From 65bb70cfc24f262ad5227c38e1d4a2ae08ca174a Mon Sep 17 00:00:00 2001
From: Andy Lassiter <andrewl@wustl.edu>
Date: Thu, 19 Dec 2024 14:11:18 -0700
Subject: [PATCH] PIXI-157: Need to supply the url for patient derived tumors.

---
 .../resources/scripts/xnat/plugin/pixi/pixi-xenograft.js | 9 +++++----
 1 file changed, 5 insertions(+), 4 deletions(-)

diff --git a/src/main/resources/META-INF/resources/scripts/xnat/plugin/pixi/pixi-xenograft.js b/src/main/resources/META-INF/resources/scripts/xnat/plugin/pixi/pixi-xenograft.js
index c410b75..253d2d3 100644
--- a/src/main/resources/META-INF/resources/scripts/xnat/plugin/pixi/pixi-xenograft.js
+++ b/src/main/resources/META-INF/resources/scripts/xnat/plugin/pixi/pixi-xenograft.js
@@ -60,13 +60,14 @@ XNAT.plugin.pixi.pdxs = getObject(XNAT.plugin.pixi.pdxs || {});
     }
 
     class XenograftManager {
-        constructor(xenograftType) {
+        constructor(xenograftType, urlRoot) {
             this.xenograftType = xenograftType;
+            this.urlRoot = urlRoot;
             this.data = [];
         }
 
         url(append) {
-            let url = '/xapi/pixi/' + this.xenograftType.toLowerCase().replaceAll(/\s/g,'') + '/';
+            let url = this.urlRoot
             url = append ? url + append : url;
             return restUrl(url);
         }
@@ -354,7 +355,7 @@ XNAT.plugin.pixi.pdxs = getObject(XNAT.plugin.pixi.pdxs || {});
 
     class PDXManager extends XenograftManager {
         constructor() {
-            super('Patient-Derived Tumor');
+            super('Patient-Derived Tumor', '/xapi/pixi/pdx/');
         }
 
         getSpawnerElements() {
@@ -374,7 +375,7 @@ XNAT.plugin.pixi.pdxs = getObject(XNAT.plugin.pixi.pdxs || {});
 
     class CellLineManager extends XenograftManager {
         constructor() {
-            super('Cell Line');
+            super('Cell Line', '/xapi/pixi/cellline/');
         }
 
         getSpawnerElements() {