi sheep disease orthonairovirus - specie/NSDV_GV_sS Tarif,2012.fasta	
@@ -7,6 +7,9 @@ TGACCATGCAGAACCAGATYG
 >NSDV_GV_R1A Tarif,2012. Pos S~193-215
 GAAACAAGCCTCATGCTAACCT
 
+>NSDV_GV_P1 Vina-Rodriguez, 2019. Pos S~90-103
+CAAGGATGCCATCCTTGCATGGCA
+
 >NSDV_GV_F2  Tarif,2012. F2xR2=313 pb. Pos S~874-894 inespecific: S~352-372,553-573, 
 GGAGAATGGCAAAGAGGTTGT 
 
diff --git a/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairobi sheep disease orthonairovirus - specie/Nairo_S Vina-Rodriguez,2019. 1000-1200 b/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairobi sheep disease orthonairovirus - specie/Nairo_S Vina-Rodriguez,2019. 1000-1200
new file mode 100644
index 0000000..0f07979
--- /dev/null
+++ b/ThDy/sequences/primers/Bunyavirales - order/Nairoviridae - family/Orthonairovirus - genus/Nairobi sheep disease orthonairovirus - specie/Nairo_S Vina-Rodriguez,2019. 1000-1200	
@@ -0,0 +1,8 @@
+>Nairo_S_f Vina-Rodriguez,2019. 1014-1038
+CAGGTGTGACWGCAGAGATGTTYCC
+
+>Nairo_S_p Vina-Rodriguez,2019. 1039-1065
+GACAGTCTCACAGTTYCTYTTTGAGCT
+
+>Nairo_S_r Vina-Rodriguez,2019. 1165-1189
+CATGTAAATCCGATTRGCAGTGAAG
\ No newline at end of file
diff --git a/ThDy/sequences/primers/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu group.fasta..txt b/ThDy/sequences/primers/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu group.fasta..txt
new file mode 100644
index 0000000..311aafc
--- /dev/null
+++ b/ThDy/sequences/primers/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/Simbu group.fasta..txt	
@@ -0,0 +1,23 @@
+>Simbu_F Camarao, 2019. NC018477  120-145
+TAGAGTCTTCTTCCTCAAYCAGAAGA
+
+>Simbu_R Camarao, 2019. NC018477  218-242
+TAYTGGGGAAAATGGTTATTAACCA
+
+>Simbu_CladeAP Camarao, 2019. NC018477  161-177 VIC-MGB 
+TACGTMAGACGYCGAGG
+
+>Simbu_CladeBP Camarao, 2019. NC018477  166-181 FAM-MGB
+TYGGTTGTGSCGTCTT
+
+
+
+>Uni-S-59F Golender-Wernike, 2018
+GATGTWCCWCAACGGAAT
+
+>Uni-S-254R Golender-Wernike, 2018
+TGGGGAAAATGGTTATTAAC
+
+>Uni-S-probe FAM--MGB-NFQ Golender-Wernike, 2018
+GAGTCTTCTTCCTCAA
+
diff --git a/ThDy/sequences/primers/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/pan-Simbu group.fasta b/ThDy/sequences/primers/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/pan-Simbu group.fasta
new file mode 100644
index 0000000..03a5bbc
--- /dev/null
+++ b/ThDy/sequences/primers/Bunyavirales - order/Peribunyaviridae - family/Orthobunyavirus - genus/pan-Simbu group.fasta	
@@ -0,0 +1,51 @@
+>Simbu.A.18
+TTTGGAGGGGTCAAA--TTTACACTG
+
+>Simbu.s.17
+TGGTCGGTATGGGCAACAA---CTTAACTTCAGTGTTGT
+
+>Akabane.s.16
+CAGTAAGTATGGGCAGCAG---CTCAACTTTACTGTTGC
+
+>Shuni.s.15
+TGCTAAAYATGGGGCCCAA---CTCAATTTCGATACCGT
+
+>Shuni.A.14
+TTTGGTGGCATCAAA--TTTACACTG
+
+>Akabane.A.13
+TTTGCAGGGGTCAAA--TTYACAGTG
+
+>Akabane.a.11
+TATGGGCAGCAG---CTCAACTTT
+
+>B.b.10
+GGGTATGTGGCATTTAT
+
+>B.h.9
+TAAGACGSCACAACCAAGTGTYGATCTTAC
+
+>B.h.8
+TAAGACGGCACAACCRAGTGTYGATCTTAC
+
+>h.7
+TAAGACGGCACAACCRAGTGT
+
+>p.6
+TCTTCTTCCTCAACCARAAGAAGGCCAA
+
+>p.5
+TAGAGTCTTCTTCCTCAACCARAAGAAGGC
+
+>p.4
+TAGAGTCTTCTTCCTCAACCARAAGA
+
+>p.2
+TAGAGTCTTCTTCCTCAACCA
+
+>f.1
+GATGTWCCWGCAACGGAAT
+
+
+>r.3_c
+TGGGGAAAATGGTTATTAAC
diff --git a/ThDy/sequences/primers/Bunyavirales - order/Phenuiviridae - family/Phlebovirus - genus/Phlebo.fasta b/ThDy/sequences/primers/Bunyavirales - order/Phenuiviridae - family/Phlebovirus - genus/Phlebo.fasta
deleted file mode 100644
index c3cc3ed..0000000
--- a/ThDy/sequences/primers/Bunyavirales - order/Phenuiviridae - family/Phlebovirus - genus/Phlebo.fasta	
+++ /dev/null
@@ -1,9 +0,0 @@
->Phlebo_reverse_526 Phlebo	
-TCAATCAGTCCAGCAAAGCTGGGATGCATCAT
-
->Phlebo_forward_1_528 Phlebo	
-TTTGCTTATCAAGGATTTGATGC
-
->Phlebo_forward_2_529 Phlebo	
-TTTGCTTATCAAGGATTTGACC
-
diff --git a/ThDy/sequences/primers/Bunyavirales - order/Phenuiviridae - family/Phlebovirus - genus/Phlebovirus_sS. Lambert-Lanciotti-2009.fasta b/ThDy/sequences/primers/Bunyavirales - order/Phenuiviridae - family/Phlebovirus - genus/Phlebovirus_sS. Lambert-Lanciotti-2009.fasta
new file mode 100644
index 0000000..9821bf2
--- /dev/null
+++ b/ThDy/sequences/primers/Bunyavirales - order/Phenuiviridae - family/Phlebovirus - genus/Phlebovirus_sS. Lambert-Lanciotti-2009.fasta	
@@ -0,0 +1,9 @@
+>Phlebo_reverse #526 Phlebovirus N ORF, 370 nt. Lambert-Lanciotti-2009, Bunya-S	
+TCAATCAGTCCAGCAAAGCTGGGATGCATCAT
+
+>Phlebo_forward_1 #528 Phlebovirus N ORF, 370 nt. Lambert-Lanciotti-2009, Bunya-S
+TTTGCTTATCAAGGATTTGATGC
+
+>Phlebo_forward_2 #529 Phlebovirus N ORF, 370 nt. Lambert-Lanciotti-2009, Bunya-S	
+TTTGCTTATCAAGGATTTGACC
+
diff --git a/ThDy/sequences/primers/Bunyavirales - order/Phenuiviridae - family/Phlebovirus - genus/Phlebovirus_sS. Villinger, 2017.fasta b/ThDy/sequences/primers/Bunyavirales - order/Phenuiviridae - family/Phlebovirus - genus/Phlebovirus_sS. Villinger, 2017.fasta
new file mode 100644
index 0000000..21145e2
--- /dev/null
+++ b/ThDy/sequences/primers/Bunyavirales - order/Phenuiviridae - family/Phlebovirus - genus/Phlebovirus_sS. Villinger, 2017.fasta	
@@ -0,0 +1,6 @@
+>Phlebo_JV3a_F	Phlebovirus_NP_(S_segment)_NC_014395_1549–1573_59.86_500	Villinger, 2017	
+AGTTTGCTTATCAAGGGTTTGATGC
+>Phlebo_JV3b_F	Phlebovirus_NP_(S_segment)_1550–1574_500		Villinger, 2017
+GAGTTTGCTTATCAAGGGTTTGACC
+>Phlebo_JV3_R	Phlebovirus_NP_(S_segment)_1201–1220_500		Villinger, 2017
+CCGGCAAAGCTGGGGTGCAT
diff --git a/ThDy/sequences/primers/Togaviridae - Family/Alphavirus - genus/SindbisV/Sindbis virus. Lundstrom-2010.fasta b/ThDy/sequences/primers/Togaviridae - Family/Alphavirus - genus/SindbisV/Sindbis virus. Lundstrom-2010.fasta
index abb6e45..ee71b1e 100644
--- a/ThDy/sequences/primers/Togaviridae - Family/Alphavirus - genus/SindbisV/Sindbis virus. Lundstrom-2010.fasta	
+++ b/ThDy/sequences/primers/Togaviridae - Family/Alphavirus - genus/SindbisV/Sindbis virus. Lundstrom-2010.fasta	
@@ -1,17 +1,24 @@
 >A1a		+ RT-PCR (527 bp) & Sequencing. Lundstrom-2010
 AAAGGATACTTTCTCCTCGC 
+
 >A2a - RT-PCR (527?bp) & Sequencing. Lundstrom-2010
 TGGGCAACAGGGACCATGCA
+
 >Alpha8187	+ RT-PCR (2075 bp) & Sequencing. Lundstrom-2010
-tggcaycayggngcngtncarta				
+tggcaycayggngcngtncarta		
+		
 >cAlpha10262 - RT-PCR (2075 bp) & Sequencing. Lundstrom-2010
 RTCRCARAARCANTRNGCNCCNCCCCACAT
+
 >Sin_AU_639c	+ RT-PCR (2418 bp) & Sequencing. Lundstrom-2010
 AAAAGGSGACAGTGGAMGAC		
+
 >Sin_AU_c3057c - RT-PCR (2418 bp) & Sequencing. Lundstrom-2010
 GCTACTGGTAAGGGATGTTGCTTGTATGTC	
+
 >Sin_AU_2423c	+ Sequencing. Lundstrom-2010
 CCTTCGAACATGCGACCACTGTCCC
+
 >Sin_AU_c2575c - Sequencing. Lundstrom-2010
 ACTTGCATGTGACGTACTCCAGGTTCG
 
diff --git a/ThDy/sequences/primers/Togaviridae - Family/Alphavirus - genus/VEEV/VEEV-PCR.paper.fasta b/ThDy/sequences/primers/Togaviridae - Family/Alphavirus - genus/VEEV/VEEV-PCR.paper.fasta
index 441b0f3..cae61f1 100644
--- a/ThDy/sequences/primers/Togaviridae - Family/Alphavirus - genus/VEEV/VEEV-PCR.paper.fasta	
+++ b/ThDy/sequences/primers/Togaviridae - Family/Alphavirus - genus/VEEV/VEEV-PCR.paper.fasta	
@@ -2,11 +2,11 @@
 >A_VIR966_f   Vina-Rodriguez et al. 2015. Modif Eshoo. PanAlpha (58-62°C)
 TCCATGCTAATGCYAGAGCGTTTTCGCA
 
->V_p          Vina-Rodriguez et al. 2015. Modif Eshoo. VEEV (25-63°C)
+>V_p          Vina-Rodriguez et al. 2015. VEEV (25-63°C)
 TGATCGARACGGAGGTRGAMCCATCC
 
 >A_VIR966.R   Vina-Rodriguez et al. 2015. Modif Eshoo. PanAlpha (28-49°C)
 TGGCGCACTTCCAATGTCHAGGAT
 
->A_VIR966.Rc   Vina-Rodriguez et al. 2015. Modif Eshoo. PanAlpha (28-49°C)
+>A_VIR966.R(c)   Vina-Rodriguez et al. 2015. Modif Eshoo. PanAlpha (28-49°C)
 ATCCTDGACATTGGAAGTGCGCCA
diff --git a/ThDy/sequences/primers/Togaviridae - Family/Alphavirus - genus/WEEV/WEEV.fasta b/ThDy/sequences/primers/Togaviridae - Family/Alphavirus - genus/WEEV/WEEV.fasta
deleted file mode 100644
index 3483753..0000000
--- a/ThDy/sequences/primers/Togaviridae - Family/Alphavirus - genus/WEEV/WEEV.fasta	
+++ /dev/null
@@ -1,10 +0,0 @@
-
->W10248_f    Lambert et al. 2003. WEEV. 10248-10267 (s)
-CTGAAAGTCGGCCTGCGTAT
-
->W10314c_r   Lambert et al. 2003. WEEV. 10314-10295 (as)
-CGCCATTGACGAACGTATCC
-
->W10271_p    Lambert et al. 2003. WEEV. 10271-10293 (s)
-ATACGGCAATACCACCGCGCACC
-
diff --git a/ThDy/sequences/primers/Villinger, 2017.txt b/ThDy/sequences/primers/Villinger, 2017.txt
new file mode 100644
index 0000000..42ff5a9
--- /dev/null
+++ b/ThDy/sequences/primers/Villinger, 2017.txt	
@@ -0,0 +1,35 @@
+
+
+>Bunya_group_F	Orthobunyavirus_NP_(S_segment)_NC_001927_114–139_58.92_167		Villinger, 2017
+CTGCTAACACCAGCAGTACTTTTGAC
+>Bunya_group_R	Orthobunyavirus_336–363_167		Villinger, 2017
+TGGAGGGTAAGACCATCGTCAGGAACTG
+
+>AlphaVir_2052_F	Alphavirus_nsP4_NC_001449_6971–6997_58.39_400		Villinger, 2017
+TGGCGCTATGATGAAATCTGGAATGTT
+>AlphaVir_2052_R	Alphavirus_7086–7109_400		Villinger, 2017
+TACGATGTTGTCGTCGCCGATGAA
+
+>Flavi_JV2a_F	Flavivirus_nsP5_NC_009942_9097–9120_58.63_200		Villinger, 2017
+AGYMGHGCCATHTGGTWCATGTGG
+>Flavi_JV2b_F	Flavivirus_9097–9120_125		Villinger, 2017
+AGCCGYGCCATHTGGTATATGTGG
+>Flavi_JV2c_F	Flavivirus_9097–9120_125		Villinger, 2017
+AGYCGMGCAATHTGGTACATGTGG
+>Flavi_JV2d_F	Flavivirus_9097–9120_50		Villinger, 2017
+AGTAGAGCTATATGGTACATGTGG
+>Flavi_JV2a_R	Flavivirus_9283–9305_400		Villinger, 2017
+GTRTCCCADCCDGCDGTRTCATC
+>Flavi_JV2b_R	Flavivirus_9283–9305_100		Villinger, 2017
+GTRTCCCAKCCWGCTGTGTCGTC
+
+>Thogoto_S6_F	Thogotovirus_M_(segment_6)_NC_006504_486–510_60.28_300		Villinger, 2017
+GATGACAGYCCTTCTGCAGTGGTGT
+>Thogoto_S6_R	Thogotovirus_771–797_300		Villinger, 2017
+RACTTTRTTGCTGACGTTCTTGAGGAC
+
+>Dhori_S5F_	Dhori_NP(segment_5)_M17435_1024–1042_56.51_800		Villinger, 2017
+CGAGGAAGAGCAAAGGAAAG
+>Dhori_S5_R	Dhori 1107–1125 800		Villinger, 2017
+GTGCGCCCCTCTGGGGTTT
+
diff --git a/ThDy/sequences/probes/pan-Simbu group.fasta b/ThDy/sequences/probes/pan-Simbu group.fasta
new file mode 100644
index 0000000..64c1cfb
--- /dev/null
+++ b/ThDy/sequences/probes/pan-Simbu group.fasta	
@@ -0,0 +1,51 @@
+>Simbu18 nt 190. Tm: 49-54 C (no 42 C)
+TTTGGAGGGGTCAAATTTACACTG
+
+>Simbu17 nt 74. Tm: 66 C (no 53 C)
+TGGTCGGTATGGGCAACAACTTAACTTCAGTGTTGT
+
+>Akabane16 nt 74. Tm: 55-66 C
+CAGTAAGTATGGGCAGCAGCTCAACTTTACTGTTGC
+
+>Shuni15 nt 74. Tm: 59-67 C
+TGCTAAAYATGGGGCCCAACTCAATTTCGATACCGT
+
+>Shuni14 nt 190. Tm: 49-54 C
+TTTGGTGGCATCAAATTTACACTG
+
+>Akabane13 nt 190. Tm: 48-56 C
+TTTGCAGGGGTCAAATTYACAGTG
+
+>Akabane11 nt 81. Tm: 40-55 C
+TATGGGCAGCAGCTCAACTTT
+
+>cladeB10 nt 57. Tm: 36-47 C
+GGGTATGTGGCATTTAT
+
+>cladeB9 nt 159. Tm: 46-61 C
+TAAGACGSCACAACCAAGTGTYGATCTTAC
+
+>cladeB8 nt 159. Tm: 52-60 C
+TAAGACGGCACAACCRAGTGTYGATCTTAC
+
+>cladeB7 nt 159. Tm: 42-56 C
+TAAGACGGCACAACCRAGTGT
+
+>panSimbu6 modify Simbu_F Camarao, 2019. NC018477 nt 125. Tm: 33-49 C
+TCTTCTTCCTCAACCARAAGAAGGCCAA
+
+>panSimbu5 modify Simbu_F Camarao, 2019. NC018477 nt 120. Tm: 55-60 C
+TAGAGTCTTCTTCCTCAACCARAAGAAGGC
+
+>panSimbu4 modify Simbu_F Camarao, 2019. NC018477 nt 120. Tm: 48-55 C
+TAGAGTCTTCTTCCTCAACCARAAGA
+
+>panSimbu2 modify Simbu_F Camarao, 2019. NC018477 120. Tm: 40-50 C 
+TAGAGTCTTCTTCCTCAACCA
+
+>Uni-S-59F Golender-Wernike, 2018. Very low Tm: 20-40 C
+GATGTWCCWGCAACGGAAT
+
+
+>Uni-S-254R(c) Golender-Wernike, 2018 -r.3_c
+GTTAATAACCATTTTCCCCA
diff --git a/include/ThDySec/sec_mult.h b/include/ThDySec/sec_mult.h
index 2baba80..109947c 100644
--- a/include/ThDySec/sec_mult.h
+++ b/include/ThDySec/sec_mult.h
@@ -52,7 +52,7 @@ class CMultSec
 		CMultSec			*_parentMS {nullptr};		///< std::weak_ptr<CMultSec> _parentMS	;
         CSec				*_Consenso {nullptr};
         bool                 _selected { true };
-		std::string			 _Path ;				///< file path of the original sequence source
+		std::string			 _orig_file_path ;				///< file path of the original sequence source
 
 
      //explicit CMultSec (const std::string &Name  )                 : _name		(trim_string(Name))  {	}
@@ -111,7 +111,7 @@ class CMultSec
 			return path;
         }
 
-        /// Construct a filesystem path acording to the current tree, which can be different from the original path saved in member variable ._Path
+        /// Construct a filesystem path acording to the current tree, which can be different from the original path saved in member variable ._orig_file_path
 		std::string	path( )
 		{
 			std::string sep(std::string(1, std::filesystem::path::preferred_separator));// ::slash<std::filesystem::path>().value));
@@ -238,7 +238,7 @@ class CMultSec
         /// (will try all child of base to set the base dir and export)
         /// To decide the name of the file it need the path of the base node that do not form part of the file name
         /// That is for example: "all_seq/Primers for Multiplex PCR/"...
-        bool    Export_from   ( CMultSec& base, bool only_selected)  ;
+        bool    Export_from   ( CMultSec& tree_base, bool only_selected)  ;
 
 		/// Export local sequences to a new file in fasta format with filters applied
 
diff --git a/include/ThDy_DNAHybrid.Nana/SeqExpl.h b/include/ThDy_DNAHybrid.Nana/SeqExpl.h
index 2f11831..68a314a 100644
--- a/include/ThDy_DNAHybrid.Nana/SeqExpl.h
+++ b/include/ThDy_DNAHybrid.Nana/SeqExpl.h
@@ -162,21 +162,21 @@ class SeqExpl : public CompoWidget
     Node ReloadDir    (Tree::item_proxy tn)
     {            
         CMultSec *ms = tn.value<CMultSec*>();
-        if (ms->_Path.empty()) 
+        if (ms->_orig_file_path.empty())
         {
             for (Tree::item_proxy& ntn : tn)
                 ReloadDir(ntn);
             return tn;
         }
-        else return Refresh(Replace(tn, ms, ms->_Path,true)).expand(true).select(true);//true
+        else return Refresh(Replace(tn, ms, ms->_orig_file_path,true)).expand(true).select(true);//true
     }
     Node ReloadFile   (Tree::item_proxy tn)
     {            
         CMultSec *ms = tn.value<CMultSec*>();
-        if (ms->_Path.empty())  
+        if (ms->_orig_file_path.empty())
            return tn;
         else
-           return Refresh(Replace(tn, ms, ms->_Path,false));
+           return Refresh(Replace(tn, ms, ms->_orig_file_path,false));
     }
     void ShowLocals(bool showLocals)
     {        
diff --git a/include/ThDy_DNAHybrid.Nana/TableResults.h b/include/ThDy_DNAHybrid.Nana/TableResults.h
index 1e34b5f..3468a17 100644
--- a/include/ThDy_DNAHybrid.Nana/TableResults.h
+++ b/include/ThDy_DNAHybrid.Nana/TableResults.h
@@ -27,7 +27,6 @@ using List = nana::listbox;
 
 class TableHybRes  : public nana::form, public EditableForm
 {   
-    using Table = CTable<TmGPos> ;
     using index = Table::index;
     struct value
     {
@@ -112,6 +111,7 @@ class TableHybRes  : public nana::form, public EditableForm
                            _bG   {*this,("G"  )},   
                            _bPos {*this,("Pos")},
                            _byCol{*this,("<--")},
+                           _descr{*this,("Description")},
                            _mix  {*this, ("Consolidate")};
 
     std::shared_ptr<Table> _table;
@@ -119,7 +119,7 @@ class TableHybRes  : public nana::form, public EditableForm
     G                      _G  {_table.get()};
     Pos                    _Pos{_table.get()};
     value                  *val { &_Tm} ;
-    std::size_t            mTm, mG, mP;
+    std::size_t            mTm, mG, mP, mDescr;
  
     void SetValType(value &val_)
     { 
@@ -178,11 +178,11 @@ class TableHybRes  : public nana::form, public EditableForm
     }
     void AsignWidgetToFields() override
     {
- 	    _place.field("toolbar"       ) <<_bTm << _bG << _bPos << _byCol ;
+ 	    _place.field("toolbar"       ) << _descr <<_bTm << _bG << _bPos << _byCol ;
  	    _place.field("_list"         ) <<_list;
 	}
  public:
-     explicit TableHybRes    (std::shared_ptr<CTable<TmGPos>>& table)  :
+     explicit TableHybRes    (std::shared_ptr<Table>& table)  :
                             nana::form (nana::rectangle( nana::point(50,5), nana::size(1000,650) )),
                             EditableForm    (nullptr, *this,  table->TitTable(), "TableTm.lay.txt"),
                             _table(table)
@@ -248,6 +248,12 @@ class TableHybRes  : public nana::form, public EditableForm
                             _bPos.pushed(true );
                             _menuProgram.checked(mP, true);
                         });
+        _descr.events().click([this]()
+                             {
+                                 _descr.pushed(!_descr.pushed());
+                                 SetValType(*val);
+                                 _menuProgram.checked(mDescr, _descr.pushed());
+                             });
 
         _byCol.events().click([&]()
           {
@@ -270,7 +276,7 @@ class TableHybRes  : public nana::form, public EditableForm
         _bTm .enable_pushed(true).pushed(true);
         _bG  .enable_pushed(true).pushed(false);
         _bPos.enable_pushed(true).pushed(false);
-
+        _descr.enable_pushed(true).pushed(true);
 
         _menuProgram.append_splitter();
         
@@ -285,6 +291,9 @@ class TableHybRes  : public nana::form, public EditableForm
         mP=_menuProgram.append      ( ("Show Pos")    , [&](nana::menu::item_proxy& ip) { Click( _bPos);})
                         .check_style( nana::menu::checks::option)
                         .index();
+        mDescr=_menuProgram.append      ( ("Show Description")    , [&](nana::menu::item_proxy& ip) { Click( _descr);})
+                .check_style( nana::menu::checks::option)
+                .index();
     }
     void SetFormat(int dec=1 , int len=6)  // ??
     {  
@@ -303,7 +312,7 @@ class TableHybRes  : public nana::form, public EditableForm
             auto &t = *i.table->_table.get();
             auto &v = *i.table->val;
 			auto &l = i.table->_list ;
-            ores<< t.TitRow(i.row)   ;
+            ores<< (i.table->_descr.pushed() ? t.TitRow(i.row)->Description() : t.TitRow(i.row)->Name() )   ;
                 
             if  (v.return_bg() )
                 for (int col=0; col< t.totalCol() ; ++col)
diff --git a/include/ThDy_DNAHybrid.Nana/main.Nana.h b/include/ThDy_DNAHybrid.Nana/main.Nana.h
index 658dc7b..e531912 100644
--- a/include/ThDy_DNAHybrid.Nana/main.Nana.h
+++ b/include/ThDy_DNAHybrid.Nana/main.Nana.h
@@ -13,7 +13,7 @@
 #ifndef main_nana_H
 #define main_nana_H
 
-#include <nana/gui/wvl.hpp>
+#include <nana/gui.hpp>
 #include <nana/gui/widgets/tabbar.hpp>
 
 #include "ThDy_programs/init_ThDy_prog_param.h"
diff --git a/include/ThDy_programs/init_ThDy_prog_param.h b/include/ThDy_programs/init_ThDy_prog_param.h
index fbd27e7..9e9ed0c 100644
--- a/include/ThDy_programs/init_ThDy_prog_param.h
+++ b/include/ThDy_programs/init_ThDy_prog_param.h
@@ -301,7 +301,8 @@ void Check_NNp_Targets (/*ThDyCommProgParam& cp*/)
 class CProgParam_microArray ;
 int microArrayProg   ( CProgParam_microArray   *IPrgPar_uArr )  ;
 
-template <typename Num> class CTable ;          //typedef uArr_RT CTable<TmGPos> ;
+template <typename Num, typename RowTitle> class CTable ;          //typedef uArr_RT CTable<TmGPos> ;
+using Table = CTable<TmGPos, std::shared_ptr<CSec    >>;
 
 class CEspThDyProgParam : public CEspProg
 {public:
@@ -321,7 +322,7 @@ class CProgParam_microArray : public CEspThDyProgParam
     CParamBool       _PrRecurDir    {this, "Recursively add all probe seq-files from all dir", "ProbRecDir", false} ;
     CParamBool       _PrDirStrOnly  {this, "Reproduce only the dir struct in probe"          , "ProbDirStr", true } ;
       
-    std::shared_ptr<CTable<TmGPos>> _rtbl ;		                //uArr_RT *_rtbl;
+    std::shared_ptr<Table> _rtbl ;		                //uArr_RT *_rtbl;
 
 	//bool			    _I, _G;			// Outpu table of I, G. 
 	//CParamBool		 I,  G;			// Outpu table of I, G. 
@@ -402,7 +403,7 @@ class CProgParam_MultiplexPCR : public CProgParam_microArray
 	int		Run		()   {	
                             return MultiplexPCRProg ( this )  ;
                          }
-    std::shared_ptr<CTable<TmGPos>> _rtbl_self ;		                //uArr_RT *_rtbl;
+    std::shared_ptr<Table> _rtbl_self ;		                //uArr_RT *_rtbl;
 };
 
 class CProgParam_SondeDesign ;
diff --git a/include/ThDy_programs/prog_comm_functions.h b/include/ThDy_programs/prog_comm_functions.h
index 1272e0b..cfbb0ac 100644
--- a/include/ThDy_programs/prog_comm_functions.h
+++ b/include/ThDy_programs/prog_comm_functions.h
@@ -50,7 +50,7 @@ inline void Hybrid(CSec &s, CSec &t, 	ThDyAlign &Al,  std::ofstream &osTm,
 														std::ofstream &osPl_Tm,
 														std::ofstream &osPl_G,
 														std::ofstream &osAl,
-														CTable<TmGPos> *_rtbl = nullptr	/*,
+														Table *_rtbl = nullptr	/*,
 														CTable<Temperature> *_tlTm = nullptr	,
 														CTable<Energy>	*tlG = nullptr,
 														CTable<SecPos> *tlPos  = nullptr*/);
@@ -62,7 +62,7 @@ void HybridPr(CMultSec &pr, CSec &t, 	ThDyAlign &Al,  std::ofstream &osTm,
 														std::ofstream &osPl_Tm,
 														std::ofstream &osPl_G,
 														std::ofstream &osAl,
-														CTable<TmGPos> *_rtbl = nullptr	/*,
+														Table *_rtbl = nullptr	/*,
 														CTable<Temperature> *_tlTm = nullptr	,
 														CTable<Energy>	*tlG = nullptr,
 														CTable<SecPos> *tlPos  = nullptr*/);
diff --git a/src/ThDySec/sec_mult.cpp b/src/ThDySec/sec_mult.cpp
index 865a2fe..0ae2944 100644
--- a/src/ThDySec/sec_mult.cpp
+++ b/src/ThDySec/sec_mult.cpp
@@ -46,21 +46,32 @@ fs::path unique_filename(fs::path name)
     }
     return name;
 }
-
-bool    CMultSec::Export_from   ( CMultSec& base, bool only_selected)  
+/// export all seq in this MSec in a file named as this tree-path.
+bool    CMultSec::Export_from   ( CMultSec& tree_base, bool only_selected)
 {
     fs::path dir, file;
-    auto s= path();
+    auto my_tree_path= path();
+    std::cout << "my_tree_path: " + my_tree_path << "\n";
 
-    for ( const auto& CurMSec : base.MSecL())        // recorre todos las msec
+    for ( const auto& CurMSec : tree_base.MSecL())           // recorre todos las msec to find what is my tree_base dir
     {    
-        auto b= CurMSec->path();
-        if ( b.empty() || s.find(b))  continue;    // found OK only if s begin with p
+        auto major_sub_tree_path= CurMSec->path();
+        std::cout << "major_sub_tree_path: " + major_sub_tree_path << "\n";       // like: 'All seq\Target seq\'
+        std::cout << "major_sub_tree_dir: " + CurMSec->_orig_file_path << "\n";   // like: '../ThDy/sequences/'
+
+                                                             // found OK only if my_tree_path begin with major_sub_tree_path
+        if ( major_sub_tree_path.empty() || my_tree_path.find(major_sub_tree_path))
+            continue;
 
-        file = dir = s.replace(0, b.length()-1, CurMSec->_Path);
-        file.remove_filename().replace_extension("fasta");
-        dir.remove_filename().remove_filename();
+                                                             // todo: find a robust solution for this hack: replace tree base with the original directory base.
+        file = dir = my_tree_path.replace(0, major_sub_tree_path.length()-1, CurMSec->_orig_file_path);
+        std::cout << "file: " + file.generic_string() << "\n";
+        file = file.parent_path().replace_extension("export.fasta");
+        std::cout << "file': " + file.generic_string() << "\n";
+        dir = file.parent_path();
+        std::cout << "dir': " + dir.generic_string() << "\n";
 
+        //if (!fs::is_regular_file(dir))
         fs::create_directories(dir);
         Export_as(unique_filename(file).string(), only_selected);
         return true;
@@ -75,7 +86,7 @@ bool      CMultSec::Export_local_seq   ( CMultSec& base, bool only_selected)
     auto s= path();
     auto b= base.path();
     if ( s.find(b))  return false;            // finded OK only if s beging with b
-    file = dir = s.replace(0, b.length(), base._Path);
+    file = dir = s.replace(0, b.length(), base._orig_file_path);
     file.replace_extension("fasta");
     dir.remove_filename();
 
@@ -98,7 +109,7 @@ CMultSec::CMultSec (    const std::string &path    ,
         _MaxTgId    (MaxTgId), 
         _SecLenLim  (SecLenLim),
         _NNPar      (NNpar)/*,
-        _Path       (file)*/
+        _orig_file_path       (file)*/
 {
     fs::path  itf(path);
 
@@ -108,7 +119,7 @@ CMultSec::CMultSec (    const std::string &path    ,
             itf.remove_filename();
 
         _name = itf.filename ().string();     // The new MSec take the name of the dir.
-        _Path = itf.string();                 // and the _Path point to it.
+        _orig_file_path = itf.string();                 // and the _orig_file_path point to it.
 
         fs::directory_iterator rdi{ itf }, end;
 
@@ -126,7 +137,7 @@ CMultSec::CMultSec (    const std::string &path    ,
         if (itf.has_filename())
         {
             _name = itf.filename ().string();     /// The new MSec take the name of the file.
-            _Path = itf.string();                 /// and the _Path point directly to the file.
+            _orig_file_path = itf.string();                 /// and the _Path point directly to the file.
             if (loadSec)
                AddFromFile(path);  /// will throw if not a file
             return;
diff --git a/src/ThDy_DNAHybrid.Nana/SeqExpl.cpp b/src/ThDy_DNAHybrid.Nana/SeqExpl.cpp
index 3315067..ff353fd 100644
--- a/src/ThDy_DNAHybrid.Nana/SeqExpl.cpp
+++ b/src/ThDy_DNAHybrid.Nana/SeqExpl.cpp
@@ -104,7 +104,7 @@ void SeqExpl::AddMenuItems(nana::menu& menu)
             CMultSec *pms = ms->_parentMS;
             assert(ms);
             assert(pms);
-            fs::path pt{ms->_Path};
+            fs::path pt{ms->_orig_file_path};
             pt= fs::canonical(pt).make_preferred();
             nana::filebox  fb{ *this, true };
             fb .add_filter ( SetupPage::FastaFiltre( )   )
@@ -131,7 +131,7 @@ void SeqExpl::AddMenuItems(nana::menu& menu)
             assert(ms);
             assert(pms);
             
-            fs::path pt{ms->_Path};
+            fs::path pt{ms->_orig_file_path};
             nana::folderbox  fb{ *this, pt.parent_path() , "Replace/reload a group of sequences from a directory" };
             auto p=fb.show();
             if (p.empty()) return;
@@ -219,7 +219,7 @@ void SeqExpl::MakeResponive()
                         {
                             auto      tn    = _tree.selected();
                             CMultSec* ms    = tn.value<CMultSec*>();
-                            fs::path pt{ms->_Path};
+                            fs::path pt{ms->_orig_file_path};
                             pt= fs::canonical(pt).make_preferred();
 
                             nana::filebox  fb{ *this, true };
@@ -240,7 +240,7 @@ void SeqExpl::MakeResponive()
                         {
                             auto tn= _tree.selected();
                             CMultSec *ms = tn.value<CMultSec*>();
-                            fs::path pt{ms->_Path};
+                            fs::path pt{ms->_orig_file_path};
                             nana::folderbox  fb{ *this, pt, "Directory load: Add a tree of groups of sequences from a directory" };
                             auto path=fb();
                             if (path.empty()) return;
@@ -253,7 +253,7 @@ void SeqExpl::MakeResponive()
                         {
                             auto tn= _tree.selected();
                             CMultSec *ms = tn.value<CMultSec*>();
-                            fs::path pt{ms->_Path};
+                            fs::path pt{ms->_orig_file_path};
                             nana::folderbox  fb{ *this, pt, "Directory scan: Reproduce the structure of directory..." };
                             auto path=fb();
                             if (path.empty()) return;
diff --git a/src/ThDy_DNAHybrid.Nana/main.Nana.cpp b/src/ThDy_DNAHybrid.Nana/main.Nana.cpp
index fb50b4e..f2f9ba8 100644
--- a/src/ThDy_DNAHybrid.Nana/main.Nana.cpp
+++ b/src/ThDy_DNAHybrid.Nana/main.Nana.cpp
@@ -25,25 +25,21 @@
 
  class About : public nana::form, public EditableForm
  {
-	 nana::label  copy_r{ *this, " Copyright (C) 2009-2018, Ariel Vina-Rodriguez ( arielvina@yahoo.es, <bold> qPCR4vir</> at <bold blue url=\"https://qpcr4vir.github.io/\"> GitHub</>)" };
+	 nana::group c_r {*this, "Author:"};
+     nana::label  copy_r{ c_r, " Copyright (C) 2009-2018, Ariel Vina-Rodriguez                ( arielvina@yahoo.es, <bold> qPCR4vir</> at <bold blue url=\"https://qpcr4vir.github.io/\"> GitHub</>)" };
+	 nana::label  comments{ c_r,R"(This work is mentioned in <bold blue url="https://epub.ub.uni-greifswald.de/frontdoor/deliver/index/docId/2175/file/VinaRodriguez.2018.Dissertation.pdf"> my PhD thesis </>.
 
+ Program distributed under the <bold blue url="https://www.gnu.org/licenses/"> GNU General Public License</>)" };
 
-	 nana::label  comments{ *this,R"(This work is mentioned in my PhD thesis at INNT-FLI.
-
-		 Program distributed under the GNU General Public License, see:
- https://www.gnu.org/licenses/)" };
-	 
-	 
-
-	 nana::label  compiled{ *this, R"(Compiled on:   )"  __DATE__   R"( / )"  __TIME__   R"(    Version: v0.02.01     )" };
-
-     nana::label  downloads{ *this, R"(Downloads and source code: https://github.com/qPCR4vir/ThDySec
-                       Wiki: https://github.com/qPCR4vir/ThDySec/wiki
+     nana::group build {*this, "Programm:"};
+     nana::label  compiled{ build, R"(Compiled on:   )"  __DATE__   R"( / )"  __TIME__   R"(    Version: v0.02.05     )" };
+     nana::label  downloads{ build, R"(Downloads and source code: <bold blue url="https://github.com/qPCR4vir/ThDySec"> github.com/qPCR4vir/ThDySec</>
+                                             <bold blue url=" https://github.com/qPCR4vir/ThDySec/wiki "> Wiki:</>
    ________________________________________________________________________________)" };
 
-     nana::label  GUI_lib{ *this, R"(Powered by Nana C++ GUI library:  http://nanapro.org/en-us/
-                                  Wiki:  https://github.com/qPCR4vir/nana-docs/wiki
-      Nana Version: 1.6.2 dev : https://github.com/qPCR4vir/nana/)" };
+     nana::label  GUI_lib{ build, R"(Powered by <bold blue url="http://nanapro.org/en-us/ "> Nana C++ GUI library:</>
+                                        <bold blue url="https://github.com/qPCR4vir/nana-docs/wiki"> Wiki:</>
+                      <bold blue url=" https://github.com/qPCR4vir/nana/">  Nana Version: 1.7.2 develop</>)" };
 
 
 	 
@@ -51,26 +47,44 @@
 	 
 
  public:
-	 About() : nana::form   ( nana::rectangle(nana::point(50, 5), nana::size(500, 350)) ),
+	 About() : nana::form   ( nana::rectangle(nana::point(50, 5), nana::size(510, 460)) ),
 	           EditableForm ( nullptr, *this, "About ThDy Hybrid" , "about.lay.txt") 
 	 {
-		 copy_r.format(true);
-			  // .caption(" Copyright (C) 2009-2018, Ariel Vina-Rodriguez ( arielvina@yahoo.es, <bold> qPCR4vir</> at <bold blue url=\"https://qpcr4vir.github.io/\"> GitHub</>)");
+         copy_r.format(true);
+         comments.format(true);
+         compiled.format(true);
+         GUI_lib.format(true);
+         downloads.format(true);
+         // .caption(" Copyright (C) 2009-2018, Ariel Vina-Rodriguez ( arielvina@yahoo.es, <bold> qPCR4vir</> at <bold blue url=\"https://qpcr4vir.github.io/\"> GitHub</>)");
 		 InitMyLayout();
-		 SelectClickableWidget(copy_r);
-		 bclose.events().click([&](){this->close();});
+		 SelectClickableWidget(c_r);
+         SelectClickableWidget(build);
+         SelectClickableWidget(copy_r);
+
+         bclose.events().click([&](){this->close();});
 	 }
 
  void SetDefLayout() override
 	 {
-		 _DefLayout = R"(vertical  gap=2 margin=2  
-                            <CR vfit=248 height=60 margin=[5,20,3,20] >  	
-                            <all vert  margin=[3,20,3,20] >)"	 ;
+		 _DefLayout = R"(
+< vertical     gap=5 margin=[3,20,3,20]
+      <CR     min=125 max=150 >
+      <all      min=170 max=200 >
+     < min=1  max=180>
+      <close  min=25  max=80>
+     < min=10  max=20>
+ >    )";
+		 c_r.div     (R"(vert< CR  vert vfit=290 height=60  gap=5 margin=[5,20,3,20] > )");
+         build.div   (R"(vert< all vert                     gap=5 margin=[3,20,3,20] > )");
 	 }
  void AsignWidgetToFields()
  {
-	 _place.field("all") << comments << compiled << downloads << GUI_lib << bclose ;
-	 _place["CR"] << copy_r;
+     _place["CR"]    << c_r  ;
+     _place["all"]   << build   ;
+     _place["close"] << bclose ;
+
+     c_r   ["CR" ] << copy_r   << comments;
+     build ["all"] << compiled << downloads << GUI_lib ;
  }
  };
 
@@ -188,8 +202,17 @@ int main(int argc, char *argv[])
 	_menuBar.at(2).append_splitter();
 	_menuBar.at(2).append("&About", [&](nana::menu::item_proxy& ip) 
 	{
-		About ab;
-		ab.modality();
+        try {
+            About ab;
+            ab.modality();
+        }
+        catch (std::exception e)
+        {
+            (nana::msgbox(*this, "Error in About !\n\t", nana::msgbox::button_t::ok)
+                    .icon(nana::msgbox::icon_information )
+                    << e.what()
+            ).show (  ) ;
+        }
 		//ab.show();
 	});
 
diff --git a/src/ThDy_programs/ThDy_microArray.cpp b/src/ThDy_programs/ThDy_microArray.cpp
index 8d02ba9..1b7becc 100644
--- a/src/ThDy_programs/ThDy_microArray.cpp
+++ b/src/ThDy_programs/ThDy_microArray.cpp
@@ -18,7 +18,7 @@
 //int microArrayProg ( CProgParam_microArray *IPrgPar_uArr, CMultSec &pr, CMultSec &tg, time_t t_0,  int MAxGrDegTg=1, const std::string of_x=""	);
 using namespace std; /// \todo temp?
 
-void	CreateColumns(CTable<TmGPos> &rtbl, CMultSec &pr, int MaxGrDeg, OutStr &os )
+void	CreateColumns(Table &rtbl, CMultSec &pr, int MaxGrDeg, OutStr &os )
 {
 	for (auto &CurSec : pr.SecL()) 			// recorre todos las sondas
 	{	CSec &s = *CurSec ;
@@ -59,7 +59,7 @@ void	CreateColumns(CTable<TmGPos> &rtbl, CMultSec &pr, int MaxGrDeg, OutStr &os
         CreateColumns(rtbl, *CurMSec,MaxGrDeg,os );
 }
 
-void	Hybrid(CTable<TmGPos> &rtbl, CMultSec &tg, CMultSec &pr, ThDyAlign	&Al, OutStr &os, int MAxGrDegTg=1)
+void	Hybrid(Table &rtbl, CMultSec &tg, CMultSec &pr, ThDyAlign	&Al, OutStr &os, int MAxGrDegTg=1)
 {
 	const std::string path =CMultSec::Path(&tg) 	 ;
 	for (auto &CurSec : tg.SecL())   /// recorre todos los targets
@@ -78,7 +78,7 @@ void	Hybrid(CTable<TmGPos> &rtbl, CMultSec &tg, CMultSec &pr, ThDyAlign	&Al, Out
 		os.Pos	<<endl<< name		;	
 		os.Pl_Tm<<endl<< name<<" \t";		
 		os.Pl_G	<<endl<< name<<" \t";		
-		rtbl.AddRow(t.Name());	
+		rtbl.AddRow(CurSec);
 		HybridPr (pr, t, 	Al, os.Tm, os.G,os.Pos,os.Pl_Tm,os.Pl_G,os.Al, &rtbl);
 	}
 	for (auto &CurMSec : tg.MSecL()) 	 
@@ -131,9 +131,9 @@ int microArrayProg ( CProgParam_microArray *IPrgPar_uArr,
 				osPl_Tm <<"Row_ID"	;	
 				osPl_G  <<"Row_ID"	;		
 
-	IPrgPar_uArr->_rtbl.reset( new	CTable<TmGPos> ( TableName/*,	tg->CountSelectedSeqRec(),
+	IPrgPar_uArr->_rtbl.reset( new	Table ( TableName/*,	tg->CountSelectedSeqRec(),
 																	pr->CountSelectedNDegSeqRec(MaxGrDeg)  */)  ); ;
-	CTable<TmGPos> &rtbl = *(  IPrgPar_uArr->_rtbl.get()  );
+	Table &rtbl = *(  IPrgPar_uArr->_rtbl.get()  );
 
 	// Primero creamos non deg set y el primer renglon de las tablas con el nombre de las sondas
 
diff --git a/src/ThDy_programs/init_thdy_prog_param.cpp b/src/ThDy_programs/init_thdy_prog_param.cpp
index 8f24324..316f3a7 100644
--- a/src/ThDy_programs/init_thdy_prog_param.cpp
+++ b/src/ThDy_programs/init_thdy_prog_param.cpp
@@ -80,12 +80,12 @@ CMultSec* ThDyCommProgParam::AddSeqFromFile( CMultSec           *parentGr,
                                 !onlyStructure);
 
 	parentGr->AddMultiSec(sG);
-    std::string parent_path = fs::path(sG->_Path).remove_filename().string();
+    std::string parent_path = fs::path(sG->_orig_file_path).remove_filename().string();
 
     if (parentGr->_Local._NMSec == 1)
-        parentGr->_Path= parent_path ;
-    else if (parentGr->_Path != parent_path)
-            parentGr->_Path.clear();
+        parentGr->_orig_file_path= parent_path ;
+    else if (parentGr->_orig_file_path != parent_path)
+            parentGr->_orig_file_path.clear();
 
 	return sG;
 }
diff --git a/src/ThDy_programs/prog_comm_functions.cpp b/src/ThDy_programs/prog_comm_functions.cpp
index 3ea8b4d..7f014bb 100644
--- a/src/ThDy_programs/prog_comm_functions.cpp
+++ b/src/ThDy_programs/prog_comm_functions.cpp
@@ -40,7 +40,7 @@ inline void Hybrid(CSec &s, CSec &t, 	ThDyAlign &Al,	ofstream &osTm,
 														ofstream &osPl_Tm,
 														ofstream &osPl_G,
 														ofstream &osAl,
-														CTable<TmGPos> *rtbl 	/*,
+														Table    *rtbl 	/*,
 														CTable<Temperature> *tlTm,
 														CTable<Energy>	*tlG,
 														CTable<SecPos> *tlPos*/)
@@ -66,7 +66,7 @@ void HybridPr(CMultSec &pr, CSec &t, 	ThDyAlign &Al,	ofstream &osTm,
 														ofstream &osPl_Tm,
 														ofstream &osPl_G,
 														ofstream &osAl,
-														CTable<TmGPos> *rtbl 	/*,
+														Table *rtbl 	/*,
 														CTable<Temperature> *tlTm,
 														CTable<Energy>	*tlG,
 														CTable<SecPos> *tlPos*/)